Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15740 and CA264_15745 are separated by 80 nucleotides CA264_15745 and CA264_15750 are separated by 409 nucleotides CA264_15750 and CA264_15755 are separated by 117 nucleotides CA264_15755 and CA264_15760 are separated by 428 nucleotides
CA264_15740: CA264_15740 - metal-dependent phosphohydrolase, at 3,677,649 to 3,678,881
_15740
CA264_15745: CA264_15745 - tRNA-Arg, at 3,678,962 to 3,679,036
_15745
CA264_15750: CA264_15750 - hypothetical protein, at 3,679,446 to 3,679,682
_15750
CA264_15755: CA264_15755 - hypothetical protein, at 3,679,800 to 3,680,165
_15755
CA264_15760: CA264_15760 - hypothetical protein, at 3,680,594 to 3,680,938
_15760
Position (kb)
3679
3680 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3678.456 kb on - strand, within CA264_15740 at 3678.459 kb on + strand, within CA264_15740 at 3678.460 kb on - strand, within CA264_15740 at 3678.543 kb on - strand, within CA264_15740 at 3678.551 kb on - strand, within CA264_15740 at 3678.738 kb on + strand, within CA264_15740 at 3678.762 kb on + strand at 3678.763 kb on - strand at 3678.770 kb on - strand at 3678.770 kb on - strand at 3678.813 kb on + strand at 3678.814 kb on - strand at 3678.818 kb on + strand at 3678.818 kb on + strand at 3678.818 kb on + strand at 3678.819 kb on - strand at 3678.819 kb on - strand at 3678.819 kb on - strand at 3678.819 kb on - strand at 3678.819 kb on - strand at 3678.819 kb on - strand at 3678.820 kb on + strand at 3678.820 kb on + strand at 3678.821 kb on - strand at 3678.821 kb on - strand at 3678.824 kb on + strand at 3678.880 kb on - strand at 3678.884 kb on + strand at 3678.885 kb on - strand at 3678.890 kb on + strand at 3678.893 kb on - strand at 3678.893 kb on - strand at 3678.893 kb on - strand at 3678.893 kb on - strand at 3678.925 kb on + strand at 3678.928 kb on + strand at 3678.929 kb on - strand at 3678.982 kb on - strand, within CA264_15745 at 3679.124 kb on - strand at 3679.142 kb on + strand at 3679.241 kb on + strand at 3679.241 kb on + strand at 3679.242 kb on - strand at 3679.298 kb on + strand at 3679.298 kb on + strand at 3679.298 kb on + strand at 3679.304 kb on - strand at 3679.304 kb on - strand at 3679.327 kb on - strand at 3679.327 kb on - strand at 3679.330 kb on + strand at 3679.331 kb on - strand at 3679.339 kb on + strand at 3679.345 kb on + strand at 3679.352 kb on + strand at 3679.353 kb on - strand at 3679.376 kb on - strand at 3679.380 kb on + strand at 3679.381 kb on - strand at 3679.390 kb on + strand at 3679.390 kb on + strand at 3679.391 kb on - strand at 3679.408 kb on + strand at 3679.414 kb on + strand at 3679.414 kb on + strand at 3679.421 kb on + strand at 3679.507 kb on + strand, within CA264_15750 at 3679.618 kb on + strand, within CA264_15750 at 3679.618 kb on + strand, within CA264_15750 at 3679.618 kb on + strand at 3679.619 kb on - strand, within CA264_15750 at 3679.619 kb on - strand, within CA264_15750 at 3679.619 kb on - strand, within CA264_15750 at 3679.623 kb on - strand, within CA264_15750 at 3679.641 kb on + strand, within CA264_15750 at 3679.699 kb on + strand at 3679.721 kb on - strand at 3679.739 kb on + strand at 3679.739 kb on + strand at 3679.775 kb on + strand at 3679.776 kb on - strand at 3679.779 kb on + strand at 3679.779 kb on + strand at 3679.779 kb on + strand at 3679.780 kb on - strand at 3679.791 kb on - strand at 3679.873 kb on + strand, within CA264_15755 at 3679.874 kb on - strand, within CA264_15755 at 3679.943 kb on + strand, within CA264_15755 at 3679.993 kb on - strand, within CA264_15755 at 3680.001 kb on + strand, within CA264_15755 at 3680.014 kb on + strand, within CA264_15755 at 3680.015 kb on - strand, within CA264_15755 at 3680.077 kb on + strand, within CA264_15755 at 3680.078 kb on - strand, within CA264_15755 at 3680.115 kb on + strand, within CA264_15755 at 3680.116 kb on - strand, within CA264_15755 at 3680.116 kb on - strand, within CA264_15755 at 3680.117 kb on + strand, within CA264_15755 at 3680.118 kb on - strand, within CA264_15755 at 3680.123 kb on - strand, within CA264_15755 at 3680.128 kb on + strand, within CA264_15755 at 3680.156 kb on - strand at 3680.177 kb on + strand at 3680.185 kb on + strand at 3680.186 kb on - strand at 3680.186 kb on - strand at 3680.254 kb on + strand at 3680.254 kb on + strand at 3680.255 kb on - strand at 3680.336 kb on + strand at 3680.338 kb on + strand at 3680.338 kb on + strand at 3680.339 kb on - strand at 3680.339 kb on - strand at 3680.367 kb on - strand at 3680.369 kb on - strand at 3680.382 kb on + strand at 3680.382 kb on + strand at 3680.420 kb on + strand at 3680.440 kb on + strand at 3680.473 kb on - strand at 3680.517 kb on + strand at 3680.537 kb on + strand at 3680.544 kb on - strand at 3680.561 kb on + strand at 3680.562 kb on - strand at 3680.562 kb on - strand at 3680.565 kb on + strand at 3680.565 kb on + strand at 3680.565 kb on + strand at 3680.566 kb on - strand at 3680.566 kb on - strand at 3680.566 kb on - strand at 3680.566 kb on - strand at 3680.566 kb on - strand at 3680.567 kb on + strand at 3680.568 kb on - strand at 3680.568 kb on - strand at 3680.568 kb on - strand at 3680.568 kb on - strand at 3680.570 kb on - strand at 3680.570 kb on - strand at 3680.575 kb on + strand at 3680.575 kb on + strand at 3680.575 kb on + strand at 3680.575 kb on + strand at 3680.575 kb on + strand at 3680.575 kb on + strand at 3680.575 kb on + strand at 3680.576 kb on - strand at 3680.576 kb on - strand at 3680.576 kb on - strand at 3680.587 kb on - strand at 3680.635 kb on - strand, within CA264_15760 at 3680.635 kb on - strand, within CA264_15760
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 3,678,456 - CA264_15740 0.65 +0.1 3,678,459 + CA264_15740 0.66 +0.0 3,678,460 - CA264_15740 0.66 -0.2 3,678,543 - CA264_15740 0.73 +1.0 3,678,551 - CA264_15740 0.73 -0.3 3,678,738 + CA264_15740 0.88 +0.0 3,678,762 + +0.9 3,678,763 - +0.0 3,678,770 - -0.0 3,678,770 - -0.6 3,678,813 + +0.0 3,678,814 - -0.9 3,678,818 + -0.3 3,678,818 + +0.3 3,678,818 + +1.8 3,678,819 - +0.4 3,678,819 - -1.1 3,678,819 - -0.8 3,678,819 - -0.4 3,678,819 - -0.4 3,678,819 - -0.2 3,678,820 + +0.2 3,678,820 + +0.6 3,678,821 - -0.3 3,678,821 - -1.3 3,678,824 + -0.5 3,678,880 - -1.1 3,678,884 + -0.1 3,678,885 - -0.9 3,678,890 + +0.8 3,678,893 - -0.2 3,678,893 - -0.5 3,678,893 - -0.4 3,678,893 - +0.9 3,678,925 + -0.8 3,678,928 + -0.7 3,678,929 - -0.7 3,678,982 - CA264_15745 0.27 -0.3 3,679,124 - -0.6 3,679,142 + +0.6 3,679,241 + -0.8 3,679,241 + +0.2 3,679,242 - +0.6 3,679,298 + -0.6 3,679,298 + +0.3 3,679,298 + -0.4 3,679,304 - -0.2 3,679,304 - -0.1 3,679,327 - -0.9 3,679,327 - -2.2 3,679,330 + +0.9 3,679,331 - -1.3 3,679,339 + -0.3 3,679,345 + -0.6 3,679,352 + -1.0 3,679,353 - -0.0 3,679,376 - -0.8 3,679,380 + +0.6 3,679,381 - +0.4 3,679,390 + -0.0 3,679,390 + -0.7 3,679,391 - -1.4 3,679,408 + +1.0 3,679,414 + +0.4 3,679,414 + -0.5 3,679,421 + -1.5 3,679,507 + CA264_15750 0.26 -0.2 3,679,618 + CA264_15750 0.73 -0.3 3,679,618 + CA264_15750 0.73 -0.5 3,679,618 + +2.2 3,679,619 - CA264_15750 0.73 -0.7 3,679,619 - CA264_15750 0.73 -1.6 3,679,619 - CA264_15750 0.73 +0.0 3,679,623 - CA264_15750 0.75 +0.3 3,679,641 + CA264_15750 0.82 -0.6 3,679,699 + +0.3 3,679,721 - +0.0 3,679,739 + -0.6 3,679,739 + -0.6 3,679,775 + +1.1 3,679,776 - -0.7 3,679,779 + -1.2 3,679,779 + -0.4 3,679,779 + -0.3 3,679,780 - +0.0 3,679,791 - -1.1 3,679,873 + CA264_15755 0.20 +0.4 3,679,874 - CA264_15755 0.20 +0.1 3,679,943 + CA264_15755 0.39 +0.2 3,679,993 - CA264_15755 0.53 -0.6 3,680,001 + CA264_15755 0.55 +0.0 3,680,014 + CA264_15755 0.58 +0.6 3,680,015 - CA264_15755 0.59 -0.1 3,680,077 + CA264_15755 0.76 +0.4 3,680,078 - CA264_15755 0.76 -0.1 3,680,115 + CA264_15755 0.86 -0.1 3,680,116 - CA264_15755 0.86 +0.3 3,680,116 - CA264_15755 0.86 -0.6 3,680,117 + CA264_15755 0.87 -0.9 3,680,118 - CA264_15755 0.87 -0.1 3,680,123 - CA264_15755 0.88 -0.9 3,680,128 + CA264_15755 0.90 -0.3 3,680,156 - +0.4 3,680,177 + -0.3 3,680,185 + +0.4 3,680,186 - -0.4 3,680,186 - +0.6 3,680,254 + +0.2 3,680,254 + -0.1 3,680,255 - -0.3 3,680,336 + +2.2 3,680,338 + +0.4 3,680,338 + -0.8 3,680,339 - -0.3 3,680,339 - -0.2 3,680,367 - -0.7 3,680,369 - +0.4 3,680,382 + -0.8 3,680,382 + +0.4 3,680,420 + +0.7 3,680,440 + +0.0 3,680,473 - -0.4 3,680,517 + -0.1 3,680,537 + -0.2 3,680,544 - -0.8 3,680,561 + +0.3 3,680,562 - +0.1 3,680,562 - -0.8 3,680,565 + -0.0 3,680,565 + -0.1 3,680,565 + +0.9 3,680,566 - -0.4 3,680,566 - +0.2 3,680,566 - -0.3 3,680,566 - -1.0 3,680,566 - -0.6 3,680,567 + -0.5 3,680,568 - +1.2 3,680,568 - -0.4 3,680,568 - +1.4 3,680,568 - -1.5 3,680,570 - +0.9 3,680,570 - +0.0 3,680,575 + +0.2 3,680,575 + +0.2 3,680,575 + +0.4 3,680,575 + -0.5 3,680,575 + +1.0 3,680,575 + +0.1 3,680,575 + +0.6 3,680,576 - +0.0 3,680,576 - +0.6 3,680,576 - -1.2 3,680,587 - -0.1 3,680,635 - CA264_15760 0.12 -0.4 3,680,635 - CA264_15760 0.12 -0.4
Or see this region's nucleotide sequence