Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15575 and CA264_15580 are separated by 110 nucleotides CA264_15580 and CA264_15585 are separated by 80 nucleotides CA264_15585 and CA264_15590 are separated by 178 nucleotides CA264_15590 and CA264_15595 are separated by 89 nucleotides
CA264_15575: CA264_15575 - hypothetical protein, at 3,644,172 to 3,644,435
_15575
CA264_15580: CA264_15580 - phospholipase, at 3,644,546 to 3,645,169
_15580
CA264_15585: CA264_15585 - short-chain dehydrogenase, at 3,645,250 to 3,646,050
_15585
CA264_15590: CA264_15590 - metal-dependent hydrolase, at 3,646,229 to 3,646,762
_15590
CA264_15595: CA264_15595 - hypothetical protein, at 3,646,852 to 3,647,805
_15595
Position (kb)
3645
3646
3647 Strain fitness (log2 ratio)
-2
-1
0
1 at 3644.283 kb on + strand, within CA264_15575 at 3644.300 kb on - strand, within CA264_15575 at 3644.306 kb on + strand, within CA264_15575 at 3644.306 kb on + strand, within CA264_15575 at 3644.322 kb on - strand, within CA264_15575 at 3644.322 kb on - strand, within CA264_15575 at 3644.332 kb on + strand, within CA264_15575 at 3644.444 kb on + strand at 3644.502 kb on + strand at 3644.555 kb on + strand at 3644.571 kb on - strand at 3644.571 kb on - strand at 3644.687 kb on - strand, within CA264_15580 at 3644.687 kb on - strand, within CA264_15580 at 3644.687 kb on - strand, within CA264_15580 at 3644.691 kb on - strand, within CA264_15580 at 3644.691 kb on - strand, within CA264_15580 at 3644.805 kb on + strand, within CA264_15580 at 3644.842 kb on - strand, within CA264_15580 at 3644.905 kb on - strand, within CA264_15580 at 3644.931 kb on + strand, within CA264_15580 at 3644.997 kb on + strand, within CA264_15580 at 3644.997 kb on + strand, within CA264_15580 at 3644.997 kb on + strand, within CA264_15580 at 3645.061 kb on - strand, within CA264_15580 at 3645.066 kb on + strand, within CA264_15580 at 3645.067 kb on - strand, within CA264_15580 at 3645.105 kb on - strand, within CA264_15580 at 3645.122 kb on + strand at 3645.122 kb on + strand at 3645.122 kb on + strand at 3645.123 kb on - strand at 3645.132 kb on + strand at 3645.238 kb on - strand at 3645.307 kb on + strand at 3645.359 kb on - strand, within CA264_15585 at 3645.561 kb on - strand, within CA264_15585 at 3645.561 kb on - strand, within CA264_15585 at 3645.590 kb on + strand, within CA264_15585 at 3645.591 kb on - strand, within CA264_15585 at 3645.591 kb on - strand, within CA264_15585 at 3645.875 kb on + strand, within CA264_15585 at 3645.877 kb on + strand, within CA264_15585 at 3645.878 kb on - strand, within CA264_15585 at 3645.878 kb on - strand, within CA264_15585 at 3645.882 kb on + strand, within CA264_15585 at 3645.883 kb on - strand, within CA264_15585 at 3645.883 kb on - strand, within CA264_15585 at 3645.884 kb on + strand, within CA264_15585 at 3645.884 kb on + strand, within CA264_15585 at 3645.885 kb on - strand, within CA264_15585 at 3645.943 kb on + strand, within CA264_15585 at 3645.943 kb on + strand, within CA264_15585 at 3646.026 kb on - strand at 3646.086 kb on + strand at 3646.087 kb on - strand at 3646.087 kb on - strand at 3646.088 kb on + strand at 3646.088 kb on + strand at 3646.089 kb on - strand at 3646.089 kb on - strand at 3646.102 kb on + strand at 3646.139 kb on - strand at 3646.140 kb on + strand at 3646.141 kb on - strand at 3646.144 kb on + strand at 3646.144 kb on + strand at 3646.144 kb on + strand at 3646.144 kb on + strand at 3646.145 kb on - strand at 3646.168 kb on + strand at 3646.184 kb on + strand at 3646.245 kb on - strand at 3646.348 kb on - strand, within CA264_15590 at 3646.348 kb on - strand, within CA264_15590 at 3646.509 kb on + strand, within CA264_15590 at 3646.688 kb on + strand, within CA264_15590 at 3646.760 kb on + strand at 3646.760 kb on + strand at 3646.761 kb on - strand at 3646.761 kb on - strand at 3646.765 kb on + strand at 3646.766 kb on - strand at 3646.766 kb on - strand at 3646.766 kb on - strand at 3646.766 kb on - strand at 3646.766 kb on - strand at 3646.817 kb on - strand at 3646.999 kb on - strand, within CA264_15595 at 3646.999 kb on - strand, within CA264_15595 at 3647.044 kb on - strand, within CA264_15595
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 3,644,283 + CA264_15575 0.42 +0.0 3,644,300 - CA264_15575 0.48 +0.5 3,644,306 + CA264_15575 0.51 +0.0 3,644,306 + CA264_15575 0.51 -0.4 3,644,322 - CA264_15575 0.57 +0.1 3,644,322 - CA264_15575 0.57 +0.3 3,644,332 + CA264_15575 0.61 -0.6 3,644,444 + -0.6 3,644,502 + -0.3 3,644,555 + +0.6 3,644,571 - -0.5 3,644,571 - -1.2 3,644,687 - CA264_15580 0.23 -0.7 3,644,687 - CA264_15580 0.23 +0.4 3,644,687 - CA264_15580 0.23 +0.9 3,644,691 - CA264_15580 0.23 +0.8 3,644,691 - CA264_15580 0.23 -0.3 3,644,805 + CA264_15580 0.42 -0.5 3,644,842 - CA264_15580 0.47 -1.5 3,644,905 - CA264_15580 0.58 -0.5 3,644,931 + CA264_15580 0.62 -0.6 3,644,997 + CA264_15580 0.72 +0.4 3,644,997 + CA264_15580 0.72 -0.6 3,644,997 + CA264_15580 0.72 -0.5 3,645,061 - CA264_15580 0.83 -0.1 3,645,066 + CA264_15580 0.83 +0.4 3,645,067 - CA264_15580 0.83 -0.8 3,645,105 - CA264_15580 0.90 -0.7 3,645,122 + +0.6 3,645,122 + -0.2 3,645,122 + +0.2 3,645,123 - -1.4 3,645,132 + -0.3 3,645,238 - -0.2 3,645,307 + +0.2 3,645,359 - CA264_15585 0.14 -0.4 3,645,561 - CA264_15585 0.39 -0.0 3,645,561 - CA264_15585 0.39 -1.3 3,645,590 + CA264_15585 0.42 +0.1 3,645,591 - CA264_15585 0.43 -0.0 3,645,591 - CA264_15585 0.43 -0.6 3,645,875 + CA264_15585 0.78 -0.2 3,645,877 + CA264_15585 0.78 -0.3 3,645,878 - CA264_15585 0.78 -1.5 3,645,878 - CA264_15585 0.78 -0.3 3,645,882 + CA264_15585 0.79 -0.3 3,645,883 - CA264_15585 0.79 +0.3 3,645,883 - CA264_15585 0.79 -1.7 3,645,884 + CA264_15585 0.79 +0.5 3,645,884 + CA264_15585 0.79 -0.4 3,645,885 - CA264_15585 0.79 +0.3 3,645,943 + CA264_15585 0.87 -0.1 3,645,943 + CA264_15585 0.87 -0.6 3,646,026 - -0.5 3,646,086 + -1.8 3,646,087 - -0.6 3,646,087 - -1.6 3,646,088 + -1.8 3,646,088 + -2.6 3,646,089 - -0.3 3,646,089 - +0.1 3,646,102 + +1.2 3,646,139 - -0.7 3,646,140 + -0.1 3,646,141 - +0.0 3,646,144 + +1.2 3,646,144 + +0.2 3,646,144 + -1.1 3,646,144 + -0.3 3,646,145 - +0.5 3,646,168 + +0.2 3,646,184 + -0.0 3,646,245 - -0.5 3,646,348 - CA264_15590 0.22 -0.2 3,646,348 - CA264_15590 0.22 +1.7 3,646,509 + CA264_15590 0.52 +0.6 3,646,688 + CA264_15590 0.86 -0.3 3,646,760 + -0.3 3,646,760 + +0.2 3,646,761 - -0.0 3,646,761 - +0.6 3,646,765 + +0.5 3,646,766 - -0.7 3,646,766 - +0.4 3,646,766 - +1.5 3,646,766 - +0.2 3,646,766 - +1.0 3,646,817 - +0.2 3,646,999 - CA264_15595 0.15 -0.1 3,646,999 - CA264_15595 0.15 -0.4 3,647,044 - CA264_15595 0.20 -0.2
Or see this region's nucleotide sequence