Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15180 and CA264_15185 are separated by 194 nucleotides CA264_15185 and CA264_15190 are separated by 121 nucleotides CA264_15190 and CA264_15195 overlap by 11 nucleotides
CA264_15180: CA264_15180 - energy transducer TonB, at 3,557,333 to 3,558,163
_15180
CA264_15185: CA264_15185 - hypothetical protein, at 3,558,358 to 3,559,194
_15185
CA264_15190: CA264_15190 - hypothetical protein, at 3,559,316 to 3,559,573
_15190
CA264_15195: CA264_15195 - phosphate ABC transporter substrate-binding protein, PhoT family, at 3,559,563 to 3,560,504
_15195
Position (kb)
3558
3559
3560 Strain fitness (log2 ratio)
-1
0
1 at 3557.408 kb on + strand at 3557.660 kb on - strand, within CA264_15180 at 3557.838 kb on + strand, within CA264_15180 at 3557.857 kb on + strand, within CA264_15180 at 3557.857 kb on + strand, within CA264_15180 at 3557.861 kb on + strand, within CA264_15180 at 3557.977 kb on - strand, within CA264_15180 at 3558.161 kb on + strand at 3558.247 kb on + strand at 3558.250 kb on + strand at 3558.251 kb on - strand at 3558.251 kb on - strand at 3558.255 kb on - strand at 3558.327 kb on + strand at 3558.373 kb on + strand at 3558.377 kb on + strand at 3558.452 kb on - strand, within CA264_15185 at 3558.462 kb on + strand, within CA264_15185 at 3558.493 kb on - strand, within CA264_15185 at 3558.556 kb on + strand, within CA264_15185 at 3558.571 kb on + strand, within CA264_15185 at 3558.571 kb on + strand, within CA264_15185 at 3558.571 kb on + strand, within CA264_15185 at 3558.571 kb on + strand, within CA264_15185 at 3558.572 kb on - strand, within CA264_15185 at 3558.572 kb on - strand, within CA264_15185 at 3558.590 kb on - strand, within CA264_15185 at 3558.606 kb on + strand, within CA264_15185 at 3558.892 kb on + strand, within CA264_15185 at 3558.892 kb on + strand, within CA264_15185 at 3558.892 kb on + strand, within CA264_15185 at 3558.893 kb on - strand, within CA264_15185 at 3559.198 kb on + strand at 3559.198 kb on + strand at 3559.321 kb on + strand at 3559.322 kb on - strand at 3559.322 kb on - strand at 3559.461 kb on + strand, within CA264_15190 at 3559.478 kb on + strand, within CA264_15190 at 3559.479 kb on - strand, within CA264_15190 at 3559.500 kb on + strand, within CA264_15190 at 3559.505 kb on + strand, within CA264_15190 at 3559.506 kb on - strand, within CA264_15190 at 3559.533 kb on - strand, within CA264_15190 at 3559.533 kb on - strand, within CA264_15190 at 3559.562 kb on + strand at 3559.563 kb on - strand at 3559.613 kb on - strand at 3559.735 kb on - strand, within CA264_15195 at 3559.916 kb on + strand, within CA264_15195 at 3560.102 kb on + strand, within CA264_15195 at 3560.102 kb on + strand, within CA264_15195 at 3560.103 kb on - strand, within CA264_15195 at 3560.103 kb on - strand, within CA264_15195 at 3560.103 kb on - strand, within CA264_15195 at 3560.103 kb on - strand, within CA264_15195 at 3560.129 kb on + strand, within CA264_15195 at 3560.154 kb on + strand, within CA264_15195 at 3560.155 kb on - strand, within CA264_15195
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 3,557,408 + -1.3 3,557,660 - CA264_15180 0.39 +0.4 3,557,838 + CA264_15180 0.61 -1.0 3,557,857 + CA264_15180 0.63 -1.4 3,557,857 + CA264_15180 0.63 -0.2 3,557,861 + CA264_15180 0.64 -1.3 3,557,977 - CA264_15180 0.77 -0.8 3,558,161 + -0.7 3,558,247 + +0.2 3,558,250 + +0.6 3,558,251 - -0.1 3,558,251 - -1.1 3,558,255 - -0.1 3,558,327 + -1.3 3,558,373 + -1.2 3,558,377 + -0.2 3,558,452 - CA264_15185 0.11 -0.6 3,558,462 + CA264_15185 0.12 +0.1 3,558,493 - CA264_15185 0.16 -1.0 3,558,556 + CA264_15185 0.24 -0.2 3,558,571 + CA264_15185 0.25 -0.4 3,558,571 + CA264_15185 0.25 -0.3 3,558,571 + CA264_15185 0.25 -1.0 3,558,571 + CA264_15185 0.25 +0.6 3,558,572 - CA264_15185 0.26 -0.1 3,558,572 - CA264_15185 0.26 -0.5 3,558,590 - CA264_15185 0.28 +0.0 3,558,606 + CA264_15185 0.30 -0.5 3,558,892 + CA264_15185 0.64 -1.5 3,558,892 + CA264_15185 0.64 -0.2 3,558,892 + CA264_15185 0.64 +1.2 3,558,893 - CA264_15185 0.64 -0.5 3,559,198 + -0.2 3,559,198 + +0.1 3,559,321 + -0.4 3,559,322 - -0.6 3,559,322 - -0.8 3,559,461 + CA264_15190 0.56 +0.1 3,559,478 + CA264_15190 0.63 +0.2 3,559,479 - CA264_15190 0.63 -0.5 3,559,500 + CA264_15190 0.71 +1.2 3,559,505 + CA264_15190 0.73 +0.2 3,559,506 - CA264_15190 0.74 -0.2 3,559,533 - CA264_15190 0.84 -0.5 3,559,533 - CA264_15190 0.84 +0.7 3,559,562 + +0.2 3,559,563 - -0.4 3,559,613 - +0.0 3,559,735 - CA264_15195 0.18 -1.5 3,559,916 + CA264_15195 0.37 -1.4 3,560,102 + CA264_15195 0.57 -1.2 3,560,102 + CA264_15195 0.57 -1.1 3,560,103 - CA264_15195 0.57 -1.3 3,560,103 - CA264_15195 0.57 +0.8 3,560,103 - CA264_15195 0.57 -1.2 3,560,103 - CA264_15195 0.57 -0.8 3,560,129 + CA264_15195 0.60 -1.5 3,560,154 + CA264_15195 0.63 +1.2 3,560,155 - CA264_15195 0.63 -0.5
Or see this region's nucleotide sequence