Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14945 and CA264_14950 overlap by 26 nucleotides CA264_14950 and CA264_14955 are separated by 19 nucleotides CA264_14955 and CA264_14960 are separated by 81 nucleotides CA264_14960 and CA264_14965 are separated by 249 nucleotides
CA264_14945: CA264_14945 - RNA polymerase subunit sigma-24, at 3,509,996 to 3,510,598
_14945
CA264_14950: CA264_14950 - hypothetical protein, at 3,510,573 to 3,510,803
_14950
CA264_14955: CA264_14955 - endonuclease III, at 3,510,823 to 3,511,509
_14955
CA264_14960: CA264_14960 - hypothetical protein, at 3,511,591 to 3,512,070
_14960
CA264_14965: CA264_14965 - glycosyltransferase WbuB, at 3,512,320 to 3,513,516
_14965
Position (kb)
3510
3511
3512 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3509.865 kb on - strand at 3509.889 kb on - strand at 3509.900 kb on + strand at 3509.900 kb on + strand at 3509.956 kb on + strand at 3509.956 kb on + strand at 3509.956 kb on + strand at 3509.957 kb on - strand at 3509.963 kb on + strand at 3509.971 kb on + strand at 3509.972 kb on - strand at 3510.031 kb on - strand at 3510.076 kb on - strand, within CA264_14945 at 3510.076 kb on - strand, within CA264_14945 at 3510.101 kb on + strand, within CA264_14945 at 3510.102 kb on - strand, within CA264_14945 at 3510.110 kb on - strand, within CA264_14945 at 3510.114 kb on + strand, within CA264_14945 at 3510.134 kb on + strand, within CA264_14945 at 3510.181 kb on + strand, within CA264_14945 at 3510.181 kb on + strand, within CA264_14945 at 3510.517 kb on + strand, within CA264_14945 at 3510.577 kb on + strand at 3510.587 kb on + strand at 3510.609 kb on + strand, within CA264_14950 at 3510.610 kb on - strand, within CA264_14950 at 3510.610 kb on - strand, within CA264_14950 at 3510.610 kb on - strand, within CA264_14950 at 3510.613 kb on + strand, within CA264_14950 at 3510.613 kb on + strand, within CA264_14950 at 3510.613 kb on + strand, within CA264_14950 at 3510.614 kb on - strand, within CA264_14950 at 3510.614 kb on - strand, within CA264_14950 at 3510.614 kb on - strand, within CA264_14950 at 3510.662 kb on + strand, within CA264_14950 at 3510.663 kb on - strand, within CA264_14950 at 3510.663 kb on - strand, within CA264_14950 at 3510.663 kb on - strand, within CA264_14950 at 3510.679 kb on + strand, within CA264_14950 at 3510.718 kb on + strand, within CA264_14950 at 3510.787 kb on + strand at 3510.802 kb on - strand at 3510.998 kb on - strand, within CA264_14955 at 3510.998 kb on - strand, within CA264_14955 at 3511.021 kb on - strand, within CA264_14955 at 3511.148 kb on + strand, within CA264_14955 at 3511.160 kb on + strand, within CA264_14955 at 3511.197 kb on + strand, within CA264_14955 at 3511.277 kb on + strand, within CA264_14955 at 3511.489 kb on - strand at 3511.580 kb on - strand at 3511.615 kb on - strand at 3511.654 kb on - strand, within CA264_14960 at 3511.821 kb on + strand, within CA264_14960 at 3511.970 kb on - strand, within CA264_14960 at 3512.030 kb on - strand at 3512.053 kb on + strand at 3512.053 kb on + strand at 3512.054 kb on - strand at 3512.079 kb on - strand at 3512.086 kb on + strand at 3512.087 kb on - strand at 3512.091 kb on - strand at 3512.202 kb on - strand at 3512.461 kb on + strand, within CA264_14965 at 3512.462 kb on - strand, within CA264_14965 at 3512.490 kb on + strand, within CA264_14965 at 3512.492 kb on + strand, within CA264_14965 at 3512.492 kb on + strand, within CA264_14965 at 3512.493 kb on - strand, within CA264_14965
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 3,509,865 - -0.4 3,509,889 - -0.0 3,509,900 + +0.2 3,509,900 + +1.7 3,509,956 + +2.6 3,509,956 + +0.6 3,509,956 + -0.3 3,509,957 - -0.2 3,509,963 + +0.2 3,509,971 + -1.8 3,509,972 - +0.4 3,510,031 - -0.7 3,510,076 - CA264_14945 0.13 -0.1 3,510,076 - CA264_14945 0.13 +0.2 3,510,101 + CA264_14945 0.17 -0.3 3,510,102 - CA264_14945 0.18 -0.7 3,510,110 - CA264_14945 0.19 -0.8 3,510,114 + CA264_14945 0.20 -1.0 3,510,134 + CA264_14945 0.23 -1.3 3,510,181 + CA264_14945 0.31 -0.5 3,510,181 + CA264_14945 0.31 -0.9 3,510,517 + CA264_14945 0.86 +0.5 3,510,577 + -0.3 3,510,587 + -1.7 3,510,609 + CA264_14950 0.16 -0.5 3,510,610 - CA264_14950 0.16 +0.4 3,510,610 - CA264_14950 0.16 -0.2 3,510,610 - CA264_14950 0.16 -0.3 3,510,613 + CA264_14950 0.17 -1.4 3,510,613 + CA264_14950 0.17 -0.5 3,510,613 + CA264_14950 0.17 -0.0 3,510,614 - CA264_14950 0.18 +0.2 3,510,614 - CA264_14950 0.18 -0.1 3,510,614 - CA264_14950 0.18 +0.1 3,510,662 + CA264_14950 0.39 +0.5 3,510,663 - CA264_14950 0.39 -0.0 3,510,663 - CA264_14950 0.39 +0.0 3,510,663 - CA264_14950 0.39 -0.1 3,510,679 + CA264_14950 0.46 -0.5 3,510,718 + CA264_14950 0.63 -0.8 3,510,787 + +0.2 3,510,802 - +0.4 3,510,998 - CA264_14955 0.25 -1.5 3,510,998 - CA264_14955 0.25 +0.2 3,511,021 - CA264_14955 0.29 -0.1 3,511,148 + CA264_14955 0.47 -1.0 3,511,160 + CA264_14955 0.49 +0.4 3,511,197 + CA264_14955 0.54 -0.2 3,511,277 + CA264_14955 0.66 -0.5 3,511,489 - +1.2 3,511,580 - +0.7 3,511,615 - +0.6 3,511,654 - CA264_14960 0.13 -0.2 3,511,821 + CA264_14960 0.48 +0.1 3,511,970 - CA264_14960 0.79 -0.1 3,512,030 - -0.3 3,512,053 + -0.5 3,512,053 + +0.2 3,512,054 - +0.4 3,512,079 - -0.4 3,512,086 + -0.0 3,512,087 - -2.4 3,512,091 - +0.0 3,512,202 - +0.3 3,512,461 + CA264_14965 0.12 -0.0 3,512,462 - CA264_14965 0.12 -0.4 3,512,490 + CA264_14965 0.14 -0.3 3,512,492 + CA264_14965 0.14 -0.2 3,512,492 + CA264_14965 0.14 +0.8 3,512,493 - CA264_14965 0.14 -0.9
Or see this region's nucleotide sequence