Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13965 and CA264_13970 are separated by 94 nucleotides CA264_13970 and CA264_13975 are separated by 541 nucleotides
CA264_13965: CA264_13965 - SusC/RagA family TonB-linked outer membrane protein, at 3,264,688 to 3,267,837
_13965
CA264_13970: CA264_13970 - glycosyl hydrolase, at 3,267,932 to 3,270,109
_13970
CA264_13975: CA264_13975 - LacI family transcriptional regulator, at 3,270,651 to 3,271,694
_13975
Position (kb)
3267
3268
3269
3270
3271 Strain fitness (log2 ratio)
-1
0
1
2 at 3267.014 kb on + strand, within CA264_13965 at 3267.054 kb on - strand, within CA264_13965 at 3267.058 kb on - strand, within CA264_13965 at 3267.136 kb on - strand, within CA264_13965 at 3267.136 kb on - strand, within CA264_13965 at 3267.136 kb on - strand, within CA264_13965 at 3267.136 kb on - strand, within CA264_13965 at 3267.357 kb on + strand, within CA264_13965 at 3267.443 kb on + strand, within CA264_13965 at 3267.493 kb on + strand, within CA264_13965 at 3267.548 kb on + strand at 3267.549 kb on - strand at 3267.549 kb on - strand at 3267.549 kb on - strand at 3267.553 kb on - strand at 3267.553 kb on - strand at 3267.557 kb on - strand at 3267.565 kb on - strand at 3267.594 kb on - strand at 3267.594 kb on - strand at 3267.665 kb on - strand at 3267.724 kb on + strand at 3267.747 kb on - strand at 3267.790 kb on + strand at 3267.837 kb on + strand at 3267.844 kb on + strand at 3267.867 kb on + strand at 3267.876 kb on + strand at 3267.934 kb on - strand at 3267.934 kb on - strand at 3268.192 kb on - strand, within CA264_13970 at 3268.317 kb on + strand, within CA264_13970 at 3268.342 kb on - strand, within CA264_13970 at 3268.389 kb on + strand, within CA264_13970 at 3268.389 kb on + strand, within CA264_13970 at 3268.390 kb on - strand, within CA264_13970 at 3268.509 kb on + strand, within CA264_13970 at 3268.567 kb on + strand, within CA264_13970 at 3268.577 kb on + strand, within CA264_13970 at 3268.579 kb on + strand, within CA264_13970 at 3268.600 kb on + strand, within CA264_13970 at 3268.671 kb on + strand, within CA264_13970 at 3268.821 kb on + strand, within CA264_13970 at 3268.821 kb on + strand, within CA264_13970 at 3268.822 kb on - strand, within CA264_13970 at 3268.868 kb on + strand, within CA264_13970 at 3268.896 kb on + strand, within CA264_13970 at 3268.896 kb on + strand, within CA264_13970 at 3268.897 kb on - strand, within CA264_13970 at 3268.899 kb on + strand, within CA264_13970 at 3268.950 kb on + strand, within CA264_13970 at 3269.058 kb on - strand, within CA264_13970 at 3269.207 kb on + strand, within CA264_13970 at 3269.290 kb on + strand, within CA264_13970 at 3269.292 kb on + strand, within CA264_13970 at 3269.292 kb on + strand, within CA264_13970 at 3269.293 kb on - strand, within CA264_13970 at 3269.335 kb on + strand, within CA264_13970 at 3269.335 kb on + strand, within CA264_13970 at 3269.412 kb on + strand, within CA264_13970 at 3269.412 kb on + strand, within CA264_13970 at 3269.412 kb on + strand, within CA264_13970 at 3269.413 kb on - strand, within CA264_13970 at 3269.423 kb on + strand, within CA264_13970 at 3269.423 kb on + strand, within CA264_13970 at 3269.469 kb on + strand, within CA264_13970 at 3269.547 kb on + strand, within CA264_13970 at 3269.632 kb on + strand, within CA264_13970 at 3269.632 kb on + strand, within CA264_13970 at 3269.637 kb on + strand, within CA264_13970 at 3269.763 kb on + strand, within CA264_13970 at 3269.763 kb on + strand, within CA264_13970 at 3269.763 kb on + strand, within CA264_13970 at 3269.763 kb on + strand, within CA264_13970 at 3269.764 kb on - strand, within CA264_13970 at 3269.764 kb on - strand, within CA264_13970 at 3269.764 kb on - strand, within CA264_13970 at 3269.764 kb on - strand, within CA264_13970 at 3269.764 kb on - strand, within CA264_13970 at 3269.803 kb on + strand, within CA264_13970 at 3269.879 kb on + strand, within CA264_13970 at 3270.095 kb on + strand at 3270.185 kb on - strand at 3270.209 kb on + strand at 3270.465 kb on - strand at 3270.465 kb on - strand at 3270.664 kb on + strand at 3270.664 kb on + strand at 3270.677 kb on + strand at 3270.678 kb on - strand at 3270.678 kb on - strand at 3270.716 kb on + strand at 3270.716 kb on + strand at 3270.856 kb on + strand, within CA264_13975 at 3270.872 kb on + strand, within CA264_13975 at 3270.927 kb on + strand, within CA264_13975 at 3270.940 kb on + strand, within CA264_13975 at 3271.048 kb on + strand, within CA264_13975
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 3,267,014 + CA264_13965 0.74 -0.2 3,267,054 - CA264_13965 0.75 +0.0 3,267,058 - CA264_13965 0.75 -0.5 3,267,136 - CA264_13965 0.78 -1.1 3,267,136 - CA264_13965 0.78 -0.9 3,267,136 - CA264_13965 0.78 +0.6 3,267,136 - CA264_13965 0.78 -0.2 3,267,357 + CA264_13965 0.85 -0.9 3,267,443 + CA264_13965 0.87 -0.4 3,267,493 + CA264_13965 0.89 -0.4 3,267,548 + +1.5 3,267,549 - +0.7 3,267,549 - +1.3 3,267,549 - -0.4 3,267,553 - -1.1 3,267,553 - +0.1 3,267,557 - +0.2 3,267,565 - +1.0 3,267,594 - -0.5 3,267,594 - -0.1 3,267,665 - -0.0 3,267,724 + +0.6 3,267,747 - +0.3 3,267,790 + -0.2 3,267,837 + -1.0 3,267,844 + +0.3 3,267,867 + -1.1 3,267,876 + -0.1 3,267,934 - +0.0 3,267,934 - -0.8 3,268,192 - CA264_13970 0.12 -1.1 3,268,317 + CA264_13970 0.18 -0.2 3,268,342 - CA264_13970 0.19 +0.8 3,268,389 + CA264_13970 0.21 -0.5 3,268,389 + CA264_13970 0.21 +0.1 3,268,390 - CA264_13970 0.21 -0.9 3,268,509 + CA264_13970 0.26 -0.2 3,268,567 + CA264_13970 0.29 -0.4 3,268,577 + CA264_13970 0.30 -1.0 3,268,579 + CA264_13970 0.30 +0.4 3,268,600 + CA264_13970 0.31 -0.2 3,268,671 + CA264_13970 0.34 +0.9 3,268,821 + CA264_13970 0.41 +0.1 3,268,821 + CA264_13970 0.41 -0.3 3,268,822 - CA264_13970 0.41 -0.2 3,268,868 + CA264_13970 0.43 -0.7 3,268,896 + CA264_13970 0.44 +0.9 3,268,896 + CA264_13970 0.44 -1.1 3,268,897 - CA264_13970 0.44 -0.1 3,268,899 + CA264_13970 0.44 -0.4 3,268,950 + CA264_13970 0.47 -0.3 3,269,058 - CA264_13970 0.52 +0.9 3,269,207 + CA264_13970 0.59 -0.8 3,269,290 + CA264_13970 0.62 +0.2 3,269,292 + CA264_13970 0.62 -1.4 3,269,292 + CA264_13970 0.62 +0.2 3,269,293 - CA264_13970 0.62 -0.2 3,269,335 + CA264_13970 0.64 +1.0 3,269,335 + CA264_13970 0.64 +0.4 3,269,412 + CA264_13970 0.68 +0.3 3,269,412 + CA264_13970 0.68 +0.4 3,269,412 + CA264_13970 0.68 -0.1 3,269,413 - CA264_13970 0.68 -0.0 3,269,423 + CA264_13970 0.68 +1.1 3,269,423 + CA264_13970 0.68 +1.1 3,269,469 + CA264_13970 0.71 +0.5 3,269,547 + CA264_13970 0.74 +0.5 3,269,632 + CA264_13970 0.78 +0.5 3,269,632 + CA264_13970 0.78 +1.9 3,269,637 + CA264_13970 0.78 +0.9 3,269,763 + CA264_13970 0.84 +0.8 3,269,763 + CA264_13970 0.84 +0.5 3,269,763 + CA264_13970 0.84 +1.3 3,269,763 + CA264_13970 0.84 +0.8 3,269,764 - CA264_13970 0.84 -0.1 3,269,764 - CA264_13970 0.84 -0.5 3,269,764 - CA264_13970 0.84 +0.3 3,269,764 - CA264_13970 0.84 +0.2 3,269,764 - CA264_13970 0.84 +1.3 3,269,803 + CA264_13970 0.86 +0.8 3,269,879 + CA264_13970 0.89 +1.2 3,270,095 + +1.0 3,270,185 - +0.5 3,270,209 + +1.0 3,270,465 - -0.3 3,270,465 - +0.1 3,270,664 + +0.3 3,270,664 + +0.5 3,270,677 + +0.9 3,270,678 - +0.9 3,270,678 - -0.0 3,270,716 + +0.4 3,270,716 + -0.4 3,270,856 + CA264_13975 0.20 +1.3 3,270,872 + CA264_13975 0.21 -0.3 3,270,927 + CA264_13975 0.26 +0.0 3,270,940 + CA264_13975 0.28 +0.4 3,271,048 + CA264_13975 0.38 +0.7
Or see this region's nucleotide sequence