Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13440 and CA264_13445 are separated by 71 nucleotides
CA264_13440: CA264_13440 - hypothetical protein, at 3,136,028 to 3,137,110
_13440
CA264_13445: CA264_13445 - TonB-dependent receptor, at 3,137,182 to 3,139,752
_13445
Position (kb)
3137
3138
3139
3140 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3136.213 kb on - strand, within CA264_13440 at 3136.246 kb on + strand, within CA264_13440 at 3136.270 kb on + strand, within CA264_13440 at 3136.352 kb on - strand, within CA264_13440 at 3136.369 kb on + strand, within CA264_13440 at 3136.474 kb on + strand, within CA264_13440 at 3136.488 kb on + strand, within CA264_13440 at 3136.489 kb on - strand, within CA264_13440 at 3136.491 kb on + strand, within CA264_13440 at 3136.497 kb on + strand, within CA264_13440 at 3136.498 kb on - strand, within CA264_13440 at 3136.502 kb on + strand, within CA264_13440 at 3136.502 kb on + strand, within CA264_13440 at 3136.502 kb on + strand, within CA264_13440 at 3136.502 kb on + strand, within CA264_13440 at 3136.503 kb on - strand, within CA264_13440 at 3136.503 kb on - strand, within CA264_13440 at 3136.503 kb on - strand, within CA264_13440 at 3136.503 kb on - strand, within CA264_13440 at 3136.503 kb on - strand, within CA264_13440 at 3136.506 kb on + strand, within CA264_13440 at 3136.507 kb on - strand, within CA264_13440 at 3136.507 kb on - strand, within CA264_13440 at 3136.609 kb on + strand, within CA264_13440 at 3136.649 kb on - strand, within CA264_13440 at 3136.670 kb on - strand, within CA264_13440 at 3136.716 kb on + strand, within CA264_13440 at 3136.717 kb on - strand, within CA264_13440 at 3136.728 kb on - strand, within CA264_13440 at 3136.807 kb on + strand, within CA264_13440 at 3136.855 kb on - strand, within CA264_13440 at 3136.898 kb on - strand, within CA264_13440 at 3136.913 kb on - strand, within CA264_13440 at 3137.004 kb on + strand at 3137.018 kb on - strand at 3137.047 kb on + strand at 3137.047 kb on + strand at 3137.048 kb on - strand at 3137.087 kb on + strand at 3137.157 kb on - strand at 3137.173 kb on - strand at 3137.238 kb on + strand at 3137.321 kb on + strand at 3137.322 kb on - strand at 3137.440 kb on + strand, within CA264_13445 at 3137.441 kb on - strand, within CA264_13445 at 3137.495 kb on + strand, within CA264_13445 at 3137.495 kb on + strand, within CA264_13445 at 3137.538 kb on - strand, within CA264_13445 at 3137.695 kb on - strand, within CA264_13445 at 3137.706 kb on + strand, within CA264_13445 at 3137.718 kb on + strand, within CA264_13445 at 3137.724 kb on + strand, within CA264_13445 at 3137.726 kb on + strand, within CA264_13445 at 3137.853 kb on - strand, within CA264_13445 at 3137.911 kb on - strand, within CA264_13445 at 3138.141 kb on + strand, within CA264_13445 at 3138.236 kb on + strand, within CA264_13445 at 3138.237 kb on - strand, within CA264_13445 at 3138.303 kb on - strand, within CA264_13445 at 3138.351 kb on - strand, within CA264_13445 at 3138.351 kb on - strand, within CA264_13445 at 3138.411 kb on + strand, within CA264_13445 at 3138.412 kb on - strand, within CA264_13445 at 3138.425 kb on + strand, within CA264_13445 at 3138.458 kb on + strand, within CA264_13445 at 3138.550 kb on + strand, within CA264_13445 at 3138.594 kb on - strand, within CA264_13445 at 3138.635 kb on + strand, within CA264_13445 at 3138.643 kb on - strand, within CA264_13445 at 3138.844 kb on - strand, within CA264_13445 at 3138.866 kb on + strand, within CA264_13445 at 3138.966 kb on + strand, within CA264_13445 at 3138.967 kb on - strand, within CA264_13445 at 3139.026 kb on + strand, within CA264_13445 at 3139.026 kb on + strand, within CA264_13445 at 3139.026 kb on + strand, within CA264_13445 at 3139.204 kb on + strand, within CA264_13445 at 3139.280 kb on + strand, within CA264_13445 at 3139.280 kb on + strand, within CA264_13445 at 3139.414 kb on + strand, within CA264_13445 at 3139.437 kb on + strand, within CA264_13445 at 3139.517 kb on + strand at 3139.517 kb on + strand at 3139.517 kb on + strand at 3139.517 kb on + strand at 3139.517 kb on + strand at 3139.526 kb on - strand at 3139.553 kb on - strand at 3139.585 kb on - strand at 3139.609 kb on + strand at 3139.746 kb on - strand at 3139.765 kb on - strand at 3139.809 kb on - strand at 3139.900 kb on + strand at 3139.975 kb on - strand at 3140.307 kb on + strand at 3140.308 kb on - strand at 3140.308 kb on - strand at 3140.308 kb on - strand at 3140.312 kb on + strand at 3140.317 kb on + strand at 3140.317 kb on + strand at 3140.318 kb on - strand at 3140.320 kb on - strand at 3140.320 kb on - strand at 3140.321 kb on + strand at 3140.322 kb on - strand at 3140.437 kb on - strand at 3140.449 kb on + strand at 3140.450 kb on - strand at 3140.630 kb on - strand at 3140.733 kb on + strand at 3140.752 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 3,136,213 - CA264_13440 0.17 -0.5 3,136,246 + CA264_13440 0.20 -0.3 3,136,270 + CA264_13440 0.22 -0.3 3,136,352 - CA264_13440 0.30 -2.0 3,136,369 + CA264_13440 0.31 -0.4 3,136,474 + CA264_13440 0.41 -0.0 3,136,488 + CA264_13440 0.42 +0.3 3,136,489 - CA264_13440 0.43 -0.6 3,136,491 + CA264_13440 0.43 -1.5 3,136,497 + CA264_13440 0.43 -0.4 3,136,498 - CA264_13440 0.43 +0.1 3,136,502 + CA264_13440 0.44 -1.1 3,136,502 + CA264_13440 0.44 +0.9 3,136,502 + CA264_13440 0.44 -0.7 3,136,502 + CA264_13440 0.44 +0.2 3,136,503 - CA264_13440 0.44 -2.3 3,136,503 - CA264_13440 0.44 -1.0 3,136,503 - CA264_13440 0.44 -0.8 3,136,503 - CA264_13440 0.44 -0.1 3,136,503 - CA264_13440 0.44 -0.6 3,136,506 + CA264_13440 0.44 -0.2 3,136,507 - CA264_13440 0.44 -0.7 3,136,507 - CA264_13440 0.44 -0.4 3,136,609 + CA264_13440 0.54 -1.0 3,136,649 - CA264_13440 0.57 -0.6 3,136,670 - CA264_13440 0.59 -0.8 3,136,716 + CA264_13440 0.64 -0.5 3,136,717 - CA264_13440 0.64 -0.0 3,136,728 - CA264_13440 0.65 -1.4 3,136,807 + CA264_13440 0.72 -1.5 3,136,855 - CA264_13440 0.76 +0.1 3,136,898 - CA264_13440 0.80 +0.9 3,136,913 - CA264_13440 0.82 -0.4 3,137,004 + -0.2 3,137,018 - -0.8 3,137,047 + -0.4 3,137,047 + -1.4 3,137,048 - +0.0 3,137,087 + +2.2 3,137,157 - +1.6 3,137,173 - +0.0 3,137,238 + +1.2 3,137,321 + -1.0 3,137,322 - -0.6 3,137,440 + CA264_13445 0.10 -0.5 3,137,441 - CA264_13445 0.10 -0.1 3,137,495 + CA264_13445 0.12 -1.4 3,137,495 + CA264_13445 0.12 -0.1 3,137,538 - CA264_13445 0.14 -0.4 3,137,695 - CA264_13445 0.20 -0.6 3,137,706 + CA264_13445 0.20 -1.0 3,137,718 + CA264_13445 0.21 -0.3 3,137,724 + CA264_13445 0.21 -0.6 3,137,726 + CA264_13445 0.21 -0.4 3,137,853 - CA264_13445 0.26 -0.7 3,137,911 - CA264_13445 0.28 -0.5 3,138,141 + CA264_13445 0.37 -0.9 3,138,236 + CA264_13445 0.41 +0.1 3,138,237 - CA264_13445 0.41 -0.1 3,138,303 - CA264_13445 0.44 -0.4 3,138,351 - CA264_13445 0.45 -0.3 3,138,351 - CA264_13445 0.45 -0.4 3,138,411 + CA264_13445 0.48 -1.3 3,138,412 - CA264_13445 0.48 -1.0 3,138,425 + CA264_13445 0.48 -0.2 3,138,458 + CA264_13445 0.50 -0.5 3,138,550 + CA264_13445 0.53 -0.2 3,138,594 - CA264_13445 0.55 +0.2 3,138,635 + CA264_13445 0.57 -0.4 3,138,643 - CA264_13445 0.57 +1.5 3,138,844 - CA264_13445 0.65 -0.3 3,138,866 + CA264_13445 0.65 -0.8 3,138,966 + CA264_13445 0.69 -1.0 3,138,967 - CA264_13445 0.69 +1.5 3,139,026 + CA264_13445 0.72 +0.2 3,139,026 + CA264_13445 0.72 -0.3 3,139,026 + CA264_13445 0.72 -0.9 3,139,204 + CA264_13445 0.79 +0.3 3,139,280 + CA264_13445 0.82 -0.0 3,139,280 + CA264_13445 0.82 -0.7 3,139,414 + CA264_13445 0.87 -1.0 3,139,437 + CA264_13445 0.88 -1.0 3,139,517 + -0.7 3,139,517 + -0.1 3,139,517 + -0.5 3,139,517 + -0.9 3,139,517 + -0.7 3,139,526 - +0.9 3,139,553 - -0.4 3,139,585 - -0.6 3,139,609 + -0.4 3,139,746 - -0.2 3,139,765 - -1.5 3,139,809 - -0.4 3,139,900 + -0.7 3,139,975 - +0.4 3,140,307 + +0.5 3,140,308 - +0.0 3,140,308 - -0.3 3,140,308 - -0.2 3,140,312 + +0.1 3,140,317 + +0.4 3,140,317 + +0.6 3,140,318 - +0.6 3,140,320 - +0.3 3,140,320 - +0.9 3,140,321 + -0.2 3,140,322 - +0.7 3,140,437 - +0.6 3,140,449 + +0.4 3,140,450 - +0.7 3,140,630 - +0.1 3,140,733 + +1.0 3,140,752 + +0.1
Or see this region's nucleotide sequence