Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13110 and CA264_13115 are separated by 271 nucleotides CA264_13115 and CA264_13120 are separated by 163 nucleotides CA264_13120 and CA264_13125 are separated by 100 nucleotides
CA264_13110: CA264_13110 - 3-deoxy-7-phosphoheptulonate synthase, at 3,057,965 to 3,059,062
_13110
CA264_13115: CA264_13115 - proline dehydrogenase, at 3,059,334 to 3,060,521
_13115
CA264_13120: CA264_13120 - hypothetical protein, at 3,060,685 to 3,060,924
_13120
CA264_13125: CA264_13125 - RNA polymerase subunit sigma-70, at 3,061,025 to 3,061,597
_13125
Position (kb)
3059
3060
3061 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3058.525 kb on - strand, within CA264_13110 at 3058.540 kb on - strand, within CA264_13110 at 3058.559 kb on + strand, within CA264_13110 at 3058.709 kb on + strand, within CA264_13110 at 3058.914 kb on - strand, within CA264_13110 at 3059.045 kb on - strand at 3059.083 kb on + strand at 3059.084 kb on - strand at 3059.084 kb on - strand at 3059.115 kb on - strand at 3059.173 kb on + strand at 3059.193 kb on + strand at 3059.209 kb on + strand at 3059.209 kb on + strand at 3059.224 kb on - strand at 3059.255 kb on - strand at 3059.324 kb on + strand at 3059.324 kb on + strand at 3059.325 kb on - strand at 3059.325 kb on - strand at 3059.327 kb on + strand at 3059.327 kb on + strand at 3059.349 kb on - strand at 3059.405 kb on - strand at 3059.405 kb on - strand at 3059.405 kb on - strand at 3059.405 kb on - strand at 3059.408 kb on + strand at 3059.409 kb on - strand at 3059.415 kb on + strand at 3059.416 kb on - strand at 3059.416 kb on - strand at 3059.416 kb on - strand at 3059.426 kb on + strand at 3059.426 kb on + strand at 3059.427 kb on - strand at 3059.596 kb on - strand, within CA264_13115 at 3059.614 kb on + strand, within CA264_13115 at 3059.729 kb on + strand, within CA264_13115 at 3059.928 kb on + strand, within CA264_13115 at 3059.929 kb on - strand, within CA264_13115 at 3059.946 kb on + strand, within CA264_13115 at 3059.949 kb on - strand, within CA264_13115 at 3059.970 kb on + strand, within CA264_13115 at 3059.970 kb on + strand, within CA264_13115 at 3059.971 kb on - strand, within CA264_13115 at 3059.971 kb on - strand, within CA264_13115 at 3059.976 kb on - strand, within CA264_13115 at 3059.979 kb on + strand, within CA264_13115 at 3059.979 kb on + strand, within CA264_13115 at 3059.979 kb on + strand, within CA264_13115 at 3059.979 kb on + strand, within CA264_13115 at 3059.980 kb on - strand, within CA264_13115 at 3059.980 kb on - strand, within CA264_13115 at 3059.980 kb on - strand, within CA264_13115 at 3059.989 kb on - strand, within CA264_13115 at 3060.051 kb on + strand, within CA264_13115 at 3060.051 kb on + strand, within CA264_13115 at 3060.081 kb on + strand, within CA264_13115 at 3060.081 kb on + strand, within CA264_13115 at 3060.121 kb on - strand, within CA264_13115 at 3060.199 kb on + strand, within CA264_13115 at 3060.200 kb on - strand, within CA264_13115 at 3060.247 kb on - strand, within CA264_13115 at 3060.304 kb on - strand, within CA264_13115 at 3060.304 kb on - strand, within CA264_13115 at 3060.342 kb on + strand, within CA264_13115 at 3060.342 kb on + strand, within CA264_13115 at 3060.343 kb on - strand, within CA264_13115 at 3060.364 kb on - strand, within CA264_13115 at 3060.378 kb on + strand, within CA264_13115 at 3060.378 kb on + strand, within CA264_13115 at 3060.378 kb on + strand, within CA264_13115 at 3060.379 kb on - strand, within CA264_13115 at 3060.654 kb on + strand at 3060.661 kb on + strand at 3060.677 kb on - strand at 3060.681 kb on - strand at 3060.851 kb on - strand, within CA264_13120 at 3060.940 kb on - strand at 3061.062 kb on + strand at 3061.062 kb on + strand at 3061.062 kb on + strand at 3061.128 kb on + strand, within CA264_13125 at 3061.139 kb on - strand, within CA264_13125 at 3061.182 kb on - strand, within CA264_13125 at 3061.216 kb on - strand, within CA264_13125 at 3061.256 kb on + strand, within CA264_13125 at 3061.262 kb on + strand, within CA264_13125 at 3061.262 kb on + strand, within CA264_13125 at 3061.340 kb on - strand, within CA264_13125 at 3061.347 kb on + strand, within CA264_13125 at 3061.458 kb on - strand, within CA264_13125 at 3061.460 kb on + strand, within CA264_13125 at 3061.460 kb on + strand, within CA264_13125 at 3061.464 kb on + strand, within CA264_13125 at 3061.464 kb on + strand, within CA264_13125 at 3061.465 kb on - strand, within CA264_13125 at 3061.506 kb on - strand, within CA264_13125
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 3,058,525 - CA264_13110 0.51 +0.2 3,058,540 - CA264_13110 0.52 +0.4 3,058,559 + CA264_13110 0.54 -0.1 3,058,709 + CA264_13110 0.68 -0.4 3,058,914 - CA264_13110 0.86 -0.8 3,059,045 - +1.8 3,059,083 + -0.5 3,059,084 - -1.3 3,059,084 - -1.6 3,059,115 - -1.9 3,059,173 + -1.6 3,059,193 + -2.0 3,059,209 + -2.6 3,059,209 + -1.4 3,059,224 - -1.9 3,059,255 - -1.1 3,059,324 + -0.2 3,059,324 + -2.2 3,059,325 - -1.2 3,059,325 - -1.1 3,059,327 + -0.6 3,059,327 + -1.1 3,059,349 - -0.8 3,059,405 - -0.0 3,059,405 - -0.7 3,059,405 - -0.8 3,059,405 - -1.4 3,059,408 + -0.7 3,059,409 - -1.3 3,059,415 + -1.2 3,059,416 - -1.4 3,059,416 - -1.5 3,059,416 - -2.2 3,059,426 + -0.4 3,059,426 + -1.6 3,059,427 - -1.4 3,059,596 - CA264_13115 0.22 -1.3 3,059,614 + CA264_13115 0.24 -0.4 3,059,729 + CA264_13115 0.33 -0.3 3,059,928 + CA264_13115 0.50 -1.7 3,059,929 - CA264_13115 0.50 -1.5 3,059,946 + CA264_13115 0.52 +0.9 3,059,949 - CA264_13115 0.52 -1.0 3,059,970 + CA264_13115 0.54 -0.4 3,059,970 + CA264_13115 0.54 -1.4 3,059,971 - CA264_13115 0.54 -2.5 3,059,971 - CA264_13115 0.54 -1.4 3,059,976 - CA264_13115 0.54 -1.0 3,059,979 + CA264_13115 0.54 -1.9 3,059,979 + CA264_13115 0.54 -1.1 3,059,979 + CA264_13115 0.54 +0.4 3,059,979 + CA264_13115 0.54 -1.3 3,059,980 - CA264_13115 0.54 -0.8 3,059,980 - CA264_13115 0.54 -2.5 3,059,980 - CA264_13115 0.54 -1.4 3,059,989 - CA264_13115 0.55 -1.2 3,060,051 + CA264_13115 0.60 +0.2 3,060,051 + CA264_13115 0.60 -0.7 3,060,081 + CA264_13115 0.63 -1.1 3,060,081 + CA264_13115 0.63 -1.2 3,060,121 - CA264_13115 0.66 +1.0 3,060,199 + CA264_13115 0.73 -1.0 3,060,200 - CA264_13115 0.73 -2.2 3,060,247 - CA264_13115 0.77 -1.0 3,060,304 - CA264_13115 0.82 -1.0 3,060,304 - CA264_13115 0.82 -1.2 3,060,342 + CA264_13115 0.85 -1.4 3,060,342 + CA264_13115 0.85 -2.0 3,060,343 - CA264_13115 0.85 -1.3 3,060,364 - CA264_13115 0.87 -1.5 3,060,378 + CA264_13115 0.88 -0.1 3,060,378 + CA264_13115 0.88 -0.5 3,060,378 + CA264_13115 0.88 -1.4 3,060,379 - CA264_13115 0.88 -1.6 3,060,654 + -0.5 3,060,661 + +1.0 3,060,677 - +0.1 3,060,681 - +0.2 3,060,851 - CA264_13120 0.69 -1.1 3,060,940 - -0.4 3,061,062 + -0.4 3,061,062 + +0.3 3,061,062 + -0.2 3,061,128 + CA264_13125 0.18 -0.6 3,061,139 - CA264_13125 0.20 -1.4 3,061,182 - CA264_13125 0.27 +0.2 3,061,216 - CA264_13125 0.33 -0.0 3,061,256 + CA264_13125 0.40 -1.3 3,061,262 + CA264_13125 0.41 -1.4 3,061,262 + CA264_13125 0.41 +0.5 3,061,340 - CA264_13125 0.55 -0.1 3,061,347 + CA264_13125 0.56 -1.0 3,061,458 - CA264_13125 0.76 +1.1 3,061,460 + CA264_13125 0.76 -0.2 3,061,460 + CA264_13125 0.76 +0.6 3,061,464 + CA264_13125 0.77 -0.1 3,061,464 + CA264_13125 0.77 -1.4 3,061,465 - CA264_13125 0.77 -0.6 3,061,506 - CA264_13125 0.84 -0.1
Or see this region's nucleotide sequence