Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12820 and CA264_12825 are separated by 64 nucleotides CA264_12825 and CA264_12830 are separated by 163 nucleotides
CA264_12820: CA264_12820 - hypothetical protein, at 2,988,591 to 2,989,745
_12820
CA264_12825: CA264_12825 - hypothetical protein, at 2,989,810 to 2,991,480
_12825
CA264_12830: CA264_12830 - hypothetical protein, at 2,991,644 to 2,993,305
_12830
Position (kb)
2989
2990
2991
2992 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2988.825 kb on - strand, within CA264_12820 at 2988.842 kb on - strand, within CA264_12820 at 2988.849 kb on + strand, within CA264_12820 at 2988.850 kb on - strand, within CA264_12820 at 2988.850 kb on - strand, within CA264_12820 at 2989.068 kb on - strand, within CA264_12820 at 2989.095 kb on + strand, within CA264_12820 at 2989.123 kb on + strand, within CA264_12820 at 2989.124 kb on - strand, within CA264_12820 at 2989.127 kb on + strand, within CA264_12820 at 2989.127 kb on + strand, within CA264_12820 at 2989.132 kb on + strand, within CA264_12820 at 2989.132 kb on + strand, within CA264_12820 at 2989.132 kb on + strand, within CA264_12820 at 2989.133 kb on - strand, within CA264_12820 at 2989.133 kb on - strand, within CA264_12820 at 2989.185 kb on - strand, within CA264_12820 at 2989.195 kb on + strand, within CA264_12820 at 2989.195 kb on + strand, within CA264_12820 at 2989.195 kb on + strand, within CA264_12820 at 2989.196 kb on - strand, within CA264_12820 at 2989.235 kb on - strand, within CA264_12820 at 2989.290 kb on - strand, within CA264_12820 at 2989.304 kb on + strand, within CA264_12820 at 2989.322 kb on + strand, within CA264_12820 at 2989.375 kb on + strand, within CA264_12820 at 2989.410 kb on + strand, within CA264_12820 at 2989.410 kb on + strand, within CA264_12820 at 2989.411 kb on - strand, within CA264_12820 at 2989.504 kb on + strand, within CA264_12820 at 2989.504 kb on + strand, within CA264_12820 at 2989.562 kb on - strand, within CA264_12820 at 2989.696 kb on + strand at 2989.735 kb on + strand at 2989.748 kb on + strand at 2989.749 kb on - strand at 2989.749 kb on - strand at 2989.783 kb on + strand at 2989.817 kb on + strand at 2989.818 kb on - strand at 2989.821 kb on - strand at 2989.833 kb on + strand at 2989.865 kb on + strand at 2989.940 kb on - strand at 2989.996 kb on + strand, within CA264_12825 at 2990.017 kb on + strand, within CA264_12825 at 2990.017 kb on + strand, within CA264_12825 at 2990.018 kb on - strand, within CA264_12825 at 2990.018 kb on - strand, within CA264_12825 at 2990.018 kb on - strand, within CA264_12825 at 2990.018 kb on - strand, within CA264_12825 at 2990.018 kb on - strand, within CA264_12825 at 2990.019 kb on + strand, within CA264_12825 at 2990.069 kb on + strand, within CA264_12825 at 2990.069 kb on + strand, within CA264_12825 at 2990.074 kb on - strand, within CA264_12825 at 2990.074 kb on - strand, within CA264_12825 at 2990.121 kb on + strand, within CA264_12825 at 2990.135 kb on + strand, within CA264_12825 at 2990.225 kb on + strand, within CA264_12825 at 2990.327 kb on + strand, within CA264_12825 at 2990.360 kb on + strand, within CA264_12825 at 2990.360 kb on + strand, within CA264_12825 at 2990.361 kb on - strand, within CA264_12825 at 2990.536 kb on - strand, within CA264_12825 at 2990.610 kb on + strand, within CA264_12825 at 2990.636 kb on + strand, within CA264_12825 at 2990.637 kb on - strand, within CA264_12825 at 2990.637 kb on - strand, within CA264_12825 at 2990.661 kb on - strand, within CA264_12825 at 2990.719 kb on + strand, within CA264_12825 at 2990.719 kb on + strand, within CA264_12825 at 2990.720 kb on - strand, within CA264_12825 at 2990.720 kb on - strand, within CA264_12825 at 2990.723 kb on - strand, within CA264_12825 at 2990.816 kb on - strand, within CA264_12825 at 2990.816 kb on - strand, within CA264_12825 at 2990.851 kb on + strand, within CA264_12825 at 2990.851 kb on + strand, within CA264_12825 at 2990.852 kb on - strand, within CA264_12825 at 2990.852 kb on - strand, within CA264_12825 at 2990.852 kb on - strand, within CA264_12825 at 2990.946 kb on + strand, within CA264_12825 at 2990.980 kb on + strand, within CA264_12825 at 2990.981 kb on - strand, within CA264_12825 at 2990.981 kb on - strand, within CA264_12825 at 2990.981 kb on - strand, within CA264_12825 at 2990.981 kb on - strand, within CA264_12825 at 2990.983 kb on - strand, within CA264_12825 at 2990.984 kb on + strand, within CA264_12825 at 2991.026 kb on + strand, within CA264_12825 at 2991.026 kb on + strand, within CA264_12825 at 2991.026 kb on + strand, within CA264_12825 at 2991.027 kb on - strand, within CA264_12825 at 2991.478 kb on + strand at 2991.485 kb on - strand at 2991.499 kb on + strand at 2991.505 kb on + strand at 2991.506 kb on - strand at 2991.510 kb on + strand at 2991.542 kb on + strand at 2991.583 kb on + strand at 2991.583 kb on + strand at 2991.583 kb on + strand at 2991.583 kb on + strand at 2991.583 kb on + strand at 2991.584 kb on - strand at 2991.590 kb on + strand at 2991.590 kb on + strand at 2991.590 kb on + strand at 2991.652 kb on - strand at 2991.664 kb on + strand at 2991.665 kb on - strand at 2991.738 kb on + strand at 2991.762 kb on - strand at 2991.762 kb on - strand at 2991.778 kb on + strand at 2991.820 kb on + strand, within CA264_12830 at 2991.821 kb on - strand, within CA264_12830 at 2991.822 kb on + strand, within CA264_12830 at 2991.850 kb on - strand, within CA264_12830 at 2991.852 kb on - strand, within CA264_12830 at 2991.852 kb on - strand, within CA264_12830 at 2991.856 kb on + strand, within CA264_12830 at 2991.857 kb on - strand, within CA264_12830 at 2991.864 kb on - strand, within CA264_12830 at 2991.864 kb on - strand, within CA264_12830 at 2991.880 kb on - strand, within CA264_12830 at 2991.931 kb on + strand, within CA264_12830 at 2991.944 kb on - strand, within CA264_12830 at 2991.945 kb on + strand, within CA264_12830 at 2991.945 kb on + strand, within CA264_12830 at 2991.945 kb on + strand, within CA264_12830 at 2991.945 kb on + strand, within CA264_12830 at 2991.946 kb on - strand, within CA264_12830 at 2991.946 kb on - strand, within CA264_12830 at 2992.007 kb on - strand, within CA264_12830 at 2992.152 kb on - strand, within CA264_12830 at 2992.256 kb on - strand, within CA264_12830 at 2992.269 kb on + strand, within CA264_12830 at 2992.270 kb on - strand, within CA264_12830 at 2992.344 kb on + strand, within CA264_12830 at 2992.361 kb on - strand, within CA264_12830 at 2992.433 kb on - strand, within CA264_12830
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 2,988,825 - CA264_12820 0.20 +1.0 2,988,842 - CA264_12820 0.22 -0.9 2,988,849 + CA264_12820 0.22 +0.1 2,988,850 - CA264_12820 0.22 -0.1 2,988,850 - CA264_12820 0.22 -0.3 2,989,068 - CA264_12820 0.41 -0.1 2,989,095 + CA264_12820 0.44 +0.2 2,989,123 + CA264_12820 0.46 -0.4 2,989,124 - CA264_12820 0.46 -0.2 2,989,127 + CA264_12820 0.46 +0.6 2,989,127 + CA264_12820 0.46 +0.2 2,989,132 + CA264_12820 0.47 -1.0 2,989,132 + CA264_12820 0.47 +0.1 2,989,132 + CA264_12820 0.47 -0.4 2,989,133 - CA264_12820 0.47 -0.5 2,989,133 - CA264_12820 0.47 -0.3 2,989,185 - CA264_12820 0.51 -0.5 2,989,195 + CA264_12820 0.52 +1.7 2,989,195 + CA264_12820 0.52 +0.0 2,989,195 + CA264_12820 0.52 -1.5 2,989,196 - CA264_12820 0.52 -0.5 2,989,235 - CA264_12820 0.56 -0.4 2,989,290 - CA264_12820 0.61 -0.0 2,989,304 + CA264_12820 0.62 -0.8 2,989,322 + CA264_12820 0.63 -0.0 2,989,375 + CA264_12820 0.68 -0.2 2,989,410 + CA264_12820 0.71 +0.0 2,989,410 + CA264_12820 0.71 -0.1 2,989,411 - CA264_12820 0.71 -0.6 2,989,504 + CA264_12820 0.79 -1.2 2,989,504 + CA264_12820 0.79 -0.3 2,989,562 - CA264_12820 0.84 -0.8 2,989,696 + -0.4 2,989,735 + -0.9 2,989,748 + -0.6 2,989,749 - -0.6 2,989,749 - -0.3 2,989,783 + +1.0 2,989,817 + +0.2 2,989,818 - -1.2 2,989,821 - +0.7 2,989,833 + +0.2 2,989,865 + -0.6 2,989,940 - -0.2 2,989,996 + CA264_12825 0.11 -0.5 2,990,017 + CA264_12825 0.12 -0.7 2,990,017 + CA264_12825 0.12 -1.1 2,990,018 - CA264_12825 0.12 +0.1 2,990,018 - CA264_12825 0.12 -1.1 2,990,018 - CA264_12825 0.12 -0.8 2,990,018 - CA264_12825 0.12 +0.6 2,990,018 - CA264_12825 0.12 +0.0 2,990,019 + CA264_12825 0.13 -0.4 2,990,069 + CA264_12825 0.15 -0.6 2,990,069 + CA264_12825 0.15 +0.6 2,990,074 - CA264_12825 0.16 +0.0 2,990,074 - CA264_12825 0.16 -1.5 2,990,121 + CA264_12825 0.19 -0.1 2,990,135 + CA264_12825 0.19 +1.8 2,990,225 + CA264_12825 0.25 -1.3 2,990,327 + CA264_12825 0.31 -1.0 2,990,360 + CA264_12825 0.33 -0.2 2,990,360 + CA264_12825 0.33 +0.2 2,990,361 - CA264_12825 0.33 -0.1 2,990,536 - CA264_12825 0.43 -0.6 2,990,610 + CA264_12825 0.48 -1.8 2,990,636 + CA264_12825 0.49 +0.7 2,990,637 - CA264_12825 0.49 +1.2 2,990,637 - CA264_12825 0.49 -0.1 2,990,661 - CA264_12825 0.51 -0.2 2,990,719 + CA264_12825 0.54 -0.8 2,990,719 + CA264_12825 0.54 -0.8 2,990,720 - CA264_12825 0.54 -1.4 2,990,720 - CA264_12825 0.54 -0.4 2,990,723 - CA264_12825 0.55 -0.0 2,990,816 - CA264_12825 0.60 -0.8 2,990,816 - CA264_12825 0.60 -0.5 2,990,851 + CA264_12825 0.62 -0.2 2,990,851 + CA264_12825 0.62 -0.7 2,990,852 - CA264_12825 0.62 -0.6 2,990,852 - CA264_12825 0.62 -0.0 2,990,852 - CA264_12825 0.62 -1.0 2,990,946 + CA264_12825 0.68 -0.6 2,990,980 + CA264_12825 0.70 -0.2 2,990,981 - CA264_12825 0.70 -0.5 2,990,981 - CA264_12825 0.70 -0.4 2,990,981 - CA264_12825 0.70 -0.8 2,990,981 - CA264_12825 0.70 +0.4 2,990,983 - CA264_12825 0.70 -1.3 2,990,984 + CA264_12825 0.70 -0.1 2,991,026 + CA264_12825 0.73 -0.8 2,991,026 + CA264_12825 0.73 -0.0 2,991,026 + CA264_12825 0.73 +0.4 2,991,027 - CA264_12825 0.73 +0.0 2,991,478 + +1.0 2,991,485 - -1.2 2,991,499 + +0.1 2,991,505 + +0.0 2,991,506 - +0.6 2,991,510 + +0.1 2,991,542 + -0.4 2,991,583 + +0.1 2,991,583 + -0.6 2,991,583 + -0.0 2,991,583 + -0.5 2,991,583 + -1.4 2,991,584 - -1.9 2,991,590 + -0.3 2,991,590 + -0.2 2,991,590 + +0.1 2,991,652 - -2.3 2,991,664 + +0.8 2,991,665 - -0.3 2,991,738 + -0.6 2,991,762 - +0.2 2,991,762 - +0.0 2,991,778 + +1.2 2,991,820 + CA264_12830 0.11 +0.3 2,991,821 - CA264_12830 0.11 +0.8 2,991,822 + CA264_12830 0.11 +2.0 2,991,850 - CA264_12830 0.12 +0.5 2,991,852 - CA264_12830 0.13 +0.6 2,991,852 - CA264_12830 0.13 +0.1 2,991,856 + CA264_12830 0.13 +0.1 2,991,857 - CA264_12830 0.13 +0.5 2,991,864 - CA264_12830 0.13 +0.1 2,991,864 - CA264_12830 0.13 -0.9 2,991,880 - CA264_12830 0.14 +0.8 2,991,931 + CA264_12830 0.17 -0.7 2,991,944 - CA264_12830 0.18 +0.5 2,991,945 + CA264_12830 0.18 -0.6 2,991,945 + CA264_12830 0.18 -0.3 2,991,945 + CA264_12830 0.18 +0.0 2,991,945 + CA264_12830 0.18 -0.5 2,991,946 - CA264_12830 0.18 -0.5 2,991,946 - CA264_12830 0.18 -1.7 2,992,007 - CA264_12830 0.22 +0.3 2,992,152 - CA264_12830 0.31 -0.3 2,992,256 - CA264_12830 0.37 +0.7 2,992,269 + CA264_12830 0.38 +1.0 2,992,270 - CA264_12830 0.38 -1.1 2,992,344 + CA264_12830 0.42 +0.1 2,992,361 - CA264_12830 0.43 -0.2 2,992,433 - CA264_12830 0.47 -0.5
Or see this region's nucleotide sequence