Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12775 and CA264_12780 overlap by 1 nucleotides CA264_12780 and CA264_12785 are separated by 2 nucleotides CA264_12785 and CA264_12790 are separated by 202 nucleotides CA264_12790 and CA264_12795 are separated by 30 nucleotides
CA264_12775: CA264_12775 - TIGR02453 family protein, at 2,980,130 to 2,980,792
_12775
CA264_12780: CA264_12780 - DUF3221 domain-containing protein, at 2,980,792 to 2,981,169
_12780
CA264_12785: CA264_12785 - Rieske (2Fe-2S) protein, at 2,981,172 to 2,981,525
_12785
CA264_12790: CA264_12790 - hypothetical protein, at 2,981,728 to 2,982,147
_12790
CA264_12795: CA264_12795 - hypothetical protein, at 2,982,178 to 2,982,375
_12795
Position (kb)
2981
2982 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2980.270 kb on - strand, within CA264_12775 at 2980.270 kb on - strand, within CA264_12775 at 2980.387 kb on + strand, within CA264_12775 at 2980.424 kb on + strand, within CA264_12775 at 2980.425 kb on - strand, within CA264_12775 at 2980.425 kb on - strand, within CA264_12775 at 2980.521 kb on - strand, within CA264_12775 at 2980.545 kb on + strand, within CA264_12775 at 2980.564 kb on + strand, within CA264_12775 at 2980.679 kb on + strand, within CA264_12775 at 2980.680 kb on - strand, within CA264_12775 at 2980.788 kb on + strand at 2980.788 kb on + strand at 2980.789 kb on - strand at 2980.789 kb on - strand at 2980.790 kb on + strand at 2980.791 kb on - strand at 2980.791 kb on - strand at 2980.898 kb on - strand, within CA264_12780 at 2981.009 kb on + strand, within CA264_12780 at 2981.009 kb on + strand, within CA264_12780 at 2981.010 kb on - strand, within CA264_12780 at 2981.010 kb on - strand, within CA264_12780 at 2981.010 kb on - strand, within CA264_12780 at 2981.033 kb on + strand, within CA264_12780 at 2981.033 kb on + strand, within CA264_12780 at 2981.034 kb on - strand, within CA264_12780 at 2981.064 kb on - strand, within CA264_12780 at 2981.090 kb on + strand, within CA264_12780 at 2981.090 kb on + strand, within CA264_12780 at 2981.090 kb on + strand, within CA264_12780 at 2981.160 kb on - strand at 2981.160 kb on - strand at 2981.164 kb on + strand at 2981.167 kb on + strand at 2981.167 kb on + strand at 2981.189 kb on + strand at 2981.193 kb on + strand at 2981.193 kb on + strand at 2981.194 kb on - strand at 2981.194 kb on - strand at 2981.194 kb on - strand at 2981.195 kb on + strand at 2981.195 kb on + strand at 2981.258 kb on - strand, within CA264_12785 at 2981.258 kb on - strand, within CA264_12785 at 2981.301 kb on - strand, within CA264_12785 at 2981.470 kb on - strand, within CA264_12785 at 2981.535 kb on - strand at 2981.586 kb on + strand at 2981.632 kb on + strand at 2981.633 kb on - strand at 2981.636 kb on + strand at 2981.637 kb on - strand at 2981.668 kb on + strand at 2981.668 kb on + strand at 2981.714 kb on + strand at 2981.770 kb on + strand, within CA264_12790 at 2981.771 kb on - strand, within CA264_12790 at 2981.813 kb on + strand, within CA264_12790 at 2981.814 kb on - strand, within CA264_12790 at 2981.814 kb on - strand, within CA264_12790 at 2981.832 kb on - strand, within CA264_12790 at 2981.986 kb on + strand, within CA264_12790 at 2981.987 kb on - strand, within CA264_12790 at 2981.987 kb on - strand, within CA264_12790 at 2982.146 kb on - strand at 2982.182 kb on - strand at 2982.235 kb on - strand, within CA264_12795 at 2982.235 kb on - strand, within CA264_12795 at 2982.278 kb on - strand, within CA264_12795 at 2982.286 kb on - strand, within CA264_12795 at 2982.286 kb on - strand, within CA264_12795 at 2982.312 kb on - strand, within CA264_12795 at 2982.346 kb on - strand, within CA264_12795 at 2982.382 kb on - strand at 2982.422 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 2,980,270 - CA264_12775 0.21 -0.6 2,980,270 - CA264_12775 0.21 -0.4 2,980,387 + CA264_12775 0.39 -0.6 2,980,424 + CA264_12775 0.44 -0.3 2,980,425 - CA264_12775 0.44 -0.9 2,980,425 - CA264_12775 0.44 +0.1 2,980,521 - CA264_12775 0.59 -0.3 2,980,545 + CA264_12775 0.63 +0.2 2,980,564 + CA264_12775 0.65 +0.4 2,980,679 + CA264_12775 0.83 -0.1 2,980,680 - CA264_12775 0.83 -0.4 2,980,788 + +0.5 2,980,788 + +0.0 2,980,789 - -0.0 2,980,789 - +0.6 2,980,790 + +0.1 2,980,791 - +2.2 2,980,791 - -0.5 2,980,898 - CA264_12780 0.28 -1.1 2,981,009 + CA264_12780 0.57 +0.0 2,981,009 + CA264_12780 0.57 -0.5 2,981,010 - CA264_12780 0.58 -0.9 2,981,010 - CA264_12780 0.58 -0.2 2,981,010 - CA264_12780 0.58 -0.6 2,981,033 + CA264_12780 0.64 -0.2 2,981,033 + CA264_12780 0.64 -1.5 2,981,034 - CA264_12780 0.64 -0.6 2,981,064 - CA264_12780 0.72 -0.4 2,981,090 + CA264_12780 0.79 -1.1 2,981,090 + CA264_12780 0.79 -0.3 2,981,090 + CA264_12780 0.79 +1.2 2,981,160 - -0.6 2,981,160 - -0.9 2,981,164 + +0.4 2,981,167 + +0.1 2,981,167 + -0.9 2,981,189 + -1.3 2,981,193 + +0.3 2,981,193 + -0.2 2,981,194 - -1.5 2,981,194 - -0.7 2,981,194 - +1.0 2,981,195 + -0.2 2,981,195 + -1.5 2,981,258 - CA264_12785 0.24 -1.5 2,981,258 - CA264_12785 0.24 -0.5 2,981,301 - CA264_12785 0.36 -0.9 2,981,470 - CA264_12785 0.84 -2.4 2,981,535 - +0.6 2,981,586 + -0.7 2,981,632 + -0.5 2,981,633 - -0.2 2,981,636 + +0.6 2,981,637 - -0.4 2,981,668 + -1.7 2,981,668 + -0.7 2,981,714 + -0.5 2,981,770 + CA264_12790 0.10 -0.8 2,981,771 - CA264_12790 0.10 -0.2 2,981,813 + CA264_12790 0.20 -0.0 2,981,814 - CA264_12790 0.20 -0.1 2,981,814 - CA264_12790 0.20 +0.2 2,981,832 - CA264_12790 0.25 +1.0 2,981,986 + CA264_12790 0.61 -0.9 2,981,987 - CA264_12790 0.62 -0.6 2,981,987 - CA264_12790 0.62 -0.7 2,982,146 - -0.1 2,982,182 - -1.4 2,982,235 - CA264_12795 0.29 +0.2 2,982,235 - CA264_12795 0.29 -1.7 2,982,278 - CA264_12795 0.51 +0.2 2,982,286 - CA264_12795 0.55 -1.1 2,982,286 - CA264_12795 0.55 -1.1 2,982,312 - CA264_12795 0.68 -0.1 2,982,346 - CA264_12795 0.85 -1.7 2,982,382 - -0.1 2,982,422 + -1.0
Or see this region's nucleotide sequence