Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12155 and CA264_12160 are separated by 315 nucleotides CA264_12160 and CA264_12165 overlap by 17 nucleotides CA264_12165 and CA264_12170 are separated by 97 nucleotides
CA264_12155: CA264_12155 - histidine phosphatase family protein, at 2,835,141 to 2,835,725
_12155
CA264_12160: CA264_12160 - transcriptional regulator, at 2,836,041 to 2,836,439
_12160
CA264_12165: CA264_12165 - hypothetical protein, at 2,836,423 to 2,837,733
_12165
CA264_12170: CA264_12170 - hypothetical protein, at 2,837,831 to 2,838,925
_12170
CA264_12175: CA264_12175 - hypothetical protein, at 2,838,565 to 2,839,107
_12175
Position (kb)
2836
2837
2838 Strain fitness (log2 ratio)
-1
0
1
2 at 2836.020 kb on + strand at 2836.149 kb on + strand, within CA264_12160 at 2836.230 kb on + strand, within CA264_12160 at 2836.433 kb on + strand at 2836.434 kb on - strand at 2836.441 kb on + strand at 2836.442 kb on - strand at 2836.442 kb on - strand at 2836.534 kb on + strand at 2836.592 kb on + strand, within CA264_12165 at 2836.837 kb on + strand, within CA264_12165 at 2836.837 kb on + strand, within CA264_12165 at 2836.881 kb on + strand, within CA264_12165 at 2837.115 kb on + strand, within CA264_12165 at 2837.116 kb on - strand, within CA264_12165 at 2837.145 kb on + strand, within CA264_12165 at 2837.145 kb on + strand, within CA264_12165 at 2837.146 kb on - strand, within CA264_12165 at 2837.146 kb on - strand, within CA264_12165 at 2837.175 kb on + strand, within CA264_12165 at 2837.194 kb on - strand, within CA264_12165 at 2837.240 kb on + strand, within CA264_12165 at 2837.339 kb on + strand, within CA264_12165 at 2837.423 kb on - strand, within CA264_12165 at 2837.423 kb on - strand, within CA264_12165 at 2837.424 kb on + strand, within CA264_12165 at 2837.425 kb on - strand, within CA264_12165 at 2837.428 kb on + strand, within CA264_12165 at 2837.529 kb on - strand, within CA264_12165 at 2837.614 kb on - strand at 2837.616 kb on - strand at 2837.628 kb on + strand at 2837.701 kb on + strand at 2837.732 kb on - strand at 2837.734 kb on + strand at 2837.783 kb on + strand at 2837.794 kb on + strand at 2837.794 kb on + strand at 2837.936 kb on + strand at 2837.936 kb on + strand at 2837.942 kb on + strand, within CA264_12170 at 2837.943 kb on - strand, within CA264_12170 at 2837.943 kb on - strand, within CA264_12170 at 2837.943 kb on - strand, within CA264_12170 at 2837.943 kb on - strand, within CA264_12170 at 2838.414 kb on + strand, within CA264_12170 at 2838.414 kb on + strand, within CA264_12170 at 2838.436 kb on - strand, within CA264_12170 at 2838.471 kb on - strand, within CA264_12170 at 2838.472 kb on + strand, within CA264_12170 at 2838.473 kb on - strand, within CA264_12170
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 2,836,020 + +0.2 2,836,149 + CA264_12160 0.27 +0.5 2,836,230 + CA264_12160 0.47 -0.8 2,836,433 + +0.4 2,836,434 - +0.6 2,836,441 + +0.0 2,836,442 - -1.0 2,836,442 - +0.0 2,836,534 + -0.4 2,836,592 + CA264_12165 0.13 +0.5 2,836,837 + CA264_12165 0.32 -0.2 2,836,837 + CA264_12165 0.32 -0.8 2,836,881 + CA264_12165 0.35 +0.2 2,837,115 + CA264_12165 0.53 -1.6 2,837,116 - CA264_12165 0.53 -0.6 2,837,145 + CA264_12165 0.55 +1.3 2,837,145 + CA264_12165 0.55 -0.3 2,837,146 - CA264_12165 0.55 +0.2 2,837,146 - CA264_12165 0.55 -0.4 2,837,175 + CA264_12165 0.57 +1.7 2,837,194 - CA264_12165 0.59 +0.2 2,837,240 + CA264_12165 0.62 +0.2 2,837,339 + CA264_12165 0.70 -0.3 2,837,423 - CA264_12165 0.76 -0.2 2,837,423 - CA264_12165 0.76 -0.6 2,837,424 + CA264_12165 0.76 -1.2 2,837,425 - CA264_12165 0.76 -0.4 2,837,428 + CA264_12165 0.77 -0.4 2,837,529 - CA264_12165 0.84 +0.1 2,837,614 - -0.4 2,837,616 - -0.3 2,837,628 + +0.6 2,837,701 + -0.4 2,837,732 - -0.7 2,837,734 + -0.3 2,837,783 + -1.5 2,837,794 + +2.2 2,837,794 + -0.2 2,837,936 + -0.1 2,837,936 + +0.1 2,837,942 + CA264_12170 0.10 +0.9 2,837,943 - CA264_12170 0.10 -0.2 2,837,943 - CA264_12170 0.10 -0.3 2,837,943 - CA264_12170 0.10 -1.0 2,837,943 - CA264_12170 0.10 -0.1 2,838,414 + CA264_12170 0.53 -0.5 2,838,414 + CA264_12170 0.53 -0.4 2,838,436 - CA264_12170 0.55 -0.2 2,838,471 - CA264_12170 0.58 -0.3 2,838,472 + CA264_12170 0.59 -0.2 2,838,473 - CA264_12170 0.59 -1.0
Or see this region's nucleotide sequence