Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12030 and CA264_12035 are separated by 317 nucleotides CA264_12035 and CA264_12040 are separated by 48 nucleotides CA264_12040 and CA264_12045 are separated by 21 nucleotides
CA264_12030: CA264_12030 - aspartate aminotransferase family protein, at 2,798,956 to 2,800,152
_12030
CA264_12035: CA264_12035 - SLC13 family permease, at 2,800,470 to 2,802,227
_12035
CA264_12040: CA264_12040 - hypothetical protein, at 2,802,276 to 2,802,902
_12040
CA264_12045: CA264_12045 - hypothetical protein, at 2,802,924 to 2,803,259
_12045
Position (kb)
2800
2801
2802
2803 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2799.501 kb on + strand, within CA264_12030 at 2799.681 kb on - strand, within CA264_12030 at 2799.729 kb on + strand, within CA264_12030 at 2799.771 kb on + strand, within CA264_12030 at 2799.771 kb on + strand, within CA264_12030 at 2799.860 kb on + strand, within CA264_12030 at 2799.861 kb on - strand, within CA264_12030 at 2800.021 kb on - strand, within CA264_12030 at 2800.197 kb on + strand at 2800.238 kb on - strand at 2800.244 kb on - strand at 2800.340 kb on + strand at 2800.345 kb on + strand at 2800.345 kb on + strand at 2800.346 kb on - strand at 2800.346 kb on - strand at 2800.376 kb on + strand at 2800.377 kb on - strand at 2800.377 kb on - strand at 2800.377 kb on - strand at 2800.418 kb on - strand at 2800.432 kb on + strand at 2800.433 kb on - strand at 2800.433 kb on - strand at 2800.449 kb on + strand at 2800.450 kb on - strand at 2800.451 kb on + strand at 2800.451 kb on + strand at 2800.452 kb on - strand at 2800.452 kb on - strand at 2800.517 kb on - strand at 2800.559 kb on + strand at 2800.589 kb on + strand at 2800.640 kb on + strand at 2800.641 kb on - strand at 2800.642 kb on + strand at 2800.643 kb on - strand at 2800.657 kb on + strand, within CA264_12035 at 2800.661 kb on + strand, within CA264_12035 at 2800.662 kb on - strand, within CA264_12035 at 2800.765 kb on + strand, within CA264_12035 at 2801.005 kb on + strand, within CA264_12035 at 2801.037 kb on + strand, within CA264_12035 at 2801.038 kb on - strand, within CA264_12035 at 2801.038 kb on - strand, within CA264_12035 at 2801.311 kb on + strand, within CA264_12035 at 2801.336 kb on + strand, within CA264_12035 at 2801.480 kb on + strand, within CA264_12035 at 2801.481 kb on - strand, within CA264_12035 at 2801.673 kb on - strand, within CA264_12035 at 2801.677 kb on + strand, within CA264_12035 at 2801.781 kb on + strand, within CA264_12035 at 2801.782 kb on - strand, within CA264_12035 at 2801.990 kb on - strand, within CA264_12035 at 2802.060 kb on - strand at 2802.132 kb on + strand at 2802.153 kb on - strand at 2802.284 kb on + strand at 2802.284 kb on + strand at 2802.285 kb on - strand at 2802.286 kb on + strand at 2802.286 kb on + strand at 2802.286 kb on + strand at 2802.287 kb on - strand at 2802.287 kb on - strand at 2802.287 kb on - strand at 2802.421 kb on + strand, within CA264_12040 at 2802.443 kb on - strand, within CA264_12040 at 2802.454 kb on + strand, within CA264_12040 at 2802.481 kb on + strand, within CA264_12040 at 2802.622 kb on + strand, within CA264_12040 at 2802.678 kb on + strand, within CA264_12040 at 2802.678 kb on + strand, within CA264_12040 at 2802.679 kb on - strand, within CA264_12040 at 2802.689 kb on - strand, within CA264_12040 at 2802.713 kb on + strand, within CA264_12040 at 2802.731 kb on + strand, within CA264_12040 at 2802.731 kb on + strand, within CA264_12040 at 2802.741 kb on + strand, within CA264_12040 at 2802.744 kb on + strand, within CA264_12040 at 2802.745 kb on - strand, within CA264_12040 at 2802.753 kb on - strand, within CA264_12040 at 2802.856 kb on - strand at 2802.886 kb on - strand at 2802.978 kb on + strand, within CA264_12045 at 2802.978 kb on + strand, within CA264_12045 at 2802.978 kb on + strand, within CA264_12045 at 2802.979 kb on - strand, within CA264_12045 at 2802.984 kb on - strand, within CA264_12045 at 2803.035 kb on - strand, within CA264_12045 at 2803.057 kb on + strand, within CA264_12045 at 2803.057 kb on + strand, within CA264_12045 at 2803.057 kb on + strand, within CA264_12045 at 2803.057 kb on + strand, within CA264_12045 at 2803.057 kb on + strand, within CA264_12045 at 2803.058 kb on - strand, within CA264_12045 at 2803.074 kb on + strand, within CA264_12045 at 2803.074 kb on + strand, within CA264_12045 at 2803.074 kb on + strand, within CA264_12045 at 2803.086 kb on - strand, within CA264_12045 at 2803.086 kb on - strand, within CA264_12045 at 2803.121 kb on + strand, within CA264_12045 at 2803.145 kb on - strand, within CA264_12045 at 2803.145 kb on - strand, within CA264_12045 at 2803.217 kb on - strand, within CA264_12045
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 2,799,501 + CA264_12030 0.46 -0.7 2,799,681 - CA264_12030 0.61 +1.6 2,799,729 + CA264_12030 0.65 -0.4 2,799,771 + CA264_12030 0.68 -3.1 2,799,771 + CA264_12030 0.68 +0.6 2,799,860 + CA264_12030 0.76 -2.2 2,799,861 - CA264_12030 0.76 -1.2 2,800,021 - CA264_12030 0.89 -0.0 2,800,197 + -1.4 2,800,238 - +0.2 2,800,244 - +0.5 2,800,340 + -1.6 2,800,345 + +0.6 2,800,345 + +0.2 2,800,346 - -2.0 2,800,346 - -0.2 2,800,376 + -0.3 2,800,377 - +0.0 2,800,377 - -1.9 2,800,377 - -1.4 2,800,418 - -0.3 2,800,432 + -0.1 2,800,433 - -1.3 2,800,433 - -0.4 2,800,449 + -1.2 2,800,450 - -0.4 2,800,451 + +0.2 2,800,451 + +0.3 2,800,452 - +0.6 2,800,452 - +0.1 2,800,517 - +0.0 2,800,559 + -0.4 2,800,589 + +0.2 2,800,640 + -0.1 2,800,641 - +0.1 2,800,642 + +0.4 2,800,643 - +0.1 2,800,657 + CA264_12035 0.11 +1.5 2,800,661 + CA264_12035 0.11 -0.5 2,800,662 - CA264_12035 0.11 -0.2 2,800,765 + CA264_12035 0.17 -0.5 2,801,005 + CA264_12035 0.30 -2.4 2,801,037 + CA264_12035 0.32 +0.8 2,801,038 - CA264_12035 0.32 +0.4 2,801,038 - CA264_12035 0.32 +1.1 2,801,311 + CA264_12035 0.48 -1.8 2,801,336 + CA264_12035 0.49 -0.0 2,801,480 + CA264_12035 0.57 -1.4 2,801,481 - CA264_12035 0.58 -0.2 2,801,673 - CA264_12035 0.68 -0.3 2,801,677 + CA264_12035 0.69 -0.6 2,801,781 + CA264_12035 0.75 -1.8 2,801,782 - CA264_12035 0.75 +1.1 2,801,990 - CA264_12035 0.86 -1.2 2,802,060 - -0.4 2,802,132 + +0.3 2,802,153 - -0.7 2,802,284 + -0.0 2,802,284 + +0.4 2,802,285 - +0.3 2,802,286 + -0.1 2,802,286 + -0.4 2,802,286 + +0.6 2,802,287 - -2.1 2,802,287 - -0.2 2,802,287 - +0.3 2,802,421 + CA264_12040 0.23 -0.5 2,802,443 - CA264_12040 0.27 -0.1 2,802,454 + CA264_12040 0.28 -0.1 2,802,481 + CA264_12040 0.33 -0.4 2,802,622 + CA264_12040 0.55 -0.5 2,802,678 + CA264_12040 0.64 +0.2 2,802,678 + CA264_12040 0.64 -0.1 2,802,679 - CA264_12040 0.64 -0.8 2,802,689 - CA264_12040 0.66 +1.3 2,802,713 + CA264_12040 0.70 +0.3 2,802,731 + CA264_12040 0.73 +0.4 2,802,731 + CA264_12040 0.73 +0.7 2,802,741 + CA264_12040 0.74 -0.4 2,802,744 + CA264_12040 0.75 +0.2 2,802,745 - CA264_12040 0.75 +0.6 2,802,753 - CA264_12040 0.76 -0.2 2,802,856 - +0.2 2,802,886 - -2.1 2,802,978 + CA264_12045 0.16 -0.9 2,802,978 + CA264_12045 0.16 -0.2 2,802,978 + CA264_12045 0.16 +0.1 2,802,979 - CA264_12045 0.16 +0.6 2,802,984 - CA264_12045 0.18 +0.4 2,803,035 - CA264_12045 0.33 -0.1 2,803,057 + CA264_12045 0.40 +0.2 2,803,057 + CA264_12045 0.40 -0.4 2,803,057 + CA264_12045 0.40 -1.7 2,803,057 + CA264_12045 0.40 -2.5 2,803,057 + CA264_12045 0.40 -0.1 2,803,058 - CA264_12045 0.40 -0.1 2,803,074 + CA264_12045 0.45 +0.5 2,803,074 + CA264_12045 0.45 -0.2 2,803,074 + CA264_12045 0.45 +0.5 2,803,086 - CA264_12045 0.48 -1.1 2,803,086 - CA264_12045 0.48 +1.0 2,803,121 + CA264_12045 0.59 -1.0 2,803,145 - CA264_12045 0.66 -0.7 2,803,145 - CA264_12045 0.66 +0.0 2,803,217 - CA264_12045 0.87 -0.3
Or see this region's nucleotide sequence