Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11040 and CA264_11045 are separated by 168 nucleotides CA264_11045 and CA264_11050 are separated by 96 nucleotides CA264_11050 and CA264_11055 are separated by 116 nucleotides
CA264_11040: CA264_11040 - tRNA nucleotidyltransferase, at 2,549,506 to 2,550,939
_11040
CA264_11045: CA264_11045 - threonylcarbamoyl-AMP synthase, at 2,551,108 to 2,551,680
_11045
CA264_11050: CA264_11050 - methylmalonyl-CoA epimerase, at 2,551,777 to 2,552,178
_11050
CA264_11055: CA264_11055 - cysteine desulfurase, at 2,552,295 to 2,553,509
_11055
Position (kb)
2551
2552
2553 Strain fitness (log2 ratio)
-2
-1
0
1 at 2551.040 kb on + strand at 2551.040 kb on + strand at 2551.078 kb on + strand at 2551.079 kb on - strand at 2551.079 kb on - strand at 2551.109 kb on + strand at 2551.110 kb on - strand at 2551.669 kb on + strand at 2551.783 kb on + strand at 2551.924 kb on + strand, within CA264_11050 at 2551.924 kb on + strand, within CA264_11050 at 2551.924 kb on + strand, within CA264_11050 at 2551.947 kb on + strand, within CA264_11050 at 2551.947 kb on + strand, within CA264_11050 at 2551.948 kb on - strand, within CA264_11050 at 2552.038 kb on + strand, within CA264_11050 at 2552.090 kb on + strand, within CA264_11050 at 2552.090 kb on + strand, within CA264_11050 at 2552.161 kb on - strand at 2552.167 kb on + strand at 2552.168 kb on - strand at 2552.190 kb on - strand at 2552.202 kb on + strand at 2552.239 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 2,551,040 + -0.0 2,551,040 + -0.7 2,551,078 + -0.7 2,551,079 - -0.1 2,551,079 - +0.3 2,551,109 + +0.1 2,551,110 - -0.4 2,551,669 + +0.6 2,551,783 + -2.2 2,551,924 + CA264_11050 0.37 -0.6 2,551,924 + CA264_11050 0.37 -1.2 2,551,924 + CA264_11050 0.37 -0.6 2,551,947 + CA264_11050 0.42 -1.4 2,551,947 + CA264_11050 0.42 -2.1 2,551,948 - CA264_11050 0.43 -0.7 2,552,038 + CA264_11050 0.65 -1.0 2,552,090 + CA264_11050 0.78 -1.3 2,552,090 + CA264_11050 0.78 -1.3 2,552,161 - +0.7 2,552,167 + -1.3 2,552,168 - -1.7 2,552,190 - -0.6 2,552,202 + +1.1 2,552,239 + +1.0
Or see this region's nucleotide sequence