Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10970 and CA264_10975 are separated by 266 nucleotides CA264_10975 and CA264_10980 are separated by 54 nucleotides CA264_10980 and CA264_10985 are separated by 79 nucleotides
CA264_10970: CA264_10970 - ferredoxin, at 2,530,188 to 2,531,276
_10970
CA264_10975: CA264_10975 - Pathogenesis-related transcriptional factor and ERF protein, at 2,531,543 to 2,532,112
_10975
CA264_10980: CA264_10980 - peptidase M23, at 2,532,167 to 2,532,883
_10980
CA264_10985: CA264_10985 - mechanosensitive ion channel protein MscS, at 2,532,963 to 2,533,805
_10985
Position (kb)
2531
2532
2533 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2530.636 kb on + strand, within CA264_10970 at 2530.636 kb on + strand, within CA264_10970 at 2530.637 kb on - strand, within CA264_10970 at 2530.639 kb on + strand, within CA264_10970 at 2530.639 kb on + strand, within CA264_10970 at 2530.639 kb on + strand, within CA264_10970 at 2530.640 kb on - strand, within CA264_10970 at 2530.695 kb on - strand, within CA264_10970 at 2530.695 kb on - strand, within CA264_10970 at 2530.744 kb on + strand, within CA264_10970 at 2530.745 kb on - strand, within CA264_10970 at 2530.745 kb on - strand, within CA264_10970 at 2530.751 kb on - strand, within CA264_10970 at 2530.774 kb on + strand, within CA264_10970 at 2530.811 kb on + strand, within CA264_10970 at 2530.811 kb on + strand, within CA264_10970 at 2530.837 kb on + strand, within CA264_10970 at 2531.008 kb on - strand, within CA264_10970 at 2531.029 kb on + strand, within CA264_10970 at 2531.029 kb on + strand, within CA264_10970 at 2531.030 kb on - strand, within CA264_10970 at 2531.061 kb on + strand, within CA264_10970 at 2531.062 kb on - strand, within CA264_10970 at 2531.149 kb on - strand, within CA264_10970 at 2531.244 kb on + strand at 2531.258 kb on + strand at 2531.259 kb on - strand at 2531.270 kb on + strand at 2531.271 kb on - strand at 2531.301 kb on - strand at 2531.301 kb on - strand at 2531.301 kb on - strand at 2531.311 kb on - strand at 2531.341 kb on - strand at 2531.364 kb on - strand at 2531.469 kb on + strand at 2531.498 kb on + strand at 2531.498 kb on + strand at 2531.509 kb on - strand at 2531.511 kb on + strand at 2531.529 kb on - strand at 2531.599 kb on + strand at 2531.609 kb on + strand, within CA264_10975 at 2531.738 kb on + strand, within CA264_10975 at 2531.802 kb on + strand, within CA264_10975 at 2531.803 kb on - strand, within CA264_10975 at 2531.939 kb on + strand, within CA264_10975 at 2531.957 kb on + strand, within CA264_10975 at 2531.958 kb on - strand, within CA264_10975 at 2531.997 kb on + strand, within CA264_10975 at 2532.018 kb on - strand, within CA264_10975 at 2532.166 kb on + strand at 2532.166 kb on + strand at 2532.167 kb on - strand at 2532.568 kb on + strand, within CA264_10980 at 2532.602 kb on + strand, within CA264_10980 at 2532.603 kb on - strand, within CA264_10980 at 2532.611 kb on + strand, within CA264_10980 at 2532.612 kb on - strand, within CA264_10980 at 2532.742 kb on + strand, within CA264_10980 at 2532.744 kb on + strand, within CA264_10980 at 2532.744 kb on + strand, within CA264_10980 at 2532.809 kb on + strand, within CA264_10980 at 2532.809 kb on + strand, within CA264_10980 at 2532.810 kb on - strand, within CA264_10980 at 2532.881 kb on + strand at 2532.951 kb on + strand at 2532.957 kb on - strand at 2533.015 kb on - strand at 2533.015 kb on - strand at 2533.079 kb on - strand, within CA264_10985 at 2533.079 kb on - strand, within CA264_10985 at 2533.091 kb on - strand, within CA264_10985
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 2,530,636 + CA264_10970 0.41 -0.0 2,530,636 + CA264_10970 0.41 +0.1 2,530,637 - CA264_10970 0.41 -0.0 2,530,639 + CA264_10970 0.41 +0.2 2,530,639 + CA264_10970 0.41 +2.4 2,530,639 + CA264_10970 0.41 -1.3 2,530,640 - CA264_10970 0.42 -0.5 2,530,695 - CA264_10970 0.47 +0.4 2,530,695 - CA264_10970 0.47 -0.5 2,530,744 + CA264_10970 0.51 -0.5 2,530,745 - CA264_10970 0.51 -0.6 2,530,745 - CA264_10970 0.51 -0.4 2,530,751 - CA264_10970 0.52 -0.2 2,530,774 + CA264_10970 0.54 +0.2 2,530,811 + CA264_10970 0.57 -0.0 2,530,811 + CA264_10970 0.57 -0.7 2,530,837 + CA264_10970 0.60 +0.2 2,531,008 - CA264_10970 0.75 +0.3 2,531,029 + CA264_10970 0.77 -0.0 2,531,029 + CA264_10970 0.77 -0.1 2,531,030 - CA264_10970 0.77 -0.8 2,531,061 + CA264_10970 0.80 +0.2 2,531,062 - CA264_10970 0.80 -0.7 2,531,149 - CA264_10970 0.88 -0.3 2,531,244 + +0.1 2,531,258 + +0.2 2,531,259 - -0.9 2,531,270 + -0.1 2,531,271 - -0.0 2,531,301 - -0.5 2,531,301 - -0.2 2,531,301 - -0.2 2,531,311 - +0.1 2,531,341 - -0.8 2,531,364 - -0.2 2,531,469 + -0.0 2,531,498 + +0.6 2,531,498 + +1.7 2,531,509 - -0.5 2,531,511 + +2.9 2,531,529 - -0.2 2,531,599 + +0.1 2,531,609 + CA264_10975 0.12 -0.9 2,531,738 + CA264_10975 0.34 -0.4 2,531,802 + CA264_10975 0.45 -1.3 2,531,803 - CA264_10975 0.46 -1.4 2,531,939 + CA264_10975 0.69 -0.9 2,531,957 + CA264_10975 0.73 -0.4 2,531,958 - CA264_10975 0.73 -1.3 2,531,997 + CA264_10975 0.80 -0.5 2,532,018 - CA264_10975 0.83 -2.0 2,532,166 + -0.7 2,532,166 + -0.2 2,532,167 - -1.9 2,532,568 + CA264_10980 0.56 -1.0 2,532,602 + CA264_10980 0.61 +0.9 2,532,603 - CA264_10980 0.61 +0.3 2,532,611 + CA264_10980 0.62 +1.7 2,532,612 - CA264_10980 0.62 -2.5 2,532,742 + CA264_10980 0.80 -0.8 2,532,744 + CA264_10980 0.80 +0.8 2,532,744 + CA264_10980 0.80 -0.4 2,532,809 + CA264_10980 0.90 -1.8 2,532,809 + CA264_10980 0.90 -0.7 2,532,810 - CA264_10980 0.90 -1.3 2,532,881 + -0.4 2,532,951 + +0.6 2,532,957 - -1.1 2,533,015 - -0.7 2,533,015 - -1.2 2,533,079 - CA264_10985 0.14 -1.1 2,533,079 - CA264_10985 0.14 -0.2 2,533,091 - CA264_10985 0.15 +0.5
Or see this region's nucleotide sequence