Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10880 and CA264_10885 are separated by 173 nucleotides CA264_10885 and CA264_10890 are separated by 70 nucleotides CA264_10890 and CA264_10895 are separated by 5 nucleotides CA264_10895 and CA264_10900 are separated by 121 nucleotides
CA264_10880: CA264_10880 - hypothetical protein, at 2,514,580 to 2,515,128
_10880
CA264_10885: CA264_10885 - fatty acid desaturase, at 2,515,302 to 2,515,991
_10885
CA264_10890: CA264_10890 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 2,516,062 to 2,516,913
_10890
CA264_10895: CA264_10895 - hypothetical protein, at 2,516,919 to 2,517,617
_10895
CA264_10900: CA264_10900 - hypothetical protein, at 2,517,739 to 2,518,272
_10900
Position (kb)
2516
2517 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2515.132 kb on - strand at 2515.147 kb on + strand at 2515.149 kb on + strand at 2515.149 kb on + strand at 2515.150 kb on - strand at 2515.157 kb on - strand at 2515.201 kb on - strand at 2515.209 kb on - strand at 2515.361 kb on - strand at 2515.361 kb on - strand at 2515.388 kb on + strand, within CA264_10885 at 2515.468 kb on + strand, within CA264_10885 at 2515.503 kb on + strand, within CA264_10885 at 2515.503 kb on + strand, within CA264_10885 at 2515.566 kb on - strand, within CA264_10885 at 2515.601 kb on + strand, within CA264_10885 at 2515.602 kb on - strand, within CA264_10885 at 2515.606 kb on + strand, within CA264_10885 at 2515.606 kb on + strand, within CA264_10885 at 2515.607 kb on - strand, within CA264_10885 at 2515.607 kb on - strand, within CA264_10885 at 2515.607 kb on - strand, within CA264_10885 at 2515.628 kb on - strand, within CA264_10885 at 2515.727 kb on + strand, within CA264_10885 at 2515.727 kb on + strand, within CA264_10885 at 2515.727 kb on + strand, within CA264_10885 at 2515.729 kb on + strand, within CA264_10885 at 2515.730 kb on - strand, within CA264_10885 at 2515.738 kb on - strand, within CA264_10885 at 2515.837 kb on + strand, within CA264_10885 at 2515.867 kb on + strand, within CA264_10885 at 2515.868 kb on - strand, within CA264_10885 at 2515.868 kb on - strand, within CA264_10885 at 2515.872 kb on - strand, within CA264_10885 at 2515.872 kb on - strand, within CA264_10885 at 2515.965 kb on + strand at 2516.002 kb on + strand at 2516.020 kb on - strand at 2516.072 kb on + strand at 2516.072 kb on + strand at 2516.073 kb on - strand at 2516.073 kb on - strand at 2516.073 kb on - strand at 2516.220 kb on + strand, within CA264_10890 at 2516.221 kb on - strand, within CA264_10890 at 2516.231 kb on + strand, within CA264_10890 at 2516.231 kb on + strand, within CA264_10890 at 2516.232 kb on - strand, within CA264_10890 at 2516.343 kb on + strand, within CA264_10890 at 2516.396 kb on + strand, within CA264_10890 at 2516.396 kb on + strand, within CA264_10890 at 2516.397 kb on - strand, within CA264_10890 at 2516.436 kb on + strand, within CA264_10890 at 2516.439 kb on + strand, within CA264_10890 at 2516.525 kb on - strand, within CA264_10890 at 2516.525 kb on - strand, within CA264_10890 at 2516.554 kb on - strand, within CA264_10890 at 2516.709 kb on + strand, within CA264_10890 at 2516.807 kb on + strand, within CA264_10890 at 2516.855 kb on + strand at 2516.914 kb on - strand at 2516.916 kb on - strand at 2516.920 kb on + strand at 2516.920 kb on + strand at 2516.922 kb on + strand at 2516.939 kb on - strand at 2516.939 kb on - strand at 2517.010 kb on + strand, within CA264_10895 at 2517.011 kb on - strand, within CA264_10895 at 2517.018 kb on - strand, within CA264_10895 at 2517.018 kb on - strand, within CA264_10895 at 2517.137 kb on - strand, within CA264_10895 at 2517.227 kb on + strand, within CA264_10895 at 2517.228 kb on - strand, within CA264_10895 at 2517.229 kb on + strand, within CA264_10895 at 2517.346 kb on + strand, within CA264_10895 at 2517.351 kb on - strand, within CA264_10895 at 2517.416 kb on - strand, within CA264_10895 at 2517.538 kb on + strand, within CA264_10895 at 2517.607 kb on + strand at 2517.607 kb on + strand at 2517.608 kb on - strand at 2517.613 kb on + strand at 2517.613 kb on + strand at 2517.613 kb on + strand at 2517.613 kb on + strand at 2517.614 kb on - strand at 2517.651 kb on + strand at 2517.651 kb on + strand at 2517.651 kb on + strand at 2517.651 kb on + strand at 2517.652 kb on - strand at 2517.652 kb on - strand at 2517.652 kb on - strand at 2517.652 kb on - strand at 2517.652 kb on - strand at 2517.652 kb on - strand at 2517.652 kb on - strand at 2517.656 kb on - strand at 2517.674 kb on - strand at 2517.675 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 2,515,132 - +1.3 2,515,147 + +0.0 2,515,149 + -0.3 2,515,149 + -0.2 2,515,150 - -2.6 2,515,157 - -0.5 2,515,201 - +0.2 2,515,209 - +0.1 2,515,361 - +0.1 2,515,361 - +0.1 2,515,388 + CA264_10885 0.12 -0.1 2,515,468 + CA264_10885 0.24 +0.2 2,515,503 + CA264_10885 0.29 -0.0 2,515,503 + CA264_10885 0.29 +0.7 2,515,566 - CA264_10885 0.38 +0.1 2,515,601 + CA264_10885 0.43 +1.1 2,515,602 - CA264_10885 0.43 +0.7 2,515,606 + CA264_10885 0.44 +0.3 2,515,606 + CA264_10885 0.44 -1.7 2,515,607 - CA264_10885 0.44 -1.9 2,515,607 - CA264_10885 0.44 -0.2 2,515,607 - CA264_10885 0.44 +0.1 2,515,628 - CA264_10885 0.47 -0.0 2,515,727 + CA264_10885 0.62 +0.5 2,515,727 + CA264_10885 0.62 +0.2 2,515,727 + CA264_10885 0.62 -0.2 2,515,729 + CA264_10885 0.62 -0.4 2,515,730 - CA264_10885 0.62 -1.6 2,515,738 - CA264_10885 0.63 +0.8 2,515,837 + CA264_10885 0.78 +0.8 2,515,867 + CA264_10885 0.82 +0.1 2,515,868 - CA264_10885 0.82 -0.0 2,515,868 - CA264_10885 0.82 +0.2 2,515,872 - CA264_10885 0.83 -0.2 2,515,872 - CA264_10885 0.83 -0.5 2,515,965 + +0.1 2,516,002 + -0.7 2,516,020 - +0.1 2,516,072 + +0.3 2,516,072 + +1.0 2,516,073 - -0.4 2,516,073 - -0.8 2,516,073 - +1.2 2,516,220 + CA264_10890 0.19 +0.3 2,516,221 - CA264_10890 0.19 +0.6 2,516,231 + CA264_10890 0.20 +0.4 2,516,231 + CA264_10890 0.20 -0.7 2,516,232 - CA264_10890 0.20 -1.0 2,516,343 + CA264_10890 0.33 +0.1 2,516,396 + CA264_10890 0.39 -0.1 2,516,396 + CA264_10890 0.39 -0.1 2,516,397 - CA264_10890 0.39 +0.7 2,516,436 + CA264_10890 0.44 -0.3 2,516,439 + CA264_10890 0.44 -1.4 2,516,525 - CA264_10890 0.54 -0.6 2,516,525 - CA264_10890 0.54 -0.5 2,516,554 - CA264_10890 0.58 -0.2 2,516,709 + CA264_10890 0.76 -0.4 2,516,807 + CA264_10890 0.87 +0.7 2,516,855 + -1.1 2,516,914 - -0.4 2,516,916 - +0.1 2,516,920 + +0.3 2,516,920 + +0.1 2,516,922 + -0.4 2,516,939 - +0.1 2,516,939 - +0.2 2,517,010 + CA264_10895 0.13 -3.5 2,517,011 - CA264_10895 0.13 -1.2 2,517,018 - CA264_10895 0.14 -1.1 2,517,018 - CA264_10895 0.14 -0.4 2,517,137 - CA264_10895 0.31 -1.1 2,517,227 + CA264_10895 0.44 -0.4 2,517,228 - CA264_10895 0.44 +0.8 2,517,229 + CA264_10895 0.44 -0.9 2,517,346 + CA264_10895 0.61 -1.8 2,517,351 - CA264_10895 0.62 -0.2 2,517,416 - CA264_10895 0.71 -0.9 2,517,538 + CA264_10895 0.89 +0.3 2,517,607 + +0.6 2,517,607 + -1.2 2,517,608 - -0.7 2,517,613 + +0.5 2,517,613 + -0.0 2,517,613 + +0.3 2,517,613 + +0.3 2,517,614 - -0.9 2,517,651 + +0.1 2,517,651 + +1.7 2,517,651 + +0.3 2,517,651 + +0.3 2,517,652 - -0.1 2,517,652 - -2.2 2,517,652 - -0.6 2,517,652 - -0.9 2,517,652 - -0.7 2,517,652 - -1.4 2,517,652 - +1.2 2,517,656 - +0.1 2,517,674 - -0.4 2,517,675 + -0.5
Or see this region's nucleotide sequence