Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08285 and CA264_08290 are separated by 5 nucleotides CA264_08290 and CA264_08295 are separated by 7 nucleotides CA264_08295 and CA264_08300 are separated by 143 nucleotides
CA264_08285: CA264_08285 - aminotransferase, at 1,914,238 to 1,915,488
_08285
CA264_08290: CA264_08290 - Fe-S metabolism protein SufE, at 1,915,494 to 1,915,922
_08290
CA264_08295: CA264_08295 - FeS assembly SUF system protein, at 1,915,930 to 1,916,241
_08295
CA264_08300: CA264_08300 - phosphohydrolase, at 1,916,385 to 1,917,236
_08300
Position (kb)
1915
1916 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1914.537 kb on + strand, within CA264_08285 at 1914.781 kb on + strand, within CA264_08285 at 1914.781 kb on + strand, within CA264_08285 at 1914.781 kb on + strand, within CA264_08285 at 1914.782 kb on - strand, within CA264_08285 at 1914.782 kb on - strand, within CA264_08285 at 1914.786 kb on - strand, within CA264_08285 at 1914.896 kb on + strand, within CA264_08285 at 1914.896 kb on + strand, within CA264_08285 at 1914.902 kb on + strand, within CA264_08285 at 1914.902 kb on + strand, within CA264_08285 at 1914.903 kb on - strand, within CA264_08285 at 1914.949 kb on + strand, within CA264_08285 at 1915.063 kb on + strand, within CA264_08285 at 1915.064 kb on - strand, within CA264_08285 at 1915.065 kb on + strand, within CA264_08285 at 1915.199 kb on - strand, within CA264_08285 at 1915.307 kb on + strand, within CA264_08285 at 1915.379 kb on - strand at 1915.381 kb on + strand at 1915.381 kb on + strand at 1915.382 kb on - strand at 1915.439 kb on + strand at 1915.482 kb on - strand at 1915.563 kb on + strand, within CA264_08290 at 1915.564 kb on - strand, within CA264_08290 at 1915.564 kb on - strand, within CA264_08290 at 1915.569 kb on + strand, within CA264_08290 at 1915.569 kb on + strand, within CA264_08290 at 1915.570 kb on - strand, within CA264_08290 at 1915.658 kb on - strand, within CA264_08290 at 1915.747 kb on + strand, within CA264_08290 at 1915.756 kb on + strand, within CA264_08290 at 1915.797 kb on + strand, within CA264_08290 at 1915.798 kb on - strand, within CA264_08290 at 1915.920 kb on + strand at 1915.926 kb on + strand at 1915.958 kb on + strand at 1915.959 kb on - strand at 1916.004 kb on + strand, within CA264_08295 at 1916.004 kb on + strand, within CA264_08295 at 1916.008 kb on + strand, within CA264_08295 at 1916.009 kb on - strand, within CA264_08295 at 1916.025 kb on - strand, within CA264_08295 at 1916.025 kb on - strand, within CA264_08295 at 1916.025 kb on - strand, within CA264_08295 at 1916.026 kb on + strand, within CA264_08295 at 1916.063 kb on + strand, within CA264_08295 at 1916.064 kb on - strand, within CA264_08295 at 1916.076 kb on + strand, within CA264_08295 at 1916.076 kb on + strand, within CA264_08295 at 1916.121 kb on - strand, within CA264_08295 at 1916.200 kb on - strand, within CA264_08295 at 1916.245 kb on - strand at 1916.415 kb on - strand at 1916.473 kb on - strand, within CA264_08300 at 1916.558 kb on + strand, within CA264_08300 at 1916.580 kb on + strand, within CA264_08300 at 1916.611 kb on + strand, within CA264_08300 at 1916.758 kb on + strand, within CA264_08300 at 1916.759 kb on - strand, within CA264_08300 at 1916.759 kb on - strand, within CA264_08300 at 1916.776 kb on + strand, within CA264_08300 at 1916.777 kb on - strand, within CA264_08300 at 1916.778 kb on + strand, within CA264_08300 at 1916.779 kb on - strand, within CA264_08300 at 1916.789 kb on + strand, within CA264_08300 at 1916.806 kb on + strand, within CA264_08300 at 1916.807 kb on - strand, within CA264_08300 at 1916.823 kb on + strand, within CA264_08300 at 1916.824 kb on - strand, within CA264_08300 at 1916.825 kb on + strand, within CA264_08300 at 1916.826 kb on - strand, within CA264_08300 at 1916.826 kb on - strand, within CA264_08300 at 1916.830 kb on + strand, within CA264_08300 at 1916.911 kb on + strand, within CA264_08300 at 1916.912 kb on - strand, within CA264_08300 at 1916.912 kb on - strand, within CA264_08300
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 1,914,537 + CA264_08285 0.24 -1.5 1,914,781 + CA264_08285 0.43 +1.3 1,914,781 + CA264_08285 0.43 -0.4 1,914,781 + CA264_08285 0.43 -0.1 1,914,782 - CA264_08285 0.43 -0.7 1,914,782 - CA264_08285 0.43 -0.5 1,914,786 - CA264_08285 0.44 -0.7 1,914,896 + CA264_08285 0.53 +0.1 1,914,896 + CA264_08285 0.53 +0.2 1,914,902 + CA264_08285 0.53 -0.5 1,914,902 + CA264_08285 0.53 -0.2 1,914,903 - CA264_08285 0.53 +0.7 1,914,949 + CA264_08285 0.57 +0.2 1,915,063 + CA264_08285 0.66 +0.5 1,915,064 - CA264_08285 0.66 +0.0 1,915,065 + CA264_08285 0.66 -0.1 1,915,199 - CA264_08285 0.77 -0.2 1,915,307 + CA264_08285 0.85 +0.9 1,915,379 - -0.3 1,915,381 + +0.3 1,915,381 + -0.3 1,915,382 - -1.3 1,915,439 + -0.1 1,915,482 - +0.1 1,915,563 + CA264_08290 0.16 -0.0 1,915,564 - CA264_08290 0.16 +0.4 1,915,564 - CA264_08290 0.16 -0.6 1,915,569 + CA264_08290 0.17 -0.1 1,915,569 + CA264_08290 0.17 +0.2 1,915,570 - CA264_08290 0.18 +0.7 1,915,658 - CA264_08290 0.38 -0.1 1,915,747 + CA264_08290 0.59 -0.1 1,915,756 + CA264_08290 0.61 +0.1 1,915,797 + CA264_08290 0.71 -0.9 1,915,798 - CA264_08290 0.71 -0.2 1,915,920 + +0.5 1,915,926 + +0.2 1,915,958 + -0.3 1,915,959 - -0.3 1,916,004 + CA264_08295 0.24 -0.5 1,916,004 + CA264_08295 0.24 +0.1 1,916,008 + CA264_08295 0.25 -0.2 1,916,009 - CA264_08295 0.25 -1.9 1,916,025 - CA264_08295 0.30 -0.2 1,916,025 - CA264_08295 0.30 +1.0 1,916,025 - CA264_08295 0.30 +0.8 1,916,026 + CA264_08295 0.31 -0.2 1,916,063 + CA264_08295 0.43 -0.1 1,916,064 - CA264_08295 0.43 +2.5 1,916,076 + CA264_08295 0.47 +0.1 1,916,076 + CA264_08295 0.47 +1.1 1,916,121 - CA264_08295 0.61 -1.9 1,916,200 - CA264_08295 0.87 -3.3 1,916,245 - +1.6 1,916,415 - -1.5 1,916,473 - CA264_08300 0.10 +1.2 1,916,558 + CA264_08300 0.20 +0.1 1,916,580 + CA264_08300 0.23 +0.4 1,916,611 + CA264_08300 0.27 +0.1 1,916,758 + CA264_08300 0.44 -0.0 1,916,759 - CA264_08300 0.44 -2.0 1,916,759 - CA264_08300 0.44 +0.2 1,916,776 + CA264_08300 0.46 +1.1 1,916,777 - CA264_08300 0.46 -2.3 1,916,778 + CA264_08300 0.46 -1.4 1,916,779 - CA264_08300 0.46 +0.0 1,916,789 + CA264_08300 0.47 +0.0 1,916,806 + CA264_08300 0.49 -0.3 1,916,807 - CA264_08300 0.50 -0.7 1,916,823 + CA264_08300 0.51 +0.3 1,916,824 - CA264_08300 0.52 +0.1 1,916,825 + CA264_08300 0.52 -1.0 1,916,826 - CA264_08300 0.52 -0.2 1,916,826 - CA264_08300 0.52 -0.3 1,916,830 + CA264_08300 0.52 -0.9 1,916,911 + CA264_08300 0.62 +0.4 1,916,912 - CA264_08300 0.62 +0.3 1,916,912 - CA264_08300 0.62 +0.0
Or see this region's nucleotide sequence