Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08095 and CA264_08100 are separated by 66 nucleotides CA264_08100 and CA264_08105 are separated by 84 nucleotides CA264_08105 and CA264_08110 are separated by 114 nucleotides CA264_08110 and CA264_08115 are separated by 18 nucleotides
CA264_08095: CA264_08095 - ABC transporter permease, at 1,868,906 to 1,869,634
_08095
CA264_08100: CA264_08100 - ABC transporter ATP-binding protein, at 1,869,701 to 1,870,495
_08100
CA264_08105: CA264_08105 - NupC/NupG family nucleoside CNT transporter, at 1,870,580 to 1,871,881
_08105
CA264_08110: CA264_08110 - hypothetical protein, at 1,871,996 to 1,872,601
_08110
CA264_08115: CA264_08115 - electron transfer flavoprotein subunit alpha, at 1,872,620 to 1,873,597
_08115
Position (kb)
1870
1871
1872 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1869.588 kb on + strand at 1869.589 kb on - strand at 1869.589 kb on - strand at 1869.611 kb on - strand at 1869.712 kb on - strand at 1869.721 kb on - strand at 1869.721 kb on - strand at 1869.721 kb on - strand at 1869.751 kb on - strand at 1869.826 kb on - strand, within CA264_08100 at 1869.843 kb on + strand, within CA264_08100 at 1869.844 kb on - strand, within CA264_08100 at 1869.844 kb on - strand, within CA264_08100 at 1869.852 kb on + strand, within CA264_08100 at 1869.891 kb on - strand, within CA264_08100 at 1869.940 kb on - strand, within CA264_08100 at 1869.940 kb on - strand, within CA264_08100 at 1870.271 kb on - strand, within CA264_08100 at 1870.493 kb on + strand at 1870.494 kb on - strand at 1870.494 kb on - strand at 1870.494 kb on - strand at 1870.494 kb on - strand at 1870.494 kb on - strand at 1870.494 kb on - strand at 1870.494 kb on - strand at 1870.505 kb on + strand at 1870.506 kb on - strand at 1870.563 kb on + strand at 1870.563 kb on + strand at 1870.567 kb on + strand at 1870.568 kb on - strand at 1870.568 kb on - strand at 1870.591 kb on - strand at 1870.591 kb on - strand at 1870.622 kb on - strand at 1870.673 kb on - strand at 1870.756 kb on - strand, within CA264_08105 at 1870.903 kb on + strand, within CA264_08105 at 1870.939 kb on - strand, within CA264_08105 at 1870.996 kb on + strand, within CA264_08105 at 1871.028 kb on + strand, within CA264_08105 at 1871.044 kb on + strand, within CA264_08105 at 1871.045 kb on - strand, within CA264_08105 at 1871.242 kb on + strand, within CA264_08105 at 1871.313 kb on + strand, within CA264_08105 at 1871.313 kb on + strand, within CA264_08105 at 1871.314 kb on - strand, within CA264_08105 at 1871.494 kb on + strand, within CA264_08105 at 1871.878 kb on - strand at 1871.884 kb on + strand at 1871.884 kb on + strand at 1871.884 kb on + strand at 1871.885 kb on - strand at 1871.885 kb on - strand at 1871.885 kb on - strand at 1871.885 kb on - strand at 1871.885 kb on - strand at 1871.982 kb on + strand at 1871.983 kb on - strand at 1872.042 kb on + strand at 1872.131 kb on - strand, within CA264_08110 at 1872.196 kb on + strand, within CA264_08110 at 1872.196 kb on + strand, within CA264_08110 at 1872.201 kb on - strand, within CA264_08110 at 1872.203 kb on - strand, within CA264_08110 at 1872.230 kb on + strand, within CA264_08110 at 1872.237 kb on + strand, within CA264_08110 at 1872.237 kb on + strand, within CA264_08110 at 1872.237 kb on + strand, within CA264_08110 at 1872.238 kb on - strand, within CA264_08110 at 1872.241 kb on + strand, within CA264_08110 at 1872.336 kb on + strand, within CA264_08110 at 1872.383 kb on + strand, within CA264_08110 at 1872.384 kb on - strand, within CA264_08110 at 1872.410 kb on - strand, within CA264_08110 at 1872.443 kb on + strand, within CA264_08110 at 1872.614 kb on + strand at 1872.621 kb on + strand at 1872.629 kb on + strand at 1872.730 kb on + strand, within CA264_08115 at 1872.790 kb on + strand, within CA264_08115 at 1872.791 kb on - strand, within CA264_08115 at 1872.794 kb on + strand, within CA264_08115 at 1872.804 kb on + strand, within CA264_08115 at 1872.805 kb on - strand, within CA264_08115 at 1872.805 kb on - strand, within CA264_08115 at 1872.805 kb on - strand, within CA264_08115 at 1872.824 kb on - strand, within CA264_08115 at 1872.827 kb on - strand, within CA264_08115
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 1,869,588 + -0.5 1,869,589 - +1.4 1,869,589 - -0.4 1,869,611 - -0.0 1,869,712 - +2.7 1,869,721 - +0.1 1,869,721 - +0.3 1,869,721 - -0.5 1,869,751 - +0.2 1,869,826 - CA264_08100 0.16 +1.2 1,869,843 + CA264_08100 0.18 +0.0 1,869,844 - CA264_08100 0.18 +0.3 1,869,844 - CA264_08100 0.18 -0.1 1,869,852 + CA264_08100 0.19 -0.2 1,869,891 - CA264_08100 0.24 +1.8 1,869,940 - CA264_08100 0.30 +0.4 1,869,940 - CA264_08100 0.30 -0.3 1,870,271 - CA264_08100 0.72 -0.3 1,870,493 + +0.7 1,870,494 - -0.2 1,870,494 - -0.0 1,870,494 - -1.1 1,870,494 - -0.2 1,870,494 - +0.1 1,870,494 - -0.2 1,870,494 - +0.1 1,870,505 + -0.4 1,870,506 - +1.0 1,870,563 + +0.2 1,870,563 + +0.1 1,870,567 + -0.4 1,870,568 - +0.4 1,870,568 - -0.1 1,870,591 - -0.9 1,870,591 - +0.6 1,870,622 - -0.7 1,870,673 - -1.2 1,870,756 - CA264_08105 0.14 -1.7 1,870,903 + CA264_08105 0.25 -0.3 1,870,939 - CA264_08105 0.28 -1.0 1,870,996 + CA264_08105 0.32 +0.8 1,871,028 + CA264_08105 0.34 -0.8 1,871,044 + CA264_08105 0.36 +0.5 1,871,045 - CA264_08105 0.36 -0.3 1,871,242 + CA264_08105 0.51 -0.3 1,871,313 + CA264_08105 0.56 -0.9 1,871,313 + CA264_08105 0.56 -0.4 1,871,314 - CA264_08105 0.56 -1.5 1,871,494 + CA264_08105 0.70 -0.5 1,871,878 - +1.3 1,871,884 + +0.6 1,871,884 + -0.8 1,871,884 + -0.0 1,871,885 - +0.5 1,871,885 - +0.8 1,871,885 - +0.2 1,871,885 - +0.0 1,871,885 - +1.1 1,871,982 + -0.9 1,871,983 - -1.9 1,872,042 + +0.2 1,872,131 - CA264_08110 0.22 -0.7 1,872,196 + CA264_08110 0.33 -0.9 1,872,196 + CA264_08110 0.33 +0.5 1,872,201 - CA264_08110 0.34 -2.1 1,872,203 - CA264_08110 0.34 +0.1 1,872,230 + CA264_08110 0.39 -0.9 1,872,237 + CA264_08110 0.40 -0.2 1,872,237 + CA264_08110 0.40 -1.2 1,872,237 + CA264_08110 0.40 -1.2 1,872,238 - CA264_08110 0.40 -1.7 1,872,241 + CA264_08110 0.40 -0.5 1,872,336 + CA264_08110 0.56 -1.7 1,872,383 + CA264_08110 0.64 -0.7 1,872,384 - CA264_08110 0.64 -0.7 1,872,410 - CA264_08110 0.68 -2.0 1,872,443 + CA264_08110 0.74 -1.1 1,872,614 + +0.6 1,872,621 + -0.7 1,872,629 + +0.1 1,872,730 + CA264_08115 0.11 +0.7 1,872,790 + CA264_08115 0.17 -0.5 1,872,791 - CA264_08115 0.17 +1.7 1,872,794 + CA264_08115 0.18 -0.1 1,872,804 + CA264_08115 0.19 -0.2 1,872,805 - CA264_08115 0.19 +0.3 1,872,805 - CA264_08115 0.19 -0.9 1,872,805 - CA264_08115 0.19 +0.2 1,872,824 - CA264_08115 0.21 +0.8 1,872,827 - CA264_08115 0.21 +0.2
Or see this region's nucleotide sequence