Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06405 and CA264_06410 are separated by 87 nucleotides CA264_06410 and CA264_06415 are separated by 71 nucleotides CA264_06415 and CA264_06420 are separated by 91 nucleotides CA264_06420 and CA264_06425 are separated by 71 nucleotides
CA264_06405: CA264_06405 - VWA domain-containing protein, at 1,486,830 to 1,487,879
_06405
CA264_06410: CA264_06410 - YggS family pyridoxal phosphate enzyme, at 1,487,967 to 1,488,650
_06410
CA264_06415: CA264_06415 - glycerophosphodiester phosphodiesterase, at 1,488,722 to 1,489,639
_06415
CA264_06420: CA264_06420 - hypothetical protein, at 1,489,731 to 1,490,177
_06420
CA264_06425: CA264_06425 - DUF423 domain-containing protein, at 1,490,249 to 1,490,626
_06425
Position (kb)
1488
1489
1490 Strain fitness (log2 ratio)
-2
-1
0
1 at 1487.797 kb on + strand at 1487.828 kb on + strand at 1487.930 kb on - strand at 1487.930 kb on - strand at 1487.930 kb on - strand at 1487.946 kb on - strand at 1487.966 kb on + strand at 1487.976 kb on - strand at 1487.984 kb on + strand at 1487.985 kb on - strand at 1487.985 kb on - strand at 1487.989 kb on + strand at 1488.075 kb on + strand, within CA264_06410 at 1488.075 kb on + strand, within CA264_06410 at 1488.107 kb on + strand, within CA264_06410 at 1488.193 kb on + strand, within CA264_06410 at 1488.194 kb on - strand, within CA264_06410 at 1488.198 kb on + strand, within CA264_06410 at 1488.198 kb on + strand, within CA264_06410 at 1488.198 kb on + strand, within CA264_06410 at 1488.215 kb on - strand, within CA264_06410 at 1488.218 kb on + strand, within CA264_06410 at 1488.219 kb on - strand, within CA264_06410 at 1488.264 kb on - strand, within CA264_06410 at 1488.299 kb on + strand, within CA264_06410 at 1488.342 kb on + strand, within CA264_06410 at 1488.343 kb on - strand, within CA264_06410 at 1488.377 kb on - strand, within CA264_06410 at 1488.391 kb on - strand, within CA264_06410 at 1488.391 kb on - strand, within CA264_06410 at 1488.405 kb on + strand, within CA264_06410 at 1488.433 kb on + strand, within CA264_06410 at 1488.639 kb on + strand at 1488.640 kb on - strand at 1488.644 kb on + strand at 1488.645 kb on - strand at 1488.649 kb on - strand at 1488.672 kb on - strand at 1488.672 kb on - strand at 1488.672 kb on - strand at 1488.679 kb on - strand at 1488.683 kb on - strand at 1488.713 kb on - strand at 1488.713 kb on - strand at 1488.713 kb on - strand at 1488.713 kb on - strand at 1488.713 kb on - strand at 1488.716 kb on + strand at 1488.717 kb on - strand at 1488.717 kb on - strand at 1488.717 kb on - strand at 1488.721 kb on + strand at 1488.808 kb on - strand at 1488.817 kb on + strand, within CA264_06415 at 1488.981 kb on - strand, within CA264_06415 at 1489.023 kb on + strand, within CA264_06415 at 1489.023 kb on + strand, within CA264_06415 at 1489.024 kb on - strand, within CA264_06415 at 1489.055 kb on + strand, within CA264_06415 at 1489.067 kb on + strand, within CA264_06415 at 1489.067 kb on + strand, within CA264_06415 at 1489.108 kb on + strand, within CA264_06415 at 1489.109 kb on - strand, within CA264_06415 at 1489.143 kb on - strand, within CA264_06415 at 1489.143 kb on - strand, within CA264_06415 at 1489.144 kb on + strand, within CA264_06415 at 1489.145 kb on - strand, within CA264_06415 at 1489.260 kb on - strand, within CA264_06415 at 1489.333 kb on + strand, within CA264_06415 at 1489.428 kb on + strand, within CA264_06415 at 1489.429 kb on - strand, within CA264_06415 at 1489.481 kb on + strand, within CA264_06415 at 1489.482 kb on - strand, within CA264_06415 at 1489.482 kb on - strand, within CA264_06415 at 1489.537 kb on + strand, within CA264_06415 at 1489.614 kb on - strand at 1489.635 kb on + strand at 1489.635 kb on + strand at 1489.683 kb on + strand at 1489.703 kb on + strand at 1489.707 kb on + strand at 1489.707 kb on + strand at 1489.717 kb on - strand at 1489.765 kb on - strand at 1489.765 kb on - strand at 1489.862 kb on + strand, within CA264_06420 at 1489.933 kb on - strand, within CA264_06420 at 1489.989 kb on + strand, within CA264_06420 at 1489.989 kb on + strand, within CA264_06420 at 1489.989 kb on + strand, within CA264_06420 at 1489.989 kb on + strand, within CA264_06420 at 1489.990 kb on - strand, within CA264_06420 at 1490.062 kb on + strand, within CA264_06420 at 1490.062 kb on + strand, within CA264_06420 at 1490.121 kb on + strand, within CA264_06420 at 1490.152 kb on + strand at 1490.156 kb on - strand at 1490.175 kb on + strand at 1490.205 kb on + strand at 1490.219 kb on + strand at 1490.219 kb on + strand at 1490.220 kb on - strand at 1490.223 kb on + strand at 1490.225 kb on + strand at 1490.232 kb on + strand at 1490.266 kb on - strand at 1490.297 kb on - strand, within CA264_06425 at 1490.308 kb on - strand, within CA264_06425 at 1490.396 kb on + strand, within CA264_06425 at 1490.397 kb on - strand, within CA264_06425 at 1490.401 kb on + strand, within CA264_06425 at 1490.402 kb on - strand, within CA264_06425 at 1490.513 kb on + strand, within CA264_06425 at 1490.514 kb on - strand, within CA264_06425 at 1490.624 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 1,487,797 + -1.4 1,487,828 + -1.7 1,487,930 - -0.7 1,487,930 - -0.6 1,487,930 - -0.1 1,487,946 - +0.4 1,487,966 + -0.7 1,487,976 - -0.2 1,487,984 + -0.0 1,487,985 - +1.4 1,487,985 - +0.3 1,487,989 + +0.4 1,488,075 + CA264_06410 0.16 +0.1 1,488,075 + CA264_06410 0.16 +0.4 1,488,107 + CA264_06410 0.20 -0.2 1,488,193 + CA264_06410 0.33 +0.9 1,488,194 - CA264_06410 0.33 +0.8 1,488,198 + CA264_06410 0.34 -0.4 1,488,198 + CA264_06410 0.34 -0.3 1,488,198 + CA264_06410 0.34 +0.1 1,488,215 - CA264_06410 0.36 -1.1 1,488,218 + CA264_06410 0.37 -0.4 1,488,219 - CA264_06410 0.37 +0.9 1,488,264 - CA264_06410 0.43 +0.5 1,488,299 + CA264_06410 0.49 +0.8 1,488,342 + CA264_06410 0.55 +0.2 1,488,343 - CA264_06410 0.55 -0.4 1,488,377 - CA264_06410 0.60 -1.2 1,488,391 - CA264_06410 0.62 +0.5 1,488,391 - CA264_06410 0.62 +0.3 1,488,405 + CA264_06410 0.64 +1.5 1,488,433 + CA264_06410 0.68 -0.9 1,488,639 + +1.5 1,488,640 - +0.2 1,488,644 + +0.2 1,488,645 - -0.3 1,488,649 - +0.1 1,488,672 - -0.1 1,488,672 - -1.4 1,488,672 - -0.6 1,488,679 - -0.3 1,488,683 - -0.6 1,488,713 - +0.3 1,488,713 - -0.5 1,488,713 - -0.5 1,488,713 - +0.4 1,488,713 - -0.2 1,488,716 + -0.7 1,488,717 - +0.9 1,488,717 - +0.5 1,488,717 - +0.4 1,488,721 + +0.1 1,488,808 - -0.4 1,488,817 + CA264_06415 0.10 -0.4 1,488,981 - CA264_06415 0.28 -0.4 1,489,023 + CA264_06415 0.33 -0.8 1,489,023 + CA264_06415 0.33 -1.2 1,489,024 - CA264_06415 0.33 +0.4 1,489,055 + CA264_06415 0.36 -0.5 1,489,067 + CA264_06415 0.38 -2.2 1,489,067 + CA264_06415 0.38 +1.1 1,489,108 + CA264_06415 0.42 +0.1 1,489,109 - CA264_06415 0.42 -0.9 1,489,143 - CA264_06415 0.46 +0.1 1,489,143 - CA264_06415 0.46 -1.2 1,489,144 + CA264_06415 0.46 -0.1 1,489,145 - CA264_06415 0.46 +0.3 1,489,260 - CA264_06415 0.59 +0.1 1,489,333 + CA264_06415 0.67 -1.7 1,489,428 + CA264_06415 0.77 -1.3 1,489,429 - CA264_06415 0.77 -0.3 1,489,481 + CA264_06415 0.83 +0.1 1,489,482 - CA264_06415 0.83 -0.3 1,489,482 - CA264_06415 0.83 +0.9 1,489,537 + CA264_06415 0.89 -0.5 1,489,614 - +0.3 1,489,635 + -0.3 1,489,635 + +0.0 1,489,683 + -0.5 1,489,703 + -1.2 1,489,707 + +0.2 1,489,707 + -0.9 1,489,717 - +0.4 1,489,765 - -0.0 1,489,765 - -0.3 1,489,862 + CA264_06420 0.29 -0.3 1,489,933 - CA264_06420 0.45 +1.3 1,489,989 + CA264_06420 0.58 -0.4 1,489,989 + CA264_06420 0.58 -0.1 1,489,989 + CA264_06420 0.58 +0.8 1,489,989 + CA264_06420 0.58 -1.7 1,489,990 - CA264_06420 0.58 +1.6 1,490,062 + CA264_06420 0.74 -0.8 1,490,062 + CA264_06420 0.74 +0.6 1,490,121 + CA264_06420 0.87 +0.3 1,490,152 + +0.1 1,490,156 - -0.6 1,490,175 + -0.1 1,490,205 + -0.7 1,490,219 + +0.1 1,490,219 + -0.7 1,490,220 - -1.0 1,490,223 + -0.2 1,490,225 + +0.1 1,490,232 + -0.5 1,490,266 - -0.3 1,490,297 - CA264_06425 0.13 +0.5 1,490,308 - CA264_06425 0.16 -0.1 1,490,396 + CA264_06425 0.39 +0.3 1,490,397 - CA264_06425 0.39 +0.0 1,490,401 + CA264_06425 0.40 +0.1 1,490,402 - CA264_06425 0.40 -0.0 1,490,513 + CA264_06425 0.70 -0.7 1,490,514 - CA264_06425 0.70 -0.2 1,490,624 + +0.2
Or see this region's nucleotide sequence