Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06210 and CA264_06215 are separated by 3 nucleotides CA264_06215 and CA264_06220 are separated by 182 nucleotides CA264_06220 and CA264_06225 are separated by 21 nucleotides
CA264_06210: CA264_06210 - glutathione synthase, at 1,445,504 to 1,446,979
_06210
CA264_06215: CA264_06215 - peptidase-C39 like family protein, at 1,446,983 to 1,447,705
_06215
CA264_06220: CA264_06220 - hypothetical protein, at 1,447,888 to 1,448,574
_06220
CA264_06225: CA264_06225 - argininosuccinate lyase, at 1,448,596 to 1,449,933
_06225
Position (kb)
1446
1447
1448 Strain fitness (log2 ratio)
-2
-1
0
1 at 1446.167 kb on + strand, within CA264_06210 at 1446.210 kb on + strand, within CA264_06210 at 1446.210 kb on + strand, within CA264_06210 at 1446.214 kb on + strand, within CA264_06210 at 1446.214 kb on + strand, within CA264_06210 at 1446.214 kb on + strand, within CA264_06210 at 1446.214 kb on + strand, within CA264_06210 at 1446.214 kb on + strand, within CA264_06210 at 1446.243 kb on - strand, within CA264_06210 at 1446.243 kb on - strand, within CA264_06210 at 1446.244 kb on + strand, within CA264_06210 at 1446.244 kb on + strand, within CA264_06210 at 1446.244 kb on + strand, within CA264_06210 at 1446.245 kb on - strand, within CA264_06210 at 1446.245 kb on - strand, within CA264_06210 at 1446.245 kb on - strand, within CA264_06210 at 1446.289 kb on + strand, within CA264_06210 at 1446.304 kb on - strand, within CA264_06210 at 1446.383 kb on + strand, within CA264_06210 at 1446.402 kb on + strand, within CA264_06210 at 1446.402 kb on + strand, within CA264_06210 at 1446.403 kb on - strand, within CA264_06210 at 1446.403 kb on - strand, within CA264_06210 at 1446.601 kb on + strand, within CA264_06210 at 1446.616 kb on - strand, within CA264_06210 at 1446.642 kb on + strand, within CA264_06210 at 1446.729 kb on - strand, within CA264_06210 at 1446.810 kb on + strand, within CA264_06210 at 1446.897 kb on + strand at 1446.898 kb on - strand at 1446.968 kb on + strand at 1446.989 kb on + strand at 1447.095 kb on + strand, within CA264_06215 at 1447.095 kb on + strand, within CA264_06215 at 1447.095 kb on + strand, within CA264_06215 at 1447.096 kb on - strand, within CA264_06215 at 1447.096 kb on - strand, within CA264_06215 at 1447.140 kb on - strand, within CA264_06215 at 1447.225 kb on + strand, within CA264_06215 at 1447.266 kb on + strand, within CA264_06215 at 1447.266 kb on + strand, within CA264_06215 at 1447.266 kb on + strand, within CA264_06215 at 1447.267 kb on - strand, within CA264_06215 at 1447.463 kb on - strand, within CA264_06215 at 1447.500 kb on + strand, within CA264_06215 at 1447.501 kb on - strand, within CA264_06215 at 1447.507 kb on - strand, within CA264_06215 at 1447.577 kb on + strand, within CA264_06215 at 1447.595 kb on - strand, within CA264_06215 at 1447.624 kb on + strand, within CA264_06215 at 1447.624 kb on + strand, within CA264_06215 at 1447.635 kb on + strand at 1447.689 kb on - strand at 1447.712 kb on + strand at 1447.713 kb on - strand at 1447.732 kb on + strand at 1447.732 kb on + strand at 1447.732 kb on + strand at 1447.860 kb on + strand at 1447.862 kb on + strand at 1447.908 kb on - strand at 1448.023 kb on + strand, within CA264_06220 at 1448.024 kb on - strand, within CA264_06220 at 1448.074 kb on + strand, within CA264_06220 at 1448.202 kb on + strand, within CA264_06220 at 1448.202 kb on + strand, within CA264_06220 at 1448.286 kb on - strand, within CA264_06220 at 1448.332 kb on + strand, within CA264_06220 at 1448.547 kb on + strand at 1448.548 kb on - strand at 1448.582 kb on + strand at 1448.582 kb on + strand at 1448.583 kb on - strand at 1448.592 kb on + strand at 1448.592 kb on + strand at 1448.592 kb on + strand at 1448.597 kb on + strand at 1448.621 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 1,446,167 + CA264_06210 0.45 -0.6 1,446,210 + CA264_06210 0.48 -0.6 1,446,210 + CA264_06210 0.48 +0.1 1,446,214 + CA264_06210 0.48 -1.5 1,446,214 + CA264_06210 0.48 -0.5 1,446,214 + CA264_06210 0.48 -0.1 1,446,214 + CA264_06210 0.48 -1.5 1,446,214 + CA264_06210 0.48 +0.6 1,446,243 - CA264_06210 0.50 -0.2 1,446,243 - CA264_06210 0.50 +1.3 1,446,244 + CA264_06210 0.50 -0.2 1,446,244 + CA264_06210 0.50 -1.0 1,446,244 + CA264_06210 0.50 -0.1 1,446,245 - CA264_06210 0.50 +1.2 1,446,245 - CA264_06210 0.50 -0.2 1,446,245 - CA264_06210 0.50 +0.8 1,446,289 + CA264_06210 0.53 +0.1 1,446,304 - CA264_06210 0.54 -0.1 1,446,383 + CA264_06210 0.60 -0.2 1,446,402 + CA264_06210 0.61 +1.4 1,446,402 + CA264_06210 0.61 -0.3 1,446,403 - CA264_06210 0.61 -0.1 1,446,403 - CA264_06210 0.61 -1.8 1,446,601 + CA264_06210 0.74 +1.0 1,446,616 - CA264_06210 0.75 -1.0 1,446,642 + CA264_06210 0.77 +0.4 1,446,729 - CA264_06210 0.83 -0.6 1,446,810 + CA264_06210 0.88 -0.6 1,446,897 + +0.6 1,446,898 - -0.3 1,446,968 + -0.6 1,446,989 + -1.0 1,447,095 + CA264_06215 0.15 -0.2 1,447,095 + CA264_06215 0.15 -1.0 1,447,095 + CA264_06215 0.15 -0.2 1,447,096 - CA264_06215 0.16 -1.1 1,447,096 - CA264_06215 0.16 +0.5 1,447,140 - CA264_06215 0.22 -0.8 1,447,225 + CA264_06215 0.33 -1.3 1,447,266 + CA264_06215 0.39 -0.1 1,447,266 + CA264_06215 0.39 +0.1 1,447,266 + CA264_06215 0.39 -1.0 1,447,267 - CA264_06215 0.39 +0.4 1,447,463 - CA264_06215 0.66 +1.1 1,447,500 + CA264_06215 0.72 +0.6 1,447,501 - CA264_06215 0.72 +1.3 1,447,507 - CA264_06215 0.72 -0.2 1,447,577 + CA264_06215 0.82 -0.0 1,447,595 - CA264_06215 0.85 -0.2 1,447,624 + CA264_06215 0.89 -0.4 1,447,624 + CA264_06215 0.89 -0.6 1,447,635 + -1.1 1,447,689 - -0.2 1,447,712 + -0.0 1,447,713 - +0.2 1,447,732 + +0.3 1,447,732 + -0.1 1,447,732 + +1.3 1,447,860 + +0.2 1,447,862 + +0.0 1,447,908 - +0.5 1,448,023 + CA264_06220 0.20 -0.5 1,448,024 - CA264_06220 0.20 -1.7 1,448,074 + CA264_06220 0.27 -1.1 1,448,202 + CA264_06220 0.46 -0.4 1,448,202 + CA264_06220 0.46 -0.4 1,448,286 - CA264_06220 0.58 -1.0 1,448,332 + CA264_06220 0.65 -0.2 1,448,547 + +0.3 1,448,548 - +0.2 1,448,582 + -1.3 1,448,582 + +0.1 1,448,583 - -0.3 1,448,592 + -0.6 1,448,592 + -0.7 1,448,592 + -0.2 1,448,597 + +0.2 1,448,621 + +1.5
Or see this region's nucleotide sequence