Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06135 and CA264_06140 are separated by 202 nucleotides CA264_06140 and CA264_06145 are separated by 23 nucleotides CA264_06145 and CA264_06150 overlap by 9 nucleotides CA264_06150 and CA264_06155 are separated by 15 nucleotides
CA264_06135: CA264_06135 - alanine--tRNA ligase, at 1,432,299 to 1,434,935
_06135
CA264_06140: CA264_06140 - MerR family transcriptional regulator, at 1,435,138 to 1,435,485
_06140
CA264_06145: CA264_06145 - DNA protecting protein DprA, at 1,435,509 to 1,436,624
_06145
CA264_06150: CA264_06150 - hypothetical protein, at 1,436,616 to 1,437,560
_06150
CA264_06155: CA264_06155 - cation diffusion facilitator family transporter, at 1,437,576 to 1,438,562
_06155
Position (kb)
1435
1436
1437 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1434.947 kb on - strand at 1434.955 kb on - strand at 1434.955 kb on - strand at 1434.963 kb on - strand at 1434.971 kb on - strand at 1435.121 kb on - strand at 1435.174 kb on + strand, within CA264_06140 at 1435.174 kb on + strand, within CA264_06140 at 1435.174 kb on + strand, within CA264_06140 at 1435.175 kb on - strand, within CA264_06140 at 1435.175 kb on - strand, within CA264_06140 at 1435.176 kb on + strand, within CA264_06140 at 1435.177 kb on - strand, within CA264_06140 at 1435.177 kb on - strand, within CA264_06140 at 1435.177 kb on - strand, within CA264_06140 at 1435.288 kb on + strand, within CA264_06140 at 1435.318 kb on - strand, within CA264_06140 at 1435.351 kb on - strand, within CA264_06140 at 1435.484 kb on - strand at 1435.544 kb on + strand at 1435.545 kb on - strand at 1435.588 kb on + strand at 1435.594 kb on - strand at 1435.594 kb on - strand at 1435.750 kb on + strand, within CA264_06145 at 1435.751 kb on - strand, within CA264_06145 at 1435.767 kb on - strand, within CA264_06145 at 1435.824 kb on + strand, within CA264_06145 at 1435.864 kb on + strand, within CA264_06145 at 1435.865 kb on - strand, within CA264_06145 at 1435.873 kb on + strand, within CA264_06145 at 1435.874 kb on - strand, within CA264_06145 at 1435.889 kb on - strand, within CA264_06145 at 1435.896 kb on + strand, within CA264_06145 at 1435.925 kb on - strand, within CA264_06145 at 1435.943 kb on + strand, within CA264_06145 at 1435.944 kb on - strand, within CA264_06145 at 1436.080 kb on - strand, within CA264_06145 at 1436.204 kb on - strand, within CA264_06145 at 1436.260 kb on - strand, within CA264_06145 at 1436.352 kb on + strand, within CA264_06145 at 1436.352 kb on + strand, within CA264_06145 at 1436.434 kb on + strand, within CA264_06145 at 1436.539 kb on + strand at 1436.540 kb on - strand at 1436.564 kb on - strand at 1436.612 kb on + strand at 1436.613 kb on - strand at 1436.617 kb on + strand at 1436.617 kb on + strand at 1436.618 kb on - strand at 1436.653 kb on + strand at 1436.653 kb on + strand at 1436.709 kb on - strand at 1436.718 kb on - strand, within CA264_06150 at 1436.765 kb on + strand, within CA264_06150 at 1436.787 kb on + strand, within CA264_06150 at 1436.866 kb on - strand, within CA264_06150 at 1436.899 kb on - strand, within CA264_06150 at 1436.948 kb on + strand, within CA264_06150 at 1436.948 kb on + strand, within CA264_06150 at 1436.949 kb on - strand, within CA264_06150 at 1436.949 kb on - strand, within CA264_06150 at 1437.110 kb on - strand, within CA264_06150 at 1437.155 kb on + strand, within CA264_06150 at 1437.155 kb on + strand, within CA264_06150 at 1437.155 kb on + strand, within CA264_06150 at 1437.155 kb on + strand, within CA264_06150 at 1437.156 kb on - strand, within CA264_06150 at 1437.160 kb on + strand, within CA264_06150 at 1437.161 kb on - strand, within CA264_06150 at 1437.161 kb on - strand, within CA264_06150 at 1437.209 kb on - strand, within CA264_06150 at 1437.213 kb on + strand, within CA264_06150 at 1437.213 kb on + strand, within CA264_06150 at 1437.213 kb on + strand, within CA264_06150 at 1437.214 kb on - strand, within CA264_06150 at 1437.223 kb on - strand, within CA264_06150 at 1437.223 kb on - strand, within CA264_06150 at 1437.264 kb on - strand, within CA264_06150 at 1437.508 kb on + strand at 1437.508 kb on + strand at 1437.539 kb on + strand at 1437.539 kb on + strand at 1437.539 kb on + strand at 1437.539 kb on + strand at 1437.540 kb on - strand at 1437.543 kb on + strand at 1437.544 kb on - strand at 1437.577 kb on + strand at 1437.606 kb on + strand at 1437.606 kb on + strand at 1437.607 kb on - strand at 1437.607 kb on - strand at 1437.607 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 1,434,947 - -0.6 1,434,955 - +0.9 1,434,955 - +0.3 1,434,963 - -0.8 1,434,971 - -0.4 1,435,121 - -0.8 1,435,174 + CA264_06140 0.10 -1.1 1,435,174 + CA264_06140 0.10 -1.0 1,435,174 + CA264_06140 0.10 -2.1 1,435,175 - CA264_06140 0.11 -1.7 1,435,175 - CA264_06140 0.11 -1.4 1,435,176 + CA264_06140 0.11 -1.4 1,435,177 - CA264_06140 0.11 -1.2 1,435,177 - CA264_06140 0.11 -1.9 1,435,177 - CA264_06140 0.11 -2.0 1,435,288 + CA264_06140 0.43 -0.8 1,435,318 - CA264_06140 0.52 -0.3 1,435,351 - CA264_06140 0.61 -2.0 1,435,484 - +0.9 1,435,544 + +0.4 1,435,545 - -0.8 1,435,588 + -0.9 1,435,594 - +0.1 1,435,594 - -0.1 1,435,750 + CA264_06145 0.22 +0.2 1,435,751 - CA264_06145 0.22 -0.2 1,435,767 - CA264_06145 0.23 +0.2 1,435,824 + CA264_06145 0.28 +1.2 1,435,864 + CA264_06145 0.32 -0.4 1,435,865 - CA264_06145 0.32 +0.4 1,435,873 + CA264_06145 0.33 -2.9 1,435,874 - CA264_06145 0.33 +0.7 1,435,889 - CA264_06145 0.34 -1.1 1,435,896 + CA264_06145 0.35 -0.5 1,435,925 - CA264_06145 0.37 -0.2 1,435,943 + CA264_06145 0.39 -0.3 1,435,944 - CA264_06145 0.39 -0.3 1,436,080 - CA264_06145 0.51 +0.5 1,436,204 - CA264_06145 0.62 +0.4 1,436,260 - CA264_06145 0.67 -0.1 1,436,352 + CA264_06145 0.76 -0.5 1,436,352 + CA264_06145 0.76 -0.3 1,436,434 + CA264_06145 0.83 -0.2 1,436,539 + -0.6 1,436,540 - +0.6 1,436,564 - -0.4 1,436,612 + +0.0 1,436,613 - +0.3 1,436,617 + -0.3 1,436,617 + +0.1 1,436,618 - -2.5 1,436,653 + -0.5 1,436,653 + -1.0 1,436,709 - +0.3 1,436,718 - CA264_06150 0.11 +0.2 1,436,765 + CA264_06150 0.16 +1.4 1,436,787 + CA264_06150 0.18 +0.8 1,436,866 - CA264_06150 0.26 -0.9 1,436,899 - CA264_06150 0.30 -0.4 1,436,948 + CA264_06150 0.35 -0.2 1,436,948 + CA264_06150 0.35 +0.3 1,436,949 - CA264_06150 0.35 -0.2 1,436,949 - CA264_06150 0.35 +0.9 1,437,110 - CA264_06150 0.52 +2.3 1,437,155 + CA264_06150 0.57 +0.4 1,437,155 + CA264_06150 0.57 -1.6 1,437,155 + CA264_06150 0.57 -0.5 1,437,155 + CA264_06150 0.57 -0.4 1,437,156 - CA264_06150 0.57 +0.8 1,437,160 + CA264_06150 0.58 +1.2 1,437,161 - CA264_06150 0.58 +0.3 1,437,161 - CA264_06150 0.58 -0.2 1,437,209 - CA264_06150 0.63 -0.2 1,437,213 + CA264_06150 0.63 -0.1 1,437,213 + CA264_06150 0.63 -0.6 1,437,213 + CA264_06150 0.63 -0.9 1,437,214 - CA264_06150 0.63 -0.4 1,437,223 - CA264_06150 0.64 -0.5 1,437,223 - CA264_06150 0.64 -0.2 1,437,264 - CA264_06150 0.69 -0.1 1,437,508 + -0.6 1,437,508 + +0.8 1,437,539 + -0.2 1,437,539 + +0.1 1,437,539 + +0.1 1,437,539 + +0.0 1,437,540 - -0.3 1,437,543 + +0.0 1,437,544 - -0.4 1,437,577 + -0.2 1,437,606 + -0.2 1,437,606 + -1.2 1,437,607 - +0.5 1,437,607 - -0.2 1,437,607 - +0.3
Or see this region's nucleotide sequence