Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05450 and CA264_05455 are separated by 159 nucleotides CA264_05455 and CA264_05460 are separated by 66 nucleotides CA264_05460 and CA264_05465 are separated by 532 nucleotides
CA264_05450: CA264_05450 - DNA-binding protein, at 1,264,658 to 1,266,601
_05450
CA264_05455: CA264_05455 - hypothetical protein, at 1,266,761 to 1,267,330
_05455
CA264_05460: CA264_05460 - hypothetical protein, at 1,267,397 to 1,269,655
_05460
CA264_05465: CA264_05465 - thymidylate synthase, at 1,270,188 to 1,270,982
_05465
Position (kb)
1267
1268
1269
1270 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1266.525 kb on + strand at 1266.585 kb on + strand at 1266.586 kb on - strand at 1266.588 kb on - strand at 1266.591 kb on - strand at 1266.603 kb on + strand at 1266.603 kb on + strand at 1266.603 kb on + strand at 1266.604 kb on - strand at 1266.604 kb on - strand at 1266.604 kb on - strand at 1266.649 kb on + strand at 1266.650 kb on - strand at 1266.650 kb on - strand at 1266.650 kb on - strand at 1266.650 kb on - strand at 1266.654 kb on - strand at 1266.666 kb on + strand at 1266.680 kb on + strand at 1266.681 kb on - strand at 1266.681 kb on - strand at 1266.696 kb on - strand at 1266.711 kb on + strand at 1266.868 kb on + strand, within CA264_05455 at 1266.868 kb on + strand, within CA264_05455 at 1266.927 kb on - strand, within CA264_05455 at 1266.927 kb on - strand, within CA264_05455 at 1267.027 kb on + strand, within CA264_05455 at 1267.027 kb on + strand, within CA264_05455 at 1267.203 kb on + strand, within CA264_05455 at 1267.298 kb on + strand at 1267.299 kb on - strand at 1267.299 kb on - strand at 1267.299 kb on - strand at 1267.299 kb on - strand at 1267.316 kb on + strand at 1267.342 kb on + strand at 1267.367 kb on + strand at 1267.368 kb on - strand at 1267.393 kb on + strand at 1267.500 kb on + strand at 1267.500 kb on + strand at 1267.647 kb on - strand, within CA264_05460 at 1267.651 kb on + strand, within CA264_05460 at 1267.706 kb on - strand, within CA264_05460 at 1267.890 kb on + strand, within CA264_05460 at 1268.063 kb on - strand, within CA264_05460 at 1268.116 kb on + strand, within CA264_05460 at 1268.117 kb on - strand, within CA264_05460 at 1268.117 kb on - strand, within CA264_05460 at 1268.151 kb on + strand, within CA264_05460 at 1268.152 kb on - strand, within CA264_05460 at 1268.152 kb on - strand, within CA264_05460 at 1268.195 kb on + strand, within CA264_05460 at 1268.198 kb on + strand, within CA264_05460 at 1268.242 kb on - strand, within CA264_05460 at 1268.248 kb on - strand, within CA264_05460 at 1268.290 kb on - strand, within CA264_05460 at 1268.290 kb on - strand, within CA264_05460 at 1268.290 kb on - strand, within CA264_05460 at 1268.293 kb on + strand, within CA264_05460 at 1268.293 kb on + strand, within CA264_05460 at 1268.294 kb on - strand, within CA264_05460 at 1268.294 kb on - strand, within CA264_05460 at 1268.294 kb on - strand, within CA264_05460 at 1268.294 kb on - strand, within CA264_05460 at 1268.294 kb on - strand, within CA264_05460 at 1268.294 kb on - strand, within CA264_05460 at 1268.294 kb on - strand, within CA264_05460 at 1268.416 kb on + strand, within CA264_05460 at 1268.417 kb on - strand, within CA264_05460 at 1268.421 kb on - strand, within CA264_05460 at 1268.426 kb on + strand, within CA264_05460 at 1268.480 kb on + strand, within CA264_05460 at 1268.480 kb on + strand, within CA264_05460 at 1268.480 kb on + strand, within CA264_05460 at 1268.481 kb on - strand, within CA264_05460 at 1268.481 kb on - strand, within CA264_05460 at 1268.481 kb on - strand, within CA264_05460 at 1268.506 kb on - strand, within CA264_05460 at 1268.506 kb on - strand, within CA264_05460 at 1268.618 kb on + strand, within CA264_05460 at 1268.618 kb on + strand, within CA264_05460 at 1268.619 kb on - strand, within CA264_05460 at 1268.619 kb on - strand, within CA264_05460 at 1268.619 kb on - strand, within CA264_05460 at 1268.621 kb on - strand, within CA264_05460 at 1268.641 kb on + strand, within CA264_05460 at 1268.855 kb on + strand, within CA264_05460 at 1268.856 kb on - strand, within CA264_05460 at 1269.002 kb on - strand, within CA264_05460 at 1269.041 kb on + strand, within CA264_05460 at 1269.041 kb on + strand, within CA264_05460 at 1269.042 kb on - strand, within CA264_05460 at 1269.133 kb on - strand, within CA264_05460 at 1269.197 kb on + strand, within CA264_05460 at 1269.247 kb on + strand, within CA264_05460 at 1269.249 kb on + strand, within CA264_05460 at 1269.249 kb on + strand, within CA264_05460 at 1269.249 kb on + strand, within CA264_05460 at 1269.250 kb on - strand, within CA264_05460 at 1269.250 kb on - strand, within CA264_05460 at 1269.250 kb on - strand, within CA264_05460 at 1269.250 kb on - strand, within CA264_05460 at 1269.288 kb on + strand, within CA264_05460 at 1269.289 kb on - strand, within CA264_05460 at 1269.352 kb on + strand, within CA264_05460 at 1269.472 kb on + strand at 1269.473 kb on - strand at 1269.474 kb on + strand at 1269.505 kb on - strand at 1269.508 kb on + strand at 1269.509 kb on - strand at 1269.562 kb on - strand at 1269.638 kb on + strand at 1269.649 kb on - strand at 1269.688 kb on - strand at 1269.753 kb on - strand at 1269.786 kb on + strand at 1269.786 kb on + strand at 1269.786 kb on + strand at 1269.786 kb on + strand at 1269.787 kb on - strand at 1269.787 kb on - strand at 1269.787 kb on - strand at 1269.788 kb on + strand at 1269.788 kb on + strand at 1269.788 kb on + strand at 1269.788 kb on + strand at 1269.788 kb on + strand at 1269.788 kb on + strand at 1269.788 kb on + strand at 1269.789 kb on - strand at 1269.789 kb on - strand at 1269.789 kb on - strand at 1269.792 kb on + strand at 1269.792 kb on + strand at 1269.792 kb on + strand at 1269.792 kb on + strand at 1269.792 kb on + strand at 1269.792 kb on + strand at 1269.792 kb on + strand at 1269.792 kb on + strand at 1269.792 kb on + strand at 1269.792 kb on + strand at 1269.792 kb on + strand at 1269.792 kb on + strand at 1269.792 kb on + strand at 1269.792 kb on + strand at 1269.792 kb on + strand at 1269.793 kb on - strand at 1269.793 kb on - strand at 1269.793 kb on - strand at 1269.793 kb on - strand at 1269.800 kb on + strand at 1269.800 kb on + strand at 1269.801 kb on - strand at 1269.801 kb on - strand at 1269.848 kb on + strand at 1269.848 kb on + strand at 1269.929 kb on - strand at 1269.930 kb on + strand at 1269.930 kb on + strand at 1269.931 kb on - strand at 1269.931 kb on - strand at 1269.934 kb on + strand at 1269.934 kb on + strand at 1269.934 kb on + strand at 1269.934 kb on + strand at 1269.935 kb on - strand at 1269.935 kb on - strand at 1269.935 kb on - strand at 1269.974 kb on - strand at 1269.983 kb on + strand at 1269.986 kb on - strand at 1270.024 kb on + strand at 1270.106 kb on + strand at 1270.106 kb on + strand at 1270.107 kb on - strand at 1270.107 kb on - strand at 1270.107 kb on - strand at 1270.107 kb on - strand at 1270.108 kb on + strand at 1270.108 kb on + strand at 1270.152 kb on + strand at 1270.152 kb on + strand at 1270.153 kb on - strand at 1270.153 kb on - strand at 1270.171 kb on + strand at 1270.171 kb on + strand at 1270.171 kb on + strand at 1270.172 kb on - strand at 1270.172 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 1,266,525 + -0.2 1,266,585 + +0.9 1,266,586 - -0.9 1,266,588 - -0.3 1,266,591 - +1.3 1,266,603 + -0.4 1,266,603 + +0.6 1,266,603 + +0.7 1,266,604 - +0.4 1,266,604 - -0.2 1,266,604 - +0.2 1,266,649 + -0.1 1,266,650 - -0.4 1,266,650 - -0.1 1,266,650 - -0.0 1,266,650 - -0.3 1,266,654 - -0.6 1,266,666 + +0.1 1,266,680 + +1.8 1,266,681 - -0.1 1,266,681 - +0.0 1,266,696 - -0.5 1,266,711 + -0.4 1,266,868 + CA264_05455 0.19 -1.8 1,266,868 + CA264_05455 0.19 -1.7 1,266,927 - CA264_05455 0.29 -0.2 1,266,927 - CA264_05455 0.29 -2.5 1,267,027 + CA264_05455 0.47 -0.9 1,267,027 + CA264_05455 0.47 -3.0 1,267,203 + CA264_05455 0.78 -1.1 1,267,298 + -0.7 1,267,299 - -0.7 1,267,299 - -0.6 1,267,299 - -2.0 1,267,299 - -1.1 1,267,316 + -0.7 1,267,342 + +0.3 1,267,367 + +0.1 1,267,368 - -0.8 1,267,393 + +0.1 1,267,500 + -0.6 1,267,500 + +0.9 1,267,647 - CA264_05460 0.11 -0.7 1,267,651 + CA264_05460 0.11 -0.2 1,267,706 - CA264_05460 0.14 -0.7 1,267,890 + CA264_05460 0.22 +0.2 1,268,063 - CA264_05460 0.29 -0.5 1,268,116 + CA264_05460 0.32 -1.1 1,268,117 - CA264_05460 0.32 -0.3 1,268,117 - CA264_05460 0.32 -0.1 1,268,151 + CA264_05460 0.33 +0.2 1,268,152 - CA264_05460 0.33 +0.1 1,268,152 - CA264_05460 0.33 -0.1 1,268,195 + CA264_05460 0.35 +1.4 1,268,198 + CA264_05460 0.35 -0.6 1,268,242 - CA264_05460 0.37 +0.4 1,268,248 - CA264_05460 0.38 +0.1 1,268,290 - CA264_05460 0.40 -0.4 1,268,290 - CA264_05460 0.40 -0.8 1,268,290 - CA264_05460 0.40 -0.7 1,268,293 + CA264_05460 0.40 -1.7 1,268,293 + CA264_05460 0.40 -0.4 1,268,294 - CA264_05460 0.40 -1.4 1,268,294 - CA264_05460 0.40 -0.1 1,268,294 - CA264_05460 0.40 +0.3 1,268,294 - CA264_05460 0.40 -0.5 1,268,294 - CA264_05460 0.40 -0.6 1,268,294 - CA264_05460 0.40 +0.3 1,268,294 - CA264_05460 0.40 -0.2 1,268,416 + CA264_05460 0.45 -0.9 1,268,417 - CA264_05460 0.45 -0.7 1,268,421 - CA264_05460 0.45 -1.3 1,268,426 + CA264_05460 0.46 +0.1 1,268,480 + CA264_05460 0.48 +0.8 1,268,480 + CA264_05460 0.48 -0.3 1,268,480 + CA264_05460 0.48 -0.3 1,268,481 - CA264_05460 0.48 -0.1 1,268,481 - CA264_05460 0.48 -0.2 1,268,481 - CA264_05460 0.48 -0.5 1,268,506 - CA264_05460 0.49 +0.2 1,268,506 - CA264_05460 0.49 -0.4 1,268,618 + CA264_05460 0.54 +1.3 1,268,618 + CA264_05460 0.54 -0.3 1,268,619 - CA264_05460 0.54 -0.2 1,268,619 - CA264_05460 0.54 +0.2 1,268,619 - CA264_05460 0.54 +0.0 1,268,621 - CA264_05460 0.54 -0.6 1,268,641 + CA264_05460 0.55 -0.2 1,268,855 + CA264_05460 0.65 +0.3 1,268,856 - CA264_05460 0.65 -0.3 1,269,002 - CA264_05460 0.71 +0.1 1,269,041 + CA264_05460 0.73 +1.3 1,269,041 + CA264_05460 0.73 -0.2 1,269,042 - CA264_05460 0.73 -0.9 1,269,133 - CA264_05460 0.77 -0.0 1,269,197 + CA264_05460 0.80 -0.4 1,269,247 + CA264_05460 0.82 -0.3 1,269,249 + CA264_05460 0.82 -0.2 1,269,249 + CA264_05460 0.82 -0.0 1,269,249 + CA264_05460 0.82 -0.8 1,269,250 - CA264_05460 0.82 +0.3 1,269,250 - CA264_05460 0.82 +1.0 1,269,250 - CA264_05460 0.82 -0.1 1,269,250 - CA264_05460 0.82 -0.1 1,269,288 + CA264_05460 0.84 +0.0 1,269,289 - CA264_05460 0.84 +0.2 1,269,352 + CA264_05460 0.87 -1.6 1,269,472 + -0.1 1,269,473 - -0.2 1,269,474 + -1.0 1,269,505 - -0.2 1,269,508 + -0.1 1,269,509 - +0.9 1,269,562 - -0.3 1,269,638 + +0.2 1,269,649 - -0.7 1,269,688 - +1.0 1,269,753 - +0.3 1,269,786 + +0.2 1,269,786 + -0.1 1,269,786 + -0.1 1,269,786 + -0.1 1,269,787 - +0.1 1,269,787 - +0.2 1,269,787 - +0.6 1,269,788 + +0.0 1,269,788 + -0.4 1,269,788 + -0.7 1,269,788 + +0.6 1,269,788 + -1.1 1,269,788 + +1.0 1,269,788 + +0.1 1,269,789 - -0.4 1,269,789 - -1.1 1,269,789 - +0.1 1,269,792 + -0.4 1,269,792 + -0.4 1,269,792 + -0.0 1,269,792 + -0.4 1,269,792 + +0.8 1,269,792 + -0.5 1,269,792 + -0.9 1,269,792 + -0.2 1,269,792 + +0.3 1,269,792 + -0.3 1,269,792 + -0.3 1,269,792 + +0.2 1,269,792 + -0.7 1,269,792 + -0.4 1,269,792 + -1.1 1,269,793 - -0.5 1,269,793 - -0.5 1,269,793 - +0.4 1,269,793 - +0.3 1,269,800 + +0.1 1,269,800 + -2.4 1,269,801 - +0.5 1,269,801 - -0.1 1,269,848 + -1.4 1,269,848 + +0.0 1,269,929 - -0.3 1,269,930 + -0.3 1,269,930 + -0.5 1,269,931 - -0.1 1,269,931 - -0.1 1,269,934 + -0.6 1,269,934 + -0.2 1,269,934 + -0.1 1,269,934 + +0.6 1,269,935 - +0.2 1,269,935 - -0.2 1,269,935 - -0.3 1,269,974 - -0.3 1,269,983 + -1.9 1,269,986 - +0.0 1,270,024 + -0.4 1,270,106 + -0.2 1,270,106 + -0.3 1,270,107 - +0.3 1,270,107 - +0.1 1,270,107 - -0.4 1,270,107 - -1.0 1,270,108 + +0.3 1,270,108 + -0.7 1,270,152 + -0.2 1,270,152 + -0.2 1,270,153 - +0.6 1,270,153 - +0.7 1,270,171 + -0.0 1,270,171 + +0.4 1,270,171 + -0.8 1,270,172 - +0.0 1,270,172 - -0.4
Or see this region's nucleotide sequence