Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05440 and CA264_05445 are separated by 319 nucleotides CA264_05445 and CA264_05450 are separated by 81 nucleotides CA264_05450 and CA264_05455 are separated by 159 nucleotides CA264_05455 and CA264_05460 are separated by 66 nucleotides
CA264_05440: CA264_05440 - glucose-fructose oxidoreductase, at 1,262,575 to 1,263,744
_05440
CA264_05445: CA264_05445 - peptidylprolyl isomerase, at 1,264,064 to 1,264,576
_05445
CA264_05450: CA264_05450 - DNA-binding protein, at 1,264,658 to 1,266,601
_05450
CA264_05455: CA264_05455 - hypothetical protein, at 1,266,761 to 1,267,330
_05455
CA264_05460: CA264_05460 - hypothetical protein, at 1,267,397 to 1,269,655
_05460
Position (kb)
1264
1265
1266
1267 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1263.735 kb on - strand at 1263.735 kb on - strand at 1263.752 kb on + strand at 1263.755 kb on - strand at 1263.812 kb on - strand at 1263.923 kb on + strand at 1263.923 kb on + strand at 1263.924 kb on - strand at 1263.934 kb on + strand at 1263.972 kb on - strand at 1264.000 kb on + strand at 1264.042 kb on + strand at 1264.058 kb on + strand at 1264.065 kb on + strand at 1264.155 kb on + strand, within CA264_05445 at 1264.157 kb on + strand, within CA264_05445 at 1264.220 kb on + strand, within CA264_05445 at 1264.259 kb on - strand, within CA264_05445 at 1264.266 kb on + strand, within CA264_05445 at 1264.266 kb on + strand, within CA264_05445 at 1264.266 kb on + strand, within CA264_05445 at 1264.267 kb on - strand, within CA264_05445 at 1264.458 kb on + strand, within CA264_05445 at 1264.462 kb on + strand, within CA264_05445 at 1264.462 kb on + strand, within CA264_05445 at 1264.462 kb on + strand, within CA264_05445 at 1264.549 kb on + strand at 1264.550 kb on - strand at 1264.550 kb on - strand at 1264.553 kb on + strand at 1264.659 kb on + strand at 1264.703 kb on + strand at 1264.704 kb on - strand at 1264.705 kb on + strand at 1264.705 kb on + strand at 1264.706 kb on - strand at 1264.713 kb on - strand at 1264.735 kb on - strand at 1264.756 kb on + strand at 1264.821 kb on - strand at 1264.873 kb on + strand, within CA264_05450 at 1264.875 kb on + strand, within CA264_05450 at 1264.876 kb on - strand, within CA264_05450 at 1264.879 kb on + strand, within CA264_05450 at 1264.879 kb on + strand, within CA264_05450 at 1264.880 kb on - strand, within CA264_05450 at 1264.882 kb on + strand, within CA264_05450 at 1264.971 kb on - strand, within CA264_05450 at 1265.526 kb on + strand, within CA264_05450 at 1265.575 kb on + strand, within CA264_05450 at 1265.609 kb on - strand, within CA264_05450 at 1265.662 kb on + strand, within CA264_05450 at 1265.768 kb on - strand, within CA264_05450 at 1265.770 kb on - strand, within CA264_05450 at 1265.770 kb on - strand, within CA264_05450 at 1266.094 kb on + strand, within CA264_05450 at 1266.152 kb on - strand, within CA264_05450 at 1266.305 kb on + strand, within CA264_05450 at 1266.305 kb on + strand, within CA264_05450 at 1266.305 kb on + strand, within CA264_05450 at 1266.305 kb on + strand, within CA264_05450 at 1266.525 kb on + strand at 1266.585 kb on + strand at 1266.586 kb on - strand at 1266.588 kb on - strand at 1266.591 kb on - strand at 1266.603 kb on + strand at 1266.603 kb on + strand at 1266.603 kb on + strand at 1266.604 kb on - strand at 1266.604 kb on - strand at 1266.604 kb on - strand at 1266.649 kb on + strand at 1266.650 kb on - strand at 1266.650 kb on - strand at 1266.650 kb on - strand at 1266.650 kb on - strand at 1266.654 kb on - strand at 1266.666 kb on + strand at 1266.680 kb on + strand at 1266.681 kb on - strand at 1266.681 kb on - strand at 1266.696 kb on - strand at 1266.711 kb on + strand at 1266.868 kb on + strand, within CA264_05455 at 1266.868 kb on + strand, within CA264_05455 at 1266.927 kb on - strand, within CA264_05455 at 1266.927 kb on - strand, within CA264_05455 at 1267.027 kb on + strand, within CA264_05455 at 1267.027 kb on + strand, within CA264_05455 at 1267.203 kb on + strand, within CA264_05455 at 1267.298 kb on + strand at 1267.299 kb on - strand at 1267.299 kb on - strand at 1267.299 kb on - strand at 1267.299 kb on - strand at 1267.316 kb on + strand at 1267.342 kb on + strand at 1267.367 kb on + strand at 1267.368 kb on - strand at 1267.393 kb on + strand at 1267.500 kb on + strand at 1267.500 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 1,263,735 - +2.3 1,263,735 - +0.1 1,263,752 + +0.3 1,263,755 - +0.5 1,263,812 - -0.0 1,263,923 + +0.5 1,263,923 + -0.0 1,263,924 - -0.0 1,263,934 + -0.6 1,263,972 - -0.2 1,264,000 + +1.1 1,264,042 + +0.3 1,264,058 + +0.8 1,264,065 + -0.7 1,264,155 + CA264_05445 0.18 -0.3 1,264,157 + CA264_05445 0.18 -1.2 1,264,220 + CA264_05445 0.30 +0.5 1,264,259 - CA264_05445 0.38 -0.3 1,264,266 + CA264_05445 0.39 -0.2 1,264,266 + CA264_05445 0.39 +0.6 1,264,266 + CA264_05445 0.39 +0.3 1,264,267 - CA264_05445 0.40 -1.9 1,264,458 + CA264_05445 0.77 +0.0 1,264,462 + CA264_05445 0.78 -0.1 1,264,462 + CA264_05445 0.78 -0.1 1,264,462 + CA264_05445 0.78 +0.3 1,264,549 + -0.6 1,264,550 - -1.7 1,264,550 - -0.2 1,264,553 + +0.3 1,264,659 + +0.3 1,264,703 + +0.6 1,264,704 - +0.7 1,264,705 + +0.2 1,264,705 + -0.5 1,264,706 - -0.3 1,264,713 - -1.0 1,264,735 - +0.5 1,264,756 + -0.1 1,264,821 - -0.3 1,264,873 + CA264_05450 0.11 -0.5 1,264,875 + CA264_05450 0.11 +0.6 1,264,876 - CA264_05450 0.11 -0.3 1,264,879 + CA264_05450 0.11 +0.8 1,264,879 + CA264_05450 0.11 +0.7 1,264,880 - CA264_05450 0.11 -0.1 1,264,882 + CA264_05450 0.12 +0.8 1,264,971 - CA264_05450 0.16 -0.4 1,265,526 + CA264_05450 0.45 -0.2 1,265,575 + CA264_05450 0.47 +0.4 1,265,609 - CA264_05450 0.49 -0.6 1,265,662 + CA264_05450 0.52 -0.3 1,265,768 - CA264_05450 0.57 +0.5 1,265,770 - CA264_05450 0.57 -1.7 1,265,770 - CA264_05450 0.57 -0.4 1,266,094 + CA264_05450 0.74 +0.4 1,266,152 - CA264_05450 0.77 -0.2 1,266,305 + CA264_05450 0.85 +2.4 1,266,305 + CA264_05450 0.85 -0.9 1,266,305 + CA264_05450 0.85 -0.3 1,266,305 + CA264_05450 0.85 -0.3 1,266,525 + -0.2 1,266,585 + +0.9 1,266,586 - -0.9 1,266,588 - -0.3 1,266,591 - +1.3 1,266,603 + -0.4 1,266,603 + +0.6 1,266,603 + +0.7 1,266,604 - +0.4 1,266,604 - -0.2 1,266,604 - +0.2 1,266,649 + -0.1 1,266,650 - -0.4 1,266,650 - -0.1 1,266,650 - -0.0 1,266,650 - -0.3 1,266,654 - -0.6 1,266,666 + +0.1 1,266,680 + +1.8 1,266,681 - -0.1 1,266,681 - +0.0 1,266,696 - -0.5 1,266,711 + -0.4 1,266,868 + CA264_05455 0.19 -1.8 1,266,868 + CA264_05455 0.19 -1.7 1,266,927 - CA264_05455 0.29 -0.2 1,266,927 - CA264_05455 0.29 -2.5 1,267,027 + CA264_05455 0.47 -0.9 1,267,027 + CA264_05455 0.47 -3.0 1,267,203 + CA264_05455 0.78 -1.1 1,267,298 + -0.7 1,267,299 - -0.7 1,267,299 - -0.6 1,267,299 - -2.0 1,267,299 - -1.1 1,267,316 + -0.7 1,267,342 + +0.3 1,267,367 + +0.1 1,267,368 - -0.8 1,267,393 + +0.1 1,267,500 + -0.6 1,267,500 + +0.9
Or see this region's nucleotide sequence