Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04320 and CA264_04325 are separated by 98 nucleotides CA264_04325 and CA264_04330 are separated by 12 nucleotides CA264_04330 and CA264_04335 are separated by 91 nucleotides
CA264_04320: CA264_04320 - MFS transporter, at 998,959 to 1,000,287
_04320
CA264_04325: CA264_04325 - amidohydrolase, at 1,000,386 to 1,002,047
_04325
CA264_04330: CA264_04330 - AMP nucleosidase, at 1,002,060 to 1,002,833
_04330
CA264_04335: CA264_04335 - restriction endonuclease subunit R, at 1,002,925 to 1,003,371
_04335
Position (kb)
1000
1001
1002
1003 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 999.404 kb on - strand, within CA264_04320 at 999.440 kb on - strand, within CA264_04320 at 999.454 kb on - strand, within CA264_04320 at 999.519 kb on + strand, within CA264_04320 at 999.592 kb on + strand, within CA264_04320 at 999.613 kb on + strand, within CA264_04320 at 999.622 kb on - strand, within CA264_04320 at 999.664 kb on - strand, within CA264_04320 at 999.664 kb on - strand, within CA264_04320 at 999.683 kb on + strand, within CA264_04320 at 999.758 kb on - strand, within CA264_04320 at 999.758 kb on - strand, within CA264_04320 at 999.770 kb on + strand, within CA264_04320 at 999.856 kb on + strand, within CA264_04320 at 999.883 kb on + strand, within CA264_04320 at 999.893 kb on + strand, within CA264_04320 at 999.893 kb on + strand, within CA264_04320 at 999.904 kb on - strand, within CA264_04320 at 999.946 kb on + strand, within CA264_04320 at 1000.014 kb on - strand, within CA264_04320 at 1000.014 kb on - strand, within CA264_04320 at 1000.036 kb on + strand, within CA264_04320 at 1000.037 kb on - strand, within CA264_04320 at 1000.056 kb on + strand, within CA264_04320 at 1000.078 kb on + strand, within CA264_04320 at 1000.079 kb on - strand, within CA264_04320 at 1000.084 kb on - strand, within CA264_04320 at 1000.084 kb on - strand, within CA264_04320 at 1000.090 kb on + strand, within CA264_04320 at 1000.090 kb on + strand, within CA264_04320 at 1000.091 kb on - strand, within CA264_04320 at 1000.091 kb on - strand, within CA264_04320 at 1000.091 kb on - strand, within CA264_04320 at 1000.135 kb on + strand, within CA264_04320 at 1000.136 kb on - strand, within CA264_04320 at 1000.156 kb on - strand at 1000.276 kb on - strand at 1000.296 kb on + strand at 1000.297 kb on - strand at 1000.297 kb on - strand at 1000.306 kb on - strand at 1000.306 kb on - strand at 1000.413 kb on + strand at 1000.459 kb on - strand at 1000.464 kb on + strand at 1000.486 kb on - strand at 1000.487 kb on + strand at 1000.514 kb on + strand at 1000.715 kb on - strand, within CA264_04325 at 1000.792 kb on + strand, within CA264_04325 at 1000.793 kb on - strand, within CA264_04325 at 1000.796 kb on + strand, within CA264_04325 at 1000.797 kb on - strand, within CA264_04325 at 1000.841 kb on - strand, within CA264_04325 at 1000.937 kb on + strand, within CA264_04325 at 1000.938 kb on - strand, within CA264_04325 at 1001.125 kb on + strand, within CA264_04325 at 1001.125 kb on + strand, within CA264_04325 at 1001.182 kb on + strand, within CA264_04325 at 1001.271 kb on + strand, within CA264_04325 at 1001.276 kb on + strand, within CA264_04325 at 1001.283 kb on - strand, within CA264_04325 at 1001.309 kb on + strand, within CA264_04325 at 1001.310 kb on - strand, within CA264_04325 at 1001.310 kb on - strand, within CA264_04325 at 1001.547 kb on + strand, within CA264_04325 at 1001.548 kb on - strand, within CA264_04325 at 1001.548 kb on - strand, within CA264_04325 at 1001.548 kb on - strand, within CA264_04325 at 1001.548 kb on - strand, within CA264_04325 at 1001.652 kb on - strand, within CA264_04325 at 1001.691 kb on + strand, within CA264_04325 at 1001.692 kb on - strand, within CA264_04325 at 1001.753 kb on - strand, within CA264_04325 at 1001.826 kb on - strand, within CA264_04325 at 1001.827 kb on + strand, within CA264_04325 at 1001.827 kb on + strand, within CA264_04325 at 1001.827 kb on + strand, within CA264_04325 at 1001.866 kb on - strand, within CA264_04325 at 1001.910 kb on - strand at 1001.938 kb on + strand at 1002.033 kb on - strand at 1002.148 kb on + strand, within CA264_04330 at 1002.365 kb on - strand, within CA264_04330 at 1002.699 kb on + strand, within CA264_04330 at 1002.731 kb on - strand, within CA264_04330 at 1002.843 kb on - strand at 1002.998 kb on + strand, within CA264_04335
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 999,404 - CA264_04320 0.33 +1.3 999,440 - CA264_04320 0.36 +0.2 999,454 - CA264_04320 0.37 +2.0 999,519 + CA264_04320 0.42 +0.0 999,592 + CA264_04320 0.48 -0.4 999,613 + CA264_04320 0.49 +0.4 999,622 - CA264_04320 0.50 +0.3 999,664 - CA264_04320 0.53 -0.1 999,664 - CA264_04320 0.53 +0.6 999,683 + CA264_04320 0.54 -0.5 999,758 - CA264_04320 0.60 -0.6 999,758 - CA264_04320 0.60 -0.4 999,770 + CA264_04320 0.61 -0.3 999,856 + CA264_04320 0.67 -0.9 999,883 + CA264_04320 0.70 +0.1 999,893 + CA264_04320 0.70 -0.0 999,893 + CA264_04320 0.70 -0.3 999,904 - CA264_04320 0.71 -0.2 999,946 + CA264_04320 0.74 -1.0 1,000,014 - CA264_04320 0.79 +1.2 1,000,014 - CA264_04320 0.79 +0.8 1,000,036 + CA264_04320 0.81 +1.4 1,000,037 - CA264_04320 0.81 +0.6 1,000,056 + CA264_04320 0.83 -0.8 1,000,078 + CA264_04320 0.84 -0.6 1,000,079 - CA264_04320 0.84 +0.4 1,000,084 - CA264_04320 0.85 +0.3 1,000,084 - CA264_04320 0.85 +1.7 1,000,090 + CA264_04320 0.85 -1.5 1,000,090 + CA264_04320 0.85 +0.1 1,000,091 - CA264_04320 0.85 -0.4 1,000,091 - CA264_04320 0.85 +0.3 1,000,091 - CA264_04320 0.85 +1.2 1,000,135 + CA264_04320 0.88 -1.5 1,000,136 - CA264_04320 0.89 -1.0 1,000,156 - +0.3 1,000,276 - +0.1 1,000,296 + +0.5 1,000,297 - +0.3 1,000,297 - -1.3 1,000,306 - +1.2 1,000,306 - -0.1 1,000,413 + -0.2 1,000,459 - -0.6 1,000,464 + +0.2 1,000,486 - -0.2 1,000,487 + -0.2 1,000,514 + -0.2 1,000,715 - CA264_04325 0.20 +1.4 1,000,792 + CA264_04325 0.24 +0.1 1,000,793 - CA264_04325 0.24 +0.1 1,000,796 + CA264_04325 0.25 -0.8 1,000,797 - CA264_04325 0.25 -2.2 1,000,841 - CA264_04325 0.27 +0.0 1,000,937 + CA264_04325 0.33 -0.1 1,000,938 - CA264_04325 0.33 -0.1 1,001,125 + CA264_04325 0.44 +0.1 1,001,125 + CA264_04325 0.44 -0.1 1,001,182 + CA264_04325 0.48 +1.8 1,001,271 + CA264_04325 0.53 -0.1 1,001,276 + CA264_04325 0.54 -0.4 1,001,283 - CA264_04325 0.54 +0.4 1,001,309 + CA264_04325 0.56 +0.4 1,001,310 - CA264_04325 0.56 -1.4 1,001,310 - CA264_04325 0.56 -0.6 1,001,547 + CA264_04325 0.70 -0.5 1,001,548 - CA264_04325 0.70 -0.3 1,001,548 - CA264_04325 0.70 +0.0 1,001,548 - CA264_04325 0.70 -0.6 1,001,548 - CA264_04325 0.70 +0.4 1,001,652 - CA264_04325 0.76 +0.0 1,001,691 + CA264_04325 0.79 +1.3 1,001,692 - CA264_04325 0.79 -0.7 1,001,753 - CA264_04325 0.82 -0.5 1,001,826 - CA264_04325 0.87 -0.4 1,001,827 + CA264_04325 0.87 -0.6 1,001,827 + CA264_04325 0.87 -1.5 1,001,827 + CA264_04325 0.87 -0.4 1,001,866 - CA264_04325 0.89 -0.7 1,001,910 - +1.3 1,001,938 + -1.1 1,002,033 - -0.9 1,002,148 + CA264_04330 0.11 -2.4 1,002,365 - CA264_04330 0.39 -3.1 1,002,699 + CA264_04330 0.83 -1.8 1,002,731 - CA264_04330 0.87 -3.8 1,002,843 - -0.6 1,002,998 + CA264_04335 0.16 -0.1
Or see this region's nucleotide sequence