Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03435 and CA264_03440 are separated by 246 nucleotides CA264_03440 and CA264_03445 are separated by 341 nucleotides CA264_03445 and CA264_03450 are separated by 49 nucleotides
CA264_03435: CA264_03435 - hypothetical protein, at 800,647 to 801,348
_03435
CA264_03440: CA264_03440 - DoxX family protein, at 801,595 to 801,993
_03440
CA264_03445: CA264_03445 - anhydro-N-acetylmuramic acid kinase, at 802,335 to 803,534
_03445
CA264_03450: CA264_03450 - SusC/RagA family TonB-linked outer membrane protein, at 803,584 to 806,595
_03450
Position (kb) 802
803
804 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 801.401 kb on + strand at 801.427 kb on + strand at 801.428 kb on - strand at 801.428 kb on - strand at 801.428 kb on - strand at 801.429 kb on + strand at 801.430 kb on - strand at 801.430 kb on - strand at 801.430 kb on - strand at 801.475 kb on - strand at 801.489 kb on + strand at 801.489 kb on + strand at 801.490 kb on - strand at 801.490 kb on - strand at 801.490 kb on - strand at 801.490 kb on - strand at 801.498 kb on - strand at 801.547 kb on + strand at 801.549 kb on + strand at 801.553 kb on + strand at 801.554 kb on - strand at 801.554 kb on - strand at 801.567 kb on + strand at 801.604 kb on + strand at 801.604 kb on + strand at 801.604 kb on + strand at 801.604 kb on + strand at 801.666 kb on + strand, within CA264_03440 at 801.667 kb on - strand, within CA264_03440 at 801.775 kb on - strand, within CA264_03440 at 801.907 kb on + strand, within CA264_03440 at 801.908 kb on - strand, within CA264_03440 at 801.925 kb on + strand, within CA264_03440 at 801.926 kb on - strand, within CA264_03440 at 801.926 kb on - strand, within CA264_03440 at 801.984 kb on + strand at 802.004 kb on + strand at 802.010 kb on + strand at 802.011 kb on - strand at 802.011 kb on - strand at 802.011 kb on - strand at 802.013 kb on + strand at 802.014 kb on - strand at 802.074 kb on - strand at 802.077 kb on + strand at 802.077 kb on + strand at 802.077 kb on + strand at 802.077 kb on + strand at 802.077 kb on + strand at 802.078 kb on - strand at 802.078 kb on - strand at 802.078 kb on - strand at 802.110 kb on + strand at 802.111 kb on - strand at 802.111 kb on - strand at 802.117 kb on - strand at 802.117 kb on - strand at 802.217 kb on - strand at 802.229 kb on + strand at 802.230 kb on - strand at 802.231 kb on + strand at 802.231 kb on + strand at 802.231 kb on + strand at 802.232 kb on - strand at 802.238 kb on + strand at 802.238 kb on + strand at 802.324 kb on + strand at 802.324 kb on + strand at 802.325 kb on - strand at 802.334 kb on + strand at 802.335 kb on - strand at 802.388 kb on + strand at 802.433 kb on - strand at 802.433 kb on - strand at 802.536 kb on - strand, within CA264_03445 at 802.587 kb on + strand, within CA264_03445 at 802.588 kb on - strand, within CA264_03445 at 802.588 kb on - strand, within CA264_03445 at 802.689 kb on + strand, within CA264_03445 at 802.690 kb on - strand, within CA264_03445 at 802.690 kb on - strand, within CA264_03445 at 802.690 kb on - strand at 802.712 kb on + strand, within CA264_03445 at 802.712 kb on + strand, within CA264_03445 at 802.713 kb on - strand, within CA264_03445 at 802.717 kb on + strand, within CA264_03445 at 802.717 kb on + strand, within CA264_03445 at 802.717 kb on + strand, within CA264_03445 at 802.742 kb on - strand, within CA264_03445 at 802.742 kb on - strand, within CA264_03445 at 802.747 kb on + strand, within CA264_03445 at 802.747 kb on + strand, within CA264_03445 at 802.748 kb on - strand, within CA264_03445 at 802.787 kb on - strand, within CA264_03445 at 802.787 kb on - strand, within CA264_03445 at 802.787 kb on - strand, within CA264_03445 at 802.861 kb on - strand, within CA264_03445 at 802.901 kb on + strand, within CA264_03445 at 802.901 kb on + strand, within CA264_03445 at 802.950 kb on - strand, within CA264_03445 at 802.993 kb on + strand, within CA264_03445 at 803.004 kb on + strand, within CA264_03445 at 803.005 kb on - strand, within CA264_03445 at 803.006 kb on + strand, within CA264_03445 at 803.053 kb on + strand, within CA264_03445 at 803.098 kb on + strand, within CA264_03445 at 803.099 kb on - strand, within CA264_03445 at 803.099 kb on - strand, within CA264_03445 at 803.099 kb on - strand, within CA264_03445 at 803.231 kb on - strand, within CA264_03445 at 803.398 kb on + strand, within CA264_03445 at 803.553 kb on - strand at 803.563 kb on + strand at 803.575 kb on + strand at 803.575 kb on + strand at 803.584 kb on - strand at 803.584 kb on - strand at 803.597 kb on - strand at 803.601 kb on + strand at 803.657 kb on + strand at 803.657 kb on + strand at 803.770 kb on - strand at 803.770 kb on - strand at 803.770 kb on - strand at 803.833 kb on + strand at 803.833 kb on + strand at 803.833 kb on + strand at 803.836 kb on - strand at 803.851 kb on + strand at 803.852 kb on - strand at 803.852 kb on - strand at 803.862 kb on + strand at 803.901 kb on + strand, within CA264_03450 at 803.902 kb on - strand, within CA264_03450 at 803.902 kb on - strand, within CA264_03450 at 803.945 kb on + strand, within CA264_03450 at 804.006 kb on + strand, within CA264_03450 at 804.006 kb on + strand, within CA264_03450 at 804.006 kb on + strand, within CA264_03450 at 804.007 kb on - strand, within CA264_03450 at 804.007 kb on - strand, within CA264_03450 at 804.007 kb on - strand, within CA264_03450 at 804.007 kb on - strand, within CA264_03450 at 804.081 kb on - strand, within CA264_03450 at 804.126 kb on + strand, within CA264_03450 at 804.127 kb on - strand, within CA264_03450 at 804.148 kb on - strand, within CA264_03450 at 804.153 kb on + strand, within CA264_03450 at 804.154 kb on - strand, within CA264_03450 at 804.154 kb on - strand, within CA264_03450 at 804.154 kb on - strand, within CA264_03450 at 804.154 kb on - strand, within CA264_03450 at 804.181 kb on + strand, within CA264_03450 at 804.182 kb on - strand, within CA264_03450 at 804.182 kb on - strand, within CA264_03450 at 804.182 kb on - strand, within CA264_03450 at 804.182 kb on - strand, within CA264_03450 at 804.241 kb on + strand, within CA264_03450 at 804.261 kb on - strand, within CA264_03450 at 804.261 kb on - strand, within CA264_03450 at 804.264 kb on + strand, within CA264_03450 at 804.265 kb on - strand, within CA264_03450 at 804.281 kb on + strand, within CA264_03450 at 804.281 kb on + strand, within CA264_03450 at 804.282 kb on - strand, within CA264_03450 at 804.282 kb on - strand, within CA264_03450 at 804.282 kb on - strand, within CA264_03450 at 804.289 kb on - strand, within CA264_03450 at 804.322 kb on - strand, within CA264_03450 at 804.325 kb on + strand, within CA264_03450 at 804.325 kb on + strand, within CA264_03450 at 804.325 kb on + strand, within CA264_03450 at 804.325 kb on + strand, within CA264_03450 at 804.325 kb on + strand, within CA264_03450 at 804.326 kb on - strand, within CA264_03450 at 804.385 kb on - strand, within CA264_03450 at 804.406 kb on - strand, within CA264_03450
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 801,401 + +0.2 801,427 + -1.0 801,428 - +0.2 801,428 - -0.8 801,428 - -0.3 801,429 + +1.7 801,430 - +0.5 801,430 - -1.3 801,430 - -0.0 801,475 - -0.4 801,489 + -0.3 801,489 + -0.3 801,490 - -1.4 801,490 - -0.2 801,490 - +0.3 801,490 - -0.6 801,498 - -0.6 801,547 + -1.0 801,549 + -0.6 801,553 + +0.4 801,554 - +0.3 801,554 - -0.1 801,567 + -1.4 801,604 + +0.5 801,604 + +0.1 801,604 + +0.9 801,604 + +0.3 801,666 + CA264_03440 0.18 -0.6 801,667 - CA264_03440 0.18 -0.3 801,775 - CA264_03440 0.45 +0.3 801,907 + CA264_03440 0.78 -0.0 801,908 - CA264_03440 0.78 +0.1 801,925 + CA264_03440 0.83 +0.2 801,926 - CA264_03440 0.83 +0.5 801,926 - CA264_03440 0.83 -0.4 801,984 + +0.2 802,004 + -0.9 802,010 + +0.2 802,011 - +0.8 802,011 - -0.4 802,011 - -0.4 802,013 + +0.4 802,014 - -0.0 802,074 - +1.5 802,077 + +0.4 802,077 + +0.4 802,077 + -1.0 802,077 + +1.0 802,077 + -0.0 802,078 - -0.6 802,078 - -0.3 802,078 - +0.3 802,110 + -0.2 802,111 - -0.6 802,111 - -0.2 802,117 - +0.7 802,117 - -0.1 802,217 - +0.8 802,229 + +0.6 802,230 - -0.4 802,231 + +0.2 802,231 + +0.7 802,231 + -0.3 802,232 - -0.0 802,238 + +0.7 802,238 + +0.1 802,324 + +0.5 802,324 + -0.0 802,325 - +0.1 802,334 + +2.2 802,335 - -0.8 802,388 + +0.4 802,433 - -2.1 802,433 - +0.6 802,536 - CA264_03445 0.17 +0.1 802,587 + CA264_03445 0.21 -0.2 802,588 - CA264_03445 0.21 -0.1 802,588 - CA264_03445 0.21 -0.5 802,689 + CA264_03445 0.29 +0.3 802,690 - CA264_03445 0.30 +0.7 802,690 - CA264_03445 0.30 +0.4 802,690 - +0.8 802,712 + CA264_03445 0.31 -0.6 802,712 + CA264_03445 0.31 +0.3 802,713 - CA264_03445 0.32 +1.4 802,717 + CA264_03445 0.32 +0.7 802,717 + CA264_03445 0.32 -0.2 802,717 + CA264_03445 0.32 +0.2 802,742 - CA264_03445 0.34 +1.2 802,742 - CA264_03445 0.34 -0.0 802,747 + CA264_03445 0.34 +0.5 802,747 + CA264_03445 0.34 -0.2 802,748 - CA264_03445 0.34 -0.3 802,787 - CA264_03445 0.38 +0.3 802,787 - CA264_03445 0.38 -0.7 802,787 - CA264_03445 0.38 +0.5 802,861 - CA264_03445 0.44 +0.5 802,901 + CA264_03445 0.47 +0.1 802,901 + CA264_03445 0.47 +1.2 802,950 - CA264_03445 0.51 -0.3 802,993 + CA264_03445 0.55 +0.1 803,004 + CA264_03445 0.56 +0.9 803,005 - CA264_03445 0.56 -0.3 803,006 + CA264_03445 0.56 -0.3 803,053 + CA264_03445 0.60 +1.9 803,098 + CA264_03445 0.64 +0.0 803,099 - CA264_03445 0.64 +0.7 803,099 - CA264_03445 0.64 +0.9 803,099 - CA264_03445 0.64 +0.9 803,231 - CA264_03445 0.75 +0.5 803,398 + CA264_03445 0.89 +0.5 803,553 - +0.1 803,563 + -0.3 803,575 + -0.2 803,575 + -0.3 803,584 - -1.1 803,584 - +1.4 803,597 - +1.3 803,601 + -1.8 803,657 + +0.7 803,657 + -0.3 803,770 - -0.1 803,770 - +0.4 803,770 - +0.1 803,833 + +0.6 803,833 + -0.4 803,833 + -0.5 803,836 - -1.8 803,851 + -1.1 803,852 - +0.1 803,852 - -0.5 803,862 + -0.0 803,901 + CA264_03450 0.11 +0.3 803,902 - CA264_03450 0.11 +0.8 803,902 - CA264_03450 0.11 +0.7 803,945 + CA264_03450 0.12 +0.6 804,006 + CA264_03450 0.14 -0.1 804,006 + CA264_03450 0.14 +0.6 804,006 + CA264_03450 0.14 -1.1 804,007 - CA264_03450 0.14 +1.2 804,007 - CA264_03450 0.14 +0.1 804,007 - CA264_03450 0.14 +0.6 804,007 - CA264_03450 0.14 -0.5 804,081 - CA264_03450 0.17 -0.0 804,126 + CA264_03450 0.18 -0.1 804,127 - CA264_03450 0.18 -0.8 804,148 - CA264_03450 0.19 +0.1 804,153 + CA264_03450 0.19 +3.3 804,154 - CA264_03450 0.19 +0.7 804,154 - CA264_03450 0.19 -0.1 804,154 - CA264_03450 0.19 -1.2 804,154 - CA264_03450 0.19 -0.2 804,181 + CA264_03450 0.20 +0.3 804,182 - CA264_03450 0.20 -0.2 804,182 - CA264_03450 0.20 +2.5 804,182 - CA264_03450 0.20 +1.3 804,182 - CA264_03450 0.20 -0.6 804,241 + CA264_03450 0.22 +0.4 804,261 - CA264_03450 0.22 -0.6 804,261 - CA264_03450 0.22 -0.8 804,264 + CA264_03450 0.23 +0.5 804,265 - CA264_03450 0.23 +0.1 804,281 + CA264_03450 0.23 -0.5 804,281 + CA264_03450 0.23 -0.2 804,282 - CA264_03450 0.23 +0.1 804,282 - CA264_03450 0.23 +0.5 804,282 - CA264_03450 0.23 -0.7 804,289 - CA264_03450 0.23 -0.6 804,322 - CA264_03450 0.25 +0.3 804,325 + CA264_03450 0.25 -0.0 804,325 + CA264_03450 0.25 +0.8 804,325 + CA264_03450 0.25 -0.8 804,325 + CA264_03450 0.25 -0.1 804,325 + CA264_03450 0.25 -0.1 804,326 - CA264_03450 0.25 -0.5 804,385 - CA264_03450 0.27 +0.1 804,406 - CA264_03450 0.27 +0.5
Or see this region's nucleotide sequence