Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_03270

Experiment: m.b. Chlorite 0.2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_03265 and CA264_03270 are separated by 330 nucleotidesCA264_03270 and CA264_03275 overlap by 14 nucleotides CA264_03265: CA264_03265 - N-acyl-D-amino acid deacylase, at 768,069 to 769,640 _03265 CA264_03270: CA264_03270 - hypothetical protein, at 769,971 to 770,228 _03270 CA264_03275: CA264_03275 - ribokinase, at 770,215 to 771,165 _03275 Position (kb) 769 770 771Strain fitness (log2 ratio) -2 -1 0 1at 768.982 kb on - strand, within CA264_03265at 768.984 kb on + strand, within CA264_03265at 768.985 kb on - strand, within CA264_03265at 769.003 kb on - strand, within CA264_03265at 769.022 kb on - strand, within CA264_03265at 769.025 kb on - strand, within CA264_03265at 769.036 kb on + strand, within CA264_03265at 769.037 kb on - strand, within CA264_03265at 769.037 kb on - strand, within CA264_03265at 769.364 kb on + strand, within CA264_03265at 769.365 kb on - strand, within CA264_03265at 769.386 kb on + strand, within CA264_03265at 769.386 kb on + strand, within CA264_03265at 769.405 kb on + strand, within CA264_03265at 769.494 kb on + strandat 769.495 kb on - strandat 769.512 kb on + strandat 769.525 kb on + strandat 769.530 kb on + strandat 769.648 kb on + strandat 769.648 kb on + strandat 769.649 kb on - strandat 769.651 kb on - strandat 769.667 kb on + strandat 769.668 kb on - strandat 769.680 kb on - strandat 769.680 kb on - strandat 769.686 kb on + strandat 769.735 kb on + strandat 769.736 kb on - strandat 769.736 kb on - strandat 769.736 kb on - strandat 769.752 kb on + strandat 769.755 kb on - strandat 769.835 kb on + strandat 769.873 kb on - strandat 769.877 kb on + strandat 769.877 kb on + strandat 769.877 kb on + strandat 769.877 kb on + strandat 769.877 kb on + strandat 769.877 kb on + strandat 769.878 kb on - strandat 769.878 kb on - strandat 769.879 kb on + strandat 769.879 kb on + strandat 769.880 kb on - strandat 769.880 kb on - strandat 769.880 kb on - strandat 769.914 kb on + strandat 769.925 kb on + strandat 769.946 kb on + strandat 769.946 kb on + strandat 770.039 kb on + strand, within CA264_03270at 770.039 kb on + strand, within CA264_03270at 770.132 kb on - strand, within CA264_03270at 770.169 kb on - strand, within CA264_03270at 770.188 kb on - strand, within CA264_03270at 770.200 kb on + strand, within CA264_03270at 770.201 kb on - strand, within CA264_03270at 770.204 kb on + strandat 770.224 kb on + strandat 770.225 kb on - strandat 770.295 kb on - strandat 770.442 kb on + strand, within CA264_03275at 770.442 kb on + strand, within CA264_03275at 770.442 kb on + strand, within CA264_03275at 770.442 kb on + strand, within CA264_03275at 770.610 kb on + strand, within CA264_03275at 770.626 kb on - strand, within CA264_03275at 770.627 kb on + strand, within CA264_03275at 770.627 kb on + strand, within CA264_03275at 770.627 kb on + strand, within CA264_03275at 770.631 kb on - strand, within CA264_03275at 770.746 kb on - strand, within CA264_03275at 771.012 kb on + strand, within CA264_03275at 771.118 kb on + strandat 771.119 kb on - strandat 771.119 kb on - strandat 771.148 kb on + strandat 771.149 kb on - strandat 771.167 kb on + strandat 771.167 kb on + strandat 771.167 kb on + strandat 771.168 kb on - strandat 771.168 kb on - strandat 771.168 kb on - strandat 771.173 kb on - strandat 771.180 kb on - strandat 771.180 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM
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768,982 - CA264_03265 0.58 +0.0
768,984 + CA264_03265 0.58 -0.2
768,985 - CA264_03265 0.58 -1.3
769,003 - CA264_03265 0.59 +0.4
769,022 - CA264_03265 0.61 -0.4
769,025 - CA264_03265 0.61 -0.3
769,036 + CA264_03265 0.62 -0.2
769,037 - CA264_03265 0.62 -1.7
769,037 - CA264_03265 0.62 -0.5
769,364 + CA264_03265 0.82 -1.3
769,365 - CA264_03265 0.82 -2.1
769,386 + CA264_03265 0.84 -1.3
769,386 + CA264_03265 0.84 -1.8
769,405 + CA264_03265 0.85 -0.4
769,494 + -1.6
769,495 - -0.1
769,512 + -2.6
769,525 + -1.0
769,530 + -1.4
769,648 + -1.2
769,648 + +0.4
769,649 - -0.5
769,651 - -0.0
769,667 + -1.2
769,668 - -1.1
769,680 - -2.0
769,680 - -0.3
769,686 + -1.2
769,735 + -2.0
769,736 - -1.5
769,736 - -0.5
769,736 - -0.8
769,752 + -1.2
769,755 - -1.2
769,835 + -1.1
769,873 - -0.9
769,877 + -0.9
769,877 + -1.0
769,877 + -1.6
769,877 + -0.3
769,877 + -0.6
769,877 + -0.3
769,878 - +0.1
769,878 - +0.6
769,879 + -1.3
769,879 + +0.2
769,880 - -2.0
769,880 - -0.9
769,880 - -1.6
769,914 + -0.1
769,925 + -0.4
769,946 + -2.3
769,946 + -0.0
770,039 + CA264_03270 0.26 +1.2
770,039 + CA264_03270 0.26 -0.7
770,132 - CA264_03270 0.62 +0.2
770,169 - CA264_03270 0.77 +0.0
770,188 - CA264_03270 0.84 +0.7
770,200 + CA264_03270 0.89 -0.6
770,201 - CA264_03270 0.89 -0.3
770,204 + -0.6
770,224 + +0.8
770,225 - +0.1
770,295 - +0.1
770,442 + CA264_03275 0.24 +0.3
770,442 + CA264_03275 0.24 +0.8
770,442 + CA264_03275 0.24 +0.3
770,442 + CA264_03275 0.24 -0.6
770,610 + CA264_03275 0.42 +0.0
770,626 - CA264_03275 0.43 -0.3
770,627 + CA264_03275 0.43 +0.1
770,627 + CA264_03275 0.43 -0.6
770,627 + CA264_03275 0.43 +0.8
770,631 - CA264_03275 0.44 +0.1
770,746 - CA264_03275 0.56 -0.0
771,012 + CA264_03275 0.84 +0.6
771,118 + -1.3
771,119 - -0.1
771,119 - -0.9
771,148 + -0.1
771,149 - -0.4
771,167 + -0.4
771,167 + +1.1
771,167 + -0.3
771,168 - -0.4
771,168 - +0.4
771,168 - +0.8
771,173 - -0.2
771,180 - -0.3
771,180 - -0.4

Or see this region's nucleotide sequence