Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02330 and CA264_02335 are separated by 336 nucleotides CA264_02335 and CA264_02340 are separated by 343 nucleotides
CA264_02330: CA264_02330 - hypothetical protein, at 538,003 to 539,208
_02330
CA264_02335: CA264_02335 - hypothetical protein, at 539,545 to 540,114
_02335
CA264_02340: CA264_02340 - hypothetical protein, at 540,458 to 541,957
_02340
Position (kb) 539
540
541 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 538.567 kb on + strand, within CA264_02330 at 538.567 kb on + strand, within CA264_02330 at 538.568 kb on - strand, within CA264_02330 at 538.615 kb on - strand, within CA264_02330 at 538.627 kb on - strand, within CA264_02330 at 538.744 kb on + strand, within CA264_02330 at 538.745 kb on - strand, within CA264_02330 at 538.782 kb on + strand, within CA264_02330 at 538.782 kb on + strand, within CA264_02330 at 538.859 kb on + strand, within CA264_02330 at 538.860 kb on - strand, within CA264_02330 at 538.994 kb on - strand, within CA264_02330 at 539.086 kb on - strand, within CA264_02330 at 539.096 kb on + strand at 539.124 kb on + strand at 539.129 kb on + strand at 539.129 kb on + strand at 539.129 kb on + strand at 539.206 kb on + strand at 539.223 kb on - strand at 539.223 kb on - strand at 539.316 kb on - strand at 539.316 kb on - strand at 539.333 kb on + strand at 539.334 kb on - strand at 539.346 kb on + strand at 539.362 kb on + strand at 539.363 kb on - strand at 539.364 kb on + strand at 539.369 kb on + strand at 539.369 kb on + strand at 539.469 kb on - strand at 539.469 kb on - strand at 539.476 kb on + strand at 539.477 kb on - strand at 539.483 kb on + strand at 539.501 kb on + strand at 539.510 kb on + strand at 539.511 kb on - strand at 539.524 kb on - strand at 539.538 kb on - strand at 539.624 kb on + strand, within CA264_02335 at 539.624 kb on + strand, within CA264_02335 at 539.625 kb on - strand, within CA264_02335 at 539.795 kb on + strand, within CA264_02335 at 539.796 kb on - strand, within CA264_02335 at 539.796 kb on - strand, within CA264_02335 at 539.861 kb on - strand, within CA264_02335 at 539.936 kb on - strand, within CA264_02335 at 539.960 kb on - strand, within CA264_02335 at 539.960 kb on - strand, within CA264_02335 at 540.048 kb on + strand, within CA264_02335 at 540.051 kb on + strand, within CA264_02335 at 540.052 kb on - strand, within CA264_02335 at 540.052 kb on - strand, within CA264_02335 at 540.060 kb on + strand at 540.060 kb on + strand at 540.060 kb on + strand at 540.061 kb on - strand at 540.061 kb on - strand at 540.061 kb on - strand at 540.061 kb on - strand at 540.061 kb on - strand at 540.112 kb on + strand at 540.113 kb on - strand at 540.156 kb on + strand at 540.245 kb on + strand at 540.389 kb on - strand at 540.390 kb on + strand at 540.390 kb on + strand at 540.391 kb on - strand at 540.391 kb on - strand at 540.393 kb on + strand at 540.393 kb on + strand at 540.393 kb on + strand at 540.394 kb on - strand at 540.400 kb on + strand at 540.401 kb on - strand at 540.506 kb on - strand at 540.510 kb on + strand at 540.563 kb on - strand at 540.576 kb on + strand at 540.747 kb on + strand, within CA264_02340 at 540.779 kb on - strand, within CA264_02340 at 540.924 kb on - strand, within CA264_02340 at 540.937 kb on - strand, within CA264_02340 at 540.939 kb on - strand, within CA264_02340 at 541.018 kb on + strand, within CA264_02340 at 541.019 kb on - strand, within CA264_02340 at 541.054 kb on + strand, within CA264_02340 at 541.055 kb on - strand, within CA264_02340 at 541.063 kb on + strand, within CA264_02340 at 541.097 kb on - strand, within CA264_02340
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 538,567 + CA264_02330 0.47 -1.4 538,567 + CA264_02330 0.47 -1.7 538,568 - CA264_02330 0.47 -0.4 538,615 - CA264_02330 0.51 -0.2 538,627 - CA264_02330 0.52 -0.7 538,744 + CA264_02330 0.61 -0.1 538,745 - CA264_02330 0.62 -0.5 538,782 + CA264_02330 0.65 -0.1 538,782 + CA264_02330 0.65 +0.3 538,859 + CA264_02330 0.71 -0.5 538,860 - CA264_02330 0.71 +0.0 538,994 - CA264_02330 0.82 -0.1 539,086 - CA264_02330 0.90 -0.3 539,096 + -0.3 539,124 + +0.4 539,129 + -0.8 539,129 + +0.6 539,129 + +0.6 539,206 + +0.3 539,223 - -1.0 539,223 - +0.7 539,316 - +0.4 539,316 - +0.1 539,333 + +0.2 539,334 - -0.9 539,346 + +0.3 539,362 + -0.4 539,363 - -0.6 539,364 + +0.2 539,369 + +1.0 539,369 + -0.7 539,469 - +0.9 539,469 - -0.0 539,476 + +0.1 539,477 - -0.7 539,483 + -0.0 539,501 + +0.6 539,510 + -0.6 539,511 - +0.8 539,524 - +1.0 539,538 - +0.2 539,624 + CA264_02335 0.14 +1.2 539,624 + CA264_02335 0.14 -2.6 539,625 - CA264_02335 0.14 +0.2 539,795 + CA264_02335 0.44 +1.1 539,796 - CA264_02335 0.44 -0.3 539,796 - CA264_02335 0.44 -0.1 539,861 - CA264_02335 0.55 +0.3 539,936 - CA264_02335 0.69 -0.1 539,960 - CA264_02335 0.73 +3.0 539,960 - CA264_02335 0.73 -0.8 540,048 + CA264_02335 0.88 +1.9 540,051 + CA264_02335 0.89 +0.6 540,052 - CA264_02335 0.89 +1.3 540,052 - CA264_02335 0.89 +0.1 540,060 + -0.3 540,060 + -0.9 540,060 + +0.8 540,061 - +1.4 540,061 - +0.1 540,061 - -0.2 540,061 - -0.3 540,061 - +0.2 540,112 + +0.1 540,113 - +0.3 540,156 + +0.4 540,245 + -0.6 540,389 - -0.5 540,390 + -3.0 540,390 + +0.9 540,391 - +0.5 540,391 - -0.3 540,393 + -1.3 540,393 + +0.6 540,393 + -0.4 540,394 - +1.0 540,400 + +0.6 540,401 - +0.3 540,506 - -1.2 540,510 + -0.1 540,563 - +0.3 540,576 + -0.1 540,747 + CA264_02340 0.19 +0.4 540,779 - CA264_02340 0.21 +0.1 540,924 - CA264_02340 0.31 -0.9 540,937 - CA264_02340 0.32 -0.6 540,939 - CA264_02340 0.32 -0.1 541,018 + CA264_02340 0.37 +0.0 541,019 - CA264_02340 0.37 -0.1 541,054 + CA264_02340 0.40 +0.2 541,055 - CA264_02340 0.40 -0.3 541,063 + CA264_02340 0.40 +0.2 541,097 - CA264_02340 0.43 -0.6
Or see this region's nucleotide sequence