Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01975 and CA264_01980 are separated by 146 nucleotides CA264_01980 and CA264_01985 are separated by 212 nucleotides CA264_01985 and CA264_01990 are separated by 134 nucleotides CA264_01990 and CA264_01995 are separated by 73 nucleotides
CA264_01975: CA264_01975 - hypothetical protein, at 457,035 to 458,396
_01975
CA264_01980: CA264_01980 - hypothetical protein, at 458,543 to 459,172
_01980
CA264_01985: CA264_01985 - tRNA-Lys, at 459,385 to 459,460
_01985
CA264_01990: CA264_01990 - tRNA-Lys, at 459,595 to 459,670
_01990
CA264_01995: CA264_01995 - SH3 domain-containing protein, at 459,744 to 460,481
_01995
Position (kb) 458
459
460 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 457.550 kb on + strand, within CA264_01975 at 457.595 kb on + strand, within CA264_01975 at 457.708 kb on + strand, within CA264_01975 at 457.709 kb on - strand, within CA264_01975 at 457.713 kb on + strand, within CA264_01975 at 457.714 kb on - strand, within CA264_01975 at 457.892 kb on - strand, within CA264_01975 at 457.914 kb on + strand, within CA264_01975 at 457.915 kb on - strand, within CA264_01975 at 458.035 kb on + strand, within CA264_01975 at 458.035 kb on + strand, within CA264_01975 at 458.036 kb on - strand, within CA264_01975 at 458.093 kb on + strand, within CA264_01975 at 458.093 kb on + strand, within CA264_01975 at 458.094 kb on - strand, within CA264_01975 at 458.094 kb on - strand, within CA264_01975 at 458.099 kb on - strand, within CA264_01975 at 458.099 kb on - strand, within CA264_01975 at 458.099 kb on - strand, within CA264_01975 at 458.106 kb on + strand, within CA264_01975 at 458.106 kb on + strand, within CA264_01975 at 458.107 kb on - strand, within CA264_01975 at 458.126 kb on + strand, within CA264_01975 at 458.141 kb on + strand, within CA264_01975 at 458.142 kb on - strand, within CA264_01975 at 458.212 kb on - strand, within CA264_01975 at 458.251 kb on + strand, within CA264_01975 at 458.252 kb on - strand, within CA264_01975 at 458.281 kb on - strand at 458.335 kb on + strand at 458.359 kb on - strand at 458.426 kb on + strand at 458.426 kb on + strand at 458.475 kb on - strand at 458.506 kb on - strand at 458.516 kb on + strand at 458.516 kb on + strand at 458.630 kb on + strand, within CA264_01980 at 458.631 kb on - strand, within CA264_01980 at 458.631 kb on - strand, within CA264_01980 at 458.650 kb on + strand, within CA264_01980 at 458.651 kb on - strand, within CA264_01980 at 458.687 kb on + strand, within CA264_01980 at 458.727 kb on - strand, within CA264_01980 at 458.727 kb on - strand, within CA264_01980 at 458.772 kb on - strand, within CA264_01980 at 458.772 kb on - strand, within CA264_01980 at 458.774 kb on - strand, within CA264_01980 at 458.799 kb on + strand, within CA264_01980 at 458.838 kb on + strand, within CA264_01980 at 458.907 kb on + strand, within CA264_01980 at 458.990 kb on + strand, within CA264_01980 at 458.991 kb on - strand, within CA264_01980 at 459.083 kb on - strand, within CA264_01980 at 459.085 kb on - strand, within CA264_01980 at 459.159 kb on - strand at 459.160 kb on + strand at 459.185 kb on - strand at 459.277 kb on + strand at 459.420 kb on - strand, within CA264_01985 at 459.425 kb on - strand, within CA264_01985 at 459.635 kb on - strand, within CA264_01990 at 459.643 kb on - strand, within CA264_01990 at 459.683 kb on - strand at 459.842 kb on + strand, within CA264_01995 at 459.894 kb on + strand, within CA264_01995 at 459.895 kb on - strand, within CA264_01995 at 459.954 kb on + strand, within CA264_01995 at 459.993 kb on + strand, within CA264_01995 at 459.993 kb on + strand, within CA264_01995 at 459.996 kb on + strand, within CA264_01995 at 460.011 kb on + strand, within CA264_01995 at 460.012 kb on - strand, within CA264_01995 at 460.012 kb on - strand, within CA264_01995 at 460.075 kb on + strand, within CA264_01995 at 460.075 kb on + strand, within CA264_01995 at 460.089 kb on + strand, within CA264_01995 at 460.090 kb on - strand, within CA264_01995 at 460.131 kb on + strand, within CA264_01995 at 460.131 kb on + strand, within CA264_01995 at 460.131 kb on + strand, within CA264_01995 at 460.131 kb on + strand, within CA264_01995 at 460.132 kb on - strand, within CA264_01995 at 460.132 kb on - strand, within CA264_01995 at 460.132 kb on - strand, within CA264_01995
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 457,550 + CA264_01975 0.38 -0.1 457,595 + CA264_01975 0.41 +0.2 457,708 + CA264_01975 0.49 -0.1 457,709 - CA264_01975 0.49 -1.0 457,713 + CA264_01975 0.50 -0.4 457,714 - CA264_01975 0.50 +0.2 457,892 - CA264_01975 0.63 -0.0 457,914 + CA264_01975 0.65 -0.4 457,915 - CA264_01975 0.65 +0.3 458,035 + CA264_01975 0.73 +0.2 458,035 + CA264_01975 0.73 -0.5 458,036 - CA264_01975 0.73 +0.4 458,093 + CA264_01975 0.78 -0.0 458,093 + CA264_01975 0.78 -0.6 458,094 - CA264_01975 0.78 -0.8 458,094 - CA264_01975 0.78 +0.1 458,099 - CA264_01975 0.78 +0.3 458,099 - CA264_01975 0.78 -0.2 458,099 - CA264_01975 0.78 +0.5 458,106 + CA264_01975 0.79 +1.5 458,106 + CA264_01975 0.79 +0.1 458,107 - CA264_01975 0.79 +1.0 458,126 + CA264_01975 0.80 +0.3 458,141 + CA264_01975 0.81 -0.4 458,142 - CA264_01975 0.81 -0.7 458,212 - CA264_01975 0.86 -0.2 458,251 + CA264_01975 0.89 -0.8 458,252 - CA264_01975 0.89 -0.1 458,281 - +0.5 458,335 + -2.3 458,359 - -0.0 458,426 + +0.1 458,426 + +0.0 458,475 - -0.1 458,506 - -0.5 458,516 + -2.4 458,516 + +0.3 458,630 + CA264_01980 0.14 -0.7 458,631 - CA264_01980 0.14 -0.5 458,631 - CA264_01980 0.14 +0.3 458,650 + CA264_01980 0.17 -0.3 458,651 - CA264_01980 0.17 -0.9 458,687 + CA264_01980 0.23 -1.2 458,727 - CA264_01980 0.29 -0.5 458,727 - CA264_01980 0.29 -1.4 458,772 - CA264_01980 0.36 -2.1 458,772 - CA264_01980 0.36 -0.8 458,774 - CA264_01980 0.37 -0.7 458,799 + CA264_01980 0.41 -0.0 458,838 + CA264_01980 0.47 -2.1 458,907 + CA264_01980 0.58 -3.1 458,990 + CA264_01980 0.71 -1.4 458,991 - CA264_01980 0.71 -1.0 459,083 - CA264_01980 0.86 -0.5 459,085 - CA264_01980 0.86 -0.7 459,159 - +0.5 459,160 + -0.1 459,185 - -0.8 459,277 + +0.2 459,420 - CA264_01985 0.46 -1.0 459,425 - CA264_01985 0.53 +0.2 459,635 - CA264_01990 0.53 -2.2 459,643 - CA264_01990 0.63 -0.3 459,683 - +0.4 459,842 + CA264_01995 0.13 +0.6 459,894 + CA264_01995 0.20 +0.2 459,895 - CA264_01995 0.20 +0.2 459,954 + CA264_01995 0.28 -0.4 459,993 + CA264_01995 0.34 -0.1 459,993 + CA264_01995 0.34 -0.2 459,996 + CA264_01995 0.34 +0.4 460,011 + CA264_01995 0.36 +0.5 460,012 - CA264_01995 0.36 +0.7 460,012 - CA264_01995 0.36 +0.1 460,075 + CA264_01995 0.45 +1.2 460,075 + CA264_01995 0.45 -0.1 460,089 + CA264_01995 0.47 +0.7 460,090 - CA264_01995 0.47 -0.2 460,131 + CA264_01995 0.52 +1.2 460,131 + CA264_01995 0.52 -0.1 460,131 + CA264_01995 0.52 -0.3 460,131 + CA264_01995 0.52 -0.1 460,132 - CA264_01995 0.53 +0.5 460,132 - CA264_01995 0.53 +0.1 460,132 - CA264_01995 0.53 -0.0
Or see this region's nucleotide sequence