Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16865 and IAI46_16870 are separated by 258 nucleotides IAI46_16870 and IAI46_16875 overlap by 4 nucleotides
IAI46_16865: IAI46_16865 - sugar glycosyltransferase, at 3,535,135 to 3,536,043
_16865
IAI46_16870: IAI46_16870 - alkylhydroperoxidase domain protein, at 3,536,302 to 3,537,420
_16870
IAI46_16875: IAI46_16875 - putative FMN-dependent luciferase-like monooxygenase, at 3,537,417 to 3,538,463
_16875
Position (kb)
3536
3537
3538 Strain fitness (log2 ratio)
-1
0
1
2 at 3535.375 kb on + strand, within IAI46_16865 at 3535.418 kb on + strand, within IAI46_16865 at 3535.419 kb on - strand, within IAI46_16865 at 3535.521 kb on - strand, within IAI46_16865 at 3535.627 kb on - strand, within IAI46_16865 at 3535.813 kb on - strand, within IAI46_16865 at 3535.856 kb on - strand, within IAI46_16865 at 3535.897 kb on + strand, within IAI46_16865 at 3535.899 kb on + strand, within IAI46_16865 at 3535.899 kb on + strand, within IAI46_16865 at 3535.899 kb on + strand, within IAI46_16865 at 3535.919 kb on + strand, within IAI46_16865 at 3536.013 kb on - strand at 3536.028 kb on + strand at 3536.046 kb on + strand at 3536.060 kb on - strand at 3536.106 kb on + strand at 3536.106 kb on + strand at 3536.107 kb on - strand at 3536.122 kb on - strand at 3536.122 kb on - strand at 3536.238 kb on + strand at 3536.245 kb on + strand at 3536.609 kb on + strand, within IAI46_16870 at 3536.609 kb on + strand, within IAI46_16870 at 3536.610 kb on - strand, within IAI46_16870 at 3536.610 kb on - strand, within IAI46_16870 at 3536.610 kb on - strand, within IAI46_16870 at 3536.661 kb on + strand, within IAI46_16870 at 3536.662 kb on - strand, within IAI46_16870 at 3537.188 kb on + strand, within IAI46_16870 at 3537.300 kb on - strand, within IAI46_16870 at 3537.300 kb on - strand, within IAI46_16870 at 3537.445 kb on + strand at 3537.516 kb on - strand at 3537.549 kb on - strand, within IAI46_16875 at 3537.829 kb on + strand, within IAI46_16875 at 3537.830 kb on - strand, within IAI46_16875 at 3537.899 kb on + strand, within IAI46_16875
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 3,535,375 + IAI46_16865 0.26 -0.6 3,535,418 + IAI46_16865 0.31 -0.7 3,535,419 - IAI46_16865 0.31 +0.1 3,535,521 - IAI46_16865 0.42 +0.6 3,535,627 - IAI46_16865 0.54 +0.7 3,535,813 - IAI46_16865 0.75 +0.4 3,535,856 - IAI46_16865 0.79 -0.1 3,535,897 + IAI46_16865 0.84 -0.1 3,535,899 + IAI46_16865 0.84 -1.0 3,535,899 + IAI46_16865 0.84 +1.8 3,535,899 + IAI46_16865 0.84 +0.4 3,535,919 + IAI46_16865 0.86 +0.4 3,536,013 - -0.3 3,536,028 + +0.5 3,536,046 + -0.9 3,536,060 - -1.2 3,536,106 + +0.6 3,536,106 + +0.6 3,536,107 - +0.3 3,536,122 - -1.2 3,536,122 - +1.2 3,536,238 + -0.7 3,536,245 + +0.0 3,536,609 + IAI46_16870 0.27 -0.7 3,536,609 + IAI46_16870 0.27 +0.3 3,536,610 - IAI46_16870 0.28 +0.3 3,536,610 - IAI46_16870 0.28 -0.7 3,536,610 - IAI46_16870 0.28 +0.3 3,536,661 + IAI46_16870 0.32 +0.9 3,536,662 - IAI46_16870 0.32 +0.2 3,537,188 + IAI46_16870 0.79 -1.2 3,537,300 - IAI46_16870 0.89 +0.6 3,537,300 - IAI46_16870 0.89 +0.6 3,537,445 + +0.1 3,537,516 - +0.6 3,537,549 - IAI46_16875 0.13 +0.2 3,537,829 + IAI46_16875 0.39 +0.0 3,537,830 - IAI46_16875 0.39 -0.5 3,537,899 + IAI46_16875 0.46 -0.1
Or see this region's nucleotide sequence