Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16135 and IAI46_16140 are separated by 256 nucleotides IAI46_16140 and IAI46_16145 are separated by 723 nucleotides
IAI46_16135: IAI46_16135 - aminopeptidase P family protein, at 3,383,435 to 3,384,652
_16135
IAI46_16140: IAI46_16140 - hypothetical protein, at 3,384,909 to 3,385,259
_16140
IAI46_16145: IAI46_16145 - Dyp-type peroxidase, at 3,385,983 to 3,386,939
_16145
Position (kb)
3384
3385
3386 Strain fitness (log2 ratio)
-2
-1
0
1 at 3383.998 kb on + strand, within IAI46_16135 at 3384.110 kb on + strand, within IAI46_16135 at 3384.185 kb on - strand, within IAI46_16135 at 3384.227 kb on + strand, within IAI46_16135 at 3384.227 kb on + strand, within IAI46_16135 at 3384.228 kb on - strand, within IAI46_16135 at 3384.251 kb on + strand, within IAI46_16135 at 3384.251 kb on + strand, within IAI46_16135 at 3384.258 kb on - strand, within IAI46_16135 at 3384.540 kb on + strand at 3384.540 kb on + strand at 3384.632 kb on - strand at 3384.775 kb on + strand at 3384.874 kb on - strand at 3384.875 kb on + strand at 3385.041 kb on + strand, within IAI46_16140 at 3385.042 kb on - strand, within IAI46_16140 at 3385.045 kb on - strand, within IAI46_16140 at 3385.049 kb on + strand, within IAI46_16140 at 3385.198 kb on + strand, within IAI46_16140 at 3385.198 kb on + strand, within IAI46_16140 at 3385.198 kb on + strand, within IAI46_16140 at 3385.198 kb on + strand, within IAI46_16140 at 3385.199 kb on - strand, within IAI46_16140 at 3385.257 kb on + strand at 3385.279 kb on + strand at 3385.448 kb on + strand at 3385.449 kb on - strand at 3385.602 kb on - strand at 3385.609 kb on - strand at 3385.612 kb on - strand at 3385.623 kb on + strand at 3385.752 kb on - strand at 3385.850 kb on - strand at 3385.942 kb on - strand at 3385.942 kb on - strand at 3385.952 kb on + strand at 3385.953 kb on - strand at 3385.982 kb on + strand at 3385.982 kb on + strand at 3385.982 kb on + strand at 3385.983 kb on - strand at 3385.983 kb on - strand at 3385.983 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 3,383,998 + IAI46_16135 0.46 -0.5 3,384,110 + IAI46_16135 0.55 +0.7 3,384,185 - IAI46_16135 0.62 -0.1 3,384,227 + IAI46_16135 0.65 +0.8 3,384,227 + IAI46_16135 0.65 +1.6 3,384,228 - IAI46_16135 0.65 -0.5 3,384,251 + IAI46_16135 0.67 +0.6 3,384,251 + IAI46_16135 0.67 -1.2 3,384,258 - IAI46_16135 0.68 -0.8 3,384,540 + +0.5 3,384,540 + -0.1 3,384,632 - -1.0 3,384,775 + -0.8 3,384,874 - -0.8 3,384,875 + +0.0 3,385,041 + IAI46_16140 0.38 -0.5 3,385,042 - IAI46_16140 0.38 +0.5 3,385,045 - IAI46_16140 0.39 -1.5 3,385,049 + IAI46_16140 0.40 -0.7 3,385,198 + IAI46_16140 0.82 -0.3 3,385,198 + IAI46_16140 0.82 -0.1 3,385,198 + IAI46_16140 0.82 +0.3 3,385,198 + IAI46_16140 0.82 +1.7 3,385,199 - IAI46_16140 0.83 +1.5 3,385,257 + -0.6 3,385,279 + +0.1 3,385,448 + +1.5 3,385,449 - -2.0 3,385,602 - -0.0 3,385,609 - +0.5 3,385,612 - -0.5 3,385,623 + -0.1 3,385,752 - -0.3 3,385,850 - +0.4 3,385,942 - -0.3 3,385,942 - -0.3 3,385,952 + +0.2 3,385,953 - -0.3 3,385,982 + -0.7 3,385,982 + +0.2 3,385,982 + -0.2 3,385,983 - +0.3 3,385,983 - +0.1 3,385,983 - +0.9
Or see this region's nucleotide sequence