Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16030 and IAI46_16035 are separated by 181 nucleotides IAI46_16035 and IAI46_16040 are separated by 32 nucleotides
IAI46_16030: IAI46_16030 - Tar ligand binding domain-containing protein, at 3,361,853 to 3,363,523
_16030
IAI46_16035: IAI46_16035 - chemotaxis protein CheW, at 3,363,705 to 3,364,205
_16035
IAI46_16040: IAI46_16040 - chemotaxis protein CheA, at 3,364,238 to 3,366,211
_16040
Position (kb)
3363
3364
3365 Strain fitness (log2 ratio)
-1
0
1 at 3362.749 kb on + strand, within IAI46_16030 at 3362.749 kb on + strand, within IAI46_16030 at 3362.915 kb on + strand, within IAI46_16030 at 3362.965 kb on + strand, within IAI46_16030 at 3362.965 kb on + strand, within IAI46_16030 at 3362.965 kb on + strand, within IAI46_16030 at 3362.965 kb on + strand, within IAI46_16030 at 3362.966 kb on - strand, within IAI46_16030 at 3362.966 kb on - strand, within IAI46_16030 at 3362.966 kb on - strand, within IAI46_16030 at 3362.991 kb on + strand, within IAI46_16030 at 3362.992 kb on - strand, within IAI46_16030 at 3363.024 kb on + strand, within IAI46_16030 at 3363.024 kb on + strand, within IAI46_16030 at 3363.024 kb on + strand, within IAI46_16030 at 3363.024 kb on + strand, within IAI46_16030 at 3363.024 kb on + strand, within IAI46_16030 at 3363.025 kb on - strand, within IAI46_16030 at 3363.025 kb on - strand, within IAI46_16030 at 3363.025 kb on - strand, within IAI46_16030 at 3363.138 kb on + strand, within IAI46_16030 at 3363.210 kb on + strand, within IAI46_16030 at 3363.210 kb on + strand, within IAI46_16030 at 3363.211 kb on - strand, within IAI46_16030 at 3363.211 kb on - strand, within IAI46_16030 at 3363.563 kb on + strand at 3363.621 kb on + strand at 3363.622 kb on - strand at 3364.056 kb on - strand, within IAI46_16035 at 3364.109 kb on + strand, within IAI46_16035 at 3364.139 kb on + strand, within IAI46_16035 at 3364.964 kb on - strand, within IAI46_16040
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 3,362,749 + IAI46_16030 0.54 +0.7 3,362,749 + IAI46_16030 0.54 +0.6 3,362,915 + IAI46_16030 0.64 +0.2 3,362,965 + IAI46_16030 0.67 +0.3 3,362,965 + IAI46_16030 0.67 +0.5 3,362,965 + IAI46_16030 0.67 -1.3 3,362,965 + IAI46_16030 0.67 +0.3 3,362,966 - IAI46_16030 0.67 +1.0 3,362,966 - IAI46_16030 0.67 -0.9 3,362,966 - IAI46_16030 0.67 +0.0 3,362,991 + IAI46_16030 0.68 +0.2 3,362,992 - IAI46_16030 0.68 +1.0 3,363,024 + IAI46_16030 0.70 -1.1 3,363,024 + IAI46_16030 0.70 -0.5 3,363,024 + IAI46_16030 0.70 -0.3 3,363,024 + IAI46_16030 0.70 +0.4 3,363,024 + IAI46_16030 0.70 +0.3 3,363,025 - IAI46_16030 0.70 -0.9 3,363,025 - IAI46_16030 0.70 +1.1 3,363,025 - IAI46_16030 0.70 +0.1 3,363,138 + IAI46_16030 0.77 +0.6 3,363,210 + IAI46_16030 0.81 -0.3 3,363,210 + IAI46_16030 0.81 +1.1 3,363,211 - IAI46_16030 0.81 -0.0 3,363,211 - IAI46_16030 0.81 -0.0 3,363,563 + -0.3 3,363,621 + -0.5 3,363,622 - -0.1 3,364,056 - IAI46_16035 0.70 +0.2 3,364,109 + IAI46_16035 0.81 +1.0 3,364,139 + IAI46_16035 0.87 -0.2 3,364,964 - IAI46_16040 0.37 -0.3
Or see this region's nucleotide sequence