Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13115 and IAI46_13120 are separated by 88 nucleotides IAI46_13120 and IAI46_13125 are separated by 3 nucleotides IAI46_13125 and IAI46_13130 are separated by 0 nucleotides IAI46_13130 and IAI46_13135 are separated by 204 nucleotides
IAI46_13115: IAI46_13115 - Zn-dependent hydrolase, at 2,798,188 to 2,799,414
_13115
IAI46_13120: IAI46_13120 - helix-turn-helix transcriptional regulator, at 2,799,503 to 2,799,850
_13120
IAI46_13125: IAI46_13125 - SRPBCC family protein, at 2,799,854 to 2,800,387
_13125
IAI46_13130: IAI46_13130 - transporter, at 2,800,388 to 2,801,416
_13130
IAI46_13135: IAI46_13135 - inorganic phosphate transporter, at 2,801,621 to 2,803,231
_13135
Position (kb)
2800
2801
2802 Strain fitness (log2 ratio)
-1
0
1 at 2799.474 kb on - strand at 2799.492 kb on + strand at 2799.716 kb on - strand, within IAI46_13120 at 2799.716 kb on - strand, within IAI46_13120 at 2799.770 kb on + strand, within IAI46_13120 at 2799.811 kb on - strand, within IAI46_13120 at 2799.874 kb on + strand at 2799.874 kb on + strand at 2799.875 kb on - strand at 2799.875 kb on - strand at 2800.012 kb on - strand, within IAI46_13125 at 2800.070 kb on + strand, within IAI46_13125 at 2800.071 kb on - strand, within IAI46_13125 at 2800.072 kb on + strand, within IAI46_13125 at 2800.080 kb on + strand, within IAI46_13125 at 2800.285 kb on + strand, within IAI46_13125 at 2800.572 kb on + strand, within IAI46_13130 at 2800.579 kb on + strand, within IAI46_13130 at 2800.610 kb on + strand, within IAI46_13130 at 2800.611 kb on - strand, within IAI46_13130 at 2800.798 kb on + strand, within IAI46_13130 at 2800.876 kb on - strand, within IAI46_13130 at 2801.046 kb on + strand, within IAI46_13130 at 2801.055 kb on - strand, within IAI46_13130 at 2801.139 kb on - strand, within IAI46_13130 at 2801.350 kb on - strand at 2801.416 kb on + strand at 2801.469 kb on + strand at 2801.521 kb on + strand at 2801.524 kb on + strand at 2801.576 kb on - strand at 2801.576 kb on - strand at 2801.595 kb on - strand at 2801.621 kb on - strand at 2801.755 kb on - strand at 2801.765 kb on - strand at 2801.801 kb on + strand, within IAI46_13135 at 2801.903 kb on + strand, within IAI46_13135 at 2802.147 kb on + strand, within IAI46_13135 at 2802.276 kb on + strand, within IAI46_13135 at 2802.332 kb on + strand, within IAI46_13135 at 2802.333 kb on - strand, within IAI46_13135 at 2802.333 kb on - strand, within IAI46_13135 at 2802.333 kb on - strand, within IAI46_13135
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,799,474 - +0.3 2,799,492 + +0.9 2,799,716 - IAI46_13120 0.61 +1.0 2,799,716 - IAI46_13120 0.61 +0.8 2,799,770 + IAI46_13120 0.77 +1.2 2,799,811 - IAI46_13120 0.89 -0.5 2,799,874 + +1.1 2,799,874 + +0.8 2,799,875 - +0.8 2,799,875 - -0.2 2,800,012 - IAI46_13125 0.30 -0.1 2,800,070 + IAI46_13125 0.40 -0.5 2,800,071 - IAI46_13125 0.41 +1.6 2,800,072 + IAI46_13125 0.41 -0.6 2,800,080 + IAI46_13125 0.42 +0.2 2,800,285 + IAI46_13125 0.81 +0.5 2,800,572 + IAI46_13130 0.18 +0.9 2,800,579 + IAI46_13130 0.19 +0.1 2,800,610 + IAI46_13130 0.22 +1.6 2,800,611 - IAI46_13130 0.22 -0.5 2,800,798 + IAI46_13130 0.40 +0.4 2,800,876 - IAI46_13130 0.47 +0.4 2,801,046 + IAI46_13130 0.64 +0.2 2,801,055 - IAI46_13130 0.65 +0.4 2,801,139 - IAI46_13130 0.73 -0.5 2,801,350 - +0.0 2,801,416 + +0.2 2,801,469 + +1.2 2,801,521 + +0.2 2,801,524 + -0.3 2,801,576 - +0.9 2,801,576 - +0.4 2,801,595 - +0.9 2,801,621 - -0.4 2,801,755 - +0.5 2,801,765 - +0.1 2,801,801 + IAI46_13135 0.11 -0.3 2,801,903 + IAI46_13135 0.18 +0.3 2,802,147 + IAI46_13135 0.33 -0.2 2,802,276 + IAI46_13135 0.41 +1.6 2,802,332 + IAI46_13135 0.44 +0.1 2,802,333 - IAI46_13135 0.44 +0.0 2,802,333 - IAI46_13135 0.44 -0.0 2,802,333 - IAI46_13135 0.44 +0.0
Or see this region's nucleotide sequence