Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11870 and IAI46_11875 are separated by 160 nucleotides IAI46_11875 and IAI46_11880 are separated by 224 nucleotides
IAI46_11870: IAI46_11870 - FAD-dependent urate hydroxylase HpxO, at 2,511,687 to 2,512,844
_11870
IAI46_11875: IAI46_11875 - DUF1003 domain-containing protein, at 2,513,005 to 2,513,514
_11875
IAI46_11880: IAI46_11880 - xanthine dehydrogenase family protein molybdopterin-binding subunit, at 2,513,739 to 2,515,946
_11880
Position (kb)
2513
2514 Strain fitness (log2 ratio)
-1
0
1 at 2512.357 kb on + strand, within IAI46_11870 at 2512.358 kb on - strand, within IAI46_11870 at 2512.358 kb on - strand, within IAI46_11870 at 2512.504 kb on + strand, within IAI46_11870 at 2512.505 kb on - strand, within IAI46_11870 at 2512.684 kb on + strand, within IAI46_11870 at 2512.684 kb on + strand, within IAI46_11870 at 2512.685 kb on - strand, within IAI46_11870 at 2512.802 kb on + strand at 2512.860 kb on - strand at 2512.983 kb on - strand at 2512.995 kb on - strand at 2513.291 kb on - strand, within IAI46_11875 at 2513.293 kb on - strand, within IAI46_11875 at 2513.293 kb on - strand, within IAI46_11875 at 2513.506 kb on + strand at 2513.515 kb on + strand at 2513.516 kb on - strand at 2513.541 kb on + strand at 2513.543 kb on + strand at 2513.543 kb on + strand at 2513.548 kb on + strand at 2513.549 kb on - strand at 2513.625 kb on + strand at 2513.625 kb on + strand at 2513.633 kb on + strand at 2513.638 kb on + strand at 2513.638 kb on + strand at 2513.638 kb on + strand at 2513.643 kb on - strand at 2513.707 kb on + strand at 2513.707 kb on + strand at 2513.746 kb on + strand at 2513.840 kb on + strand at 2513.874 kb on + strand at 2513.875 kb on - strand at 2513.958 kb on + strand at 2514.048 kb on + strand, within IAI46_11880 at 2514.048 kb on + strand, within IAI46_11880 at 2514.049 kb on - strand, within IAI46_11880 at 2514.050 kb on + strand, within IAI46_11880 at 2514.051 kb on - strand, within IAI46_11880 at 2514.365 kb on - strand, within IAI46_11880 at 2514.473 kb on - strand, within IAI46_11880
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,512,357 + IAI46_11870 0.58 +0.7 2,512,358 - IAI46_11870 0.58 +0.0 2,512,358 - IAI46_11870 0.58 -0.4 2,512,504 + IAI46_11870 0.71 +0.8 2,512,505 - IAI46_11870 0.71 +0.5 2,512,684 + IAI46_11870 0.86 -0.2 2,512,684 + IAI46_11870 0.86 +0.5 2,512,685 - IAI46_11870 0.86 -0.0 2,512,802 + -0.2 2,512,860 - +0.2 2,512,983 - +0.6 2,512,995 - +0.8 2,513,291 - IAI46_11875 0.56 -0.2 2,513,293 - IAI46_11875 0.56 +1.2 2,513,293 - IAI46_11875 0.56 -0.1 2,513,506 + +0.9 2,513,515 + -0.3 2,513,516 - -0.1 2,513,541 + +0.5 2,513,543 + +1.0 2,513,543 + -0.1 2,513,548 + +0.2 2,513,549 - -0.2 2,513,625 + -0.1 2,513,625 + -0.3 2,513,633 + +1.3 2,513,638 + +0.1 2,513,638 + +0.6 2,513,638 + -0.5 2,513,643 - -0.2 2,513,707 + +1.2 2,513,707 + -0.9 2,513,746 + +0.9 2,513,840 + -1.1 2,513,874 + +0.6 2,513,875 - -1.1 2,513,958 + +0.1 2,514,048 + IAI46_11880 0.14 +0.3 2,514,048 + IAI46_11880 0.14 +0.2 2,514,049 - IAI46_11880 0.14 +0.5 2,514,050 + IAI46_11880 0.14 -0.8 2,514,051 - IAI46_11880 0.14 -0.1 2,514,365 - IAI46_11880 0.28 -1.6 2,514,473 - IAI46_11880 0.33 -0.4
Or see this region's nucleotide sequence