Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11540 and IAI46_11545 are separated by 177 nucleotides IAI46_11545 and IAI46_11550 overlap by 4 nucleotides IAI46_11550 and IAI46_11555 are separated by 9 nucleotides IAI46_11555 and IAI46_11560 are separated by 95 nucleotides
IAI46_11540: IAI46_11540 - adenosine deaminase, at 2,436,963 to 2,437,961
_11540
IAI46_11545: IAI46_11545 - AAA family ATPase, at 2,438,139 to 2,438,732
_11545
IAI46_11550: IAI46_11550 - PTS sugar transporter subunit IIA, at 2,438,729 to 2,439,166
_11550
IAI46_11555: IAI46_11555 - hypothetical protein, at 2,439,176 to 2,439,442
_11555
IAI46_11560: IAI46_11560 - class II fructose-bisphosphate aldolase, at 2,439,538 to 2,440,380
_11560
Position (kb)
2438
2439
2440 Strain fitness (log2 ratio)
-1
0
1
2 at 2437.869 kb on - strand at 2437.990 kb on - strand at 2438.088 kb on - strand at 2438.311 kb on + strand, within IAI46_11545 at 2438.311 kb on + strand, within IAI46_11545 at 2438.312 kb on - strand, within IAI46_11545 at 2438.442 kb on + strand, within IAI46_11545 at 2438.442 kb on + strand, within IAI46_11545 at 2438.572 kb on - strand, within IAI46_11545 at 2438.607 kb on - strand, within IAI46_11545 at 2438.623 kb on + strand, within IAI46_11545 at 2438.623 kb on + strand, within IAI46_11545 at 2438.623 kb on + strand, within IAI46_11545 at 2438.994 kb on + strand, within IAI46_11550 at 2439.017 kb on - strand, within IAI46_11550 at 2439.017 kb on - strand, within IAI46_11550 at 2439.017 kb on - strand, within IAI46_11550 at 2439.052 kb on + strand, within IAI46_11550 at 2439.052 kb on + strand, within IAI46_11550 at 2439.052 kb on + strand, within IAI46_11550 at 2439.055 kb on - strand, within IAI46_11550 at 2439.169 kb on + strand at 2439.170 kb on - strand at 2439.285 kb on + strand, within IAI46_11555 at 2439.368 kb on + strand, within IAI46_11555 at 2439.568 kb on + strand at 2439.569 kb on - strand at 2439.850 kb on + strand, within IAI46_11560 at 2439.916 kb on - strand, within IAI46_11560 at 2439.997 kb on - strand, within IAI46_11560 at 2439.997 kb on - strand, within IAI46_11560 at 2440.070 kb on + strand, within IAI46_11560
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,437,869 - -0.5 2,437,990 - -0.6 2,438,088 - -0.6 2,438,311 + IAI46_11545 0.29 +0.3 2,438,311 + IAI46_11545 0.29 +1.3 2,438,312 - IAI46_11545 0.29 +0.1 2,438,442 + IAI46_11545 0.51 -0.5 2,438,442 + IAI46_11545 0.51 -0.1 2,438,572 - IAI46_11545 0.73 -0.7 2,438,607 - IAI46_11545 0.79 +0.4 2,438,623 + IAI46_11545 0.81 -0.7 2,438,623 + IAI46_11545 0.81 -0.3 2,438,623 + IAI46_11545 0.81 +0.5 2,438,994 + IAI46_11550 0.61 -1.0 2,439,017 - IAI46_11550 0.66 +0.4 2,439,017 - IAI46_11550 0.66 +1.3 2,439,017 - IAI46_11550 0.66 +1.9 2,439,052 + IAI46_11550 0.74 +0.9 2,439,052 + IAI46_11550 0.74 -1.2 2,439,052 + IAI46_11550 0.74 +0.9 2,439,055 - IAI46_11550 0.74 +0.3 2,439,169 + +0.6 2,439,170 - +0.8 2,439,285 + IAI46_11555 0.41 +1.9 2,439,368 + IAI46_11555 0.72 -0.1 2,439,568 + +0.1 2,439,569 - -0.3 2,439,850 + IAI46_11560 0.37 +0.7 2,439,916 - IAI46_11560 0.45 -0.1 2,439,997 - IAI46_11560 0.54 -0.2 2,439,997 - IAI46_11560 0.54 +0.8 2,440,070 + IAI46_11560 0.63 -0.3
Or see this region's nucleotide sequence