Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11035 and IAI46_11040 overlap by 4 nucleotides IAI46_11040 and IAI46_11045 overlap by 4 nucleotides IAI46_11045 and IAI46_11050 are separated by 174 nucleotides IAI46_11050 and IAI46_11055 are separated by 57 nucleotides
IAI46_11035: IAI46_11035 - lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase, at 2,331,813 to 2,333,477
_11035
IAI46_11040: IAI46_11040 - 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE, at 2,333,474 to 2,333,821
_11040
IAI46_11045: IAI46_11045 - 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF, at 2,333,818 to 2,334,210
_11045
IAI46_11050: IAI46_11050 - C40 family peptidase, at 2,334,385 to 2,334,849
_11050
IAI46_11055: IAI46_11055 - lipoate--protein ligase A, at 2,334,907 to 2,335,920
_11055
Position (kb)
2334
2335 Strain fitness (log2 ratio)
-2
-1
0
1 at 2334.382 kb on - strand at 2334.382 kb on - strand at 2334.397 kb on - strand at 2334.435 kb on + strand, within IAI46_11050 at 2334.477 kb on + strand, within IAI46_11050 at 2334.477 kb on + strand, within IAI46_11050 at 2334.520 kb on + strand, within IAI46_11050 at 2334.538 kb on + strand, within IAI46_11050 at 2334.617 kb on + strand, within IAI46_11050 at 2334.617 kb on + strand, within IAI46_11050 at 2334.739 kb on + strand, within IAI46_11050 at 2334.739 kb on + strand, within IAI46_11050 at 2334.739 kb on + strand, within IAI46_11050 at 2334.740 kb on - strand, within IAI46_11050 at 2334.759 kb on + strand, within IAI46_11050 at 2334.812 kb on - strand at 2334.827 kb on - strand at 2334.912 kb on + strand at 2334.913 kb on - strand at 2334.917 kb on + strand at 2335.014 kb on - strand, within IAI46_11055 at 2335.040 kb on + strand, within IAI46_11055 at 2335.364 kb on + strand, within IAI46_11055 at 2335.534 kb on + strand, within IAI46_11055 at 2335.535 kb on - strand, within IAI46_11055 at 2335.538 kb on - strand, within IAI46_11055
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,334,382 - +0.1 2,334,382 - -0.4 2,334,397 - -0.9 2,334,435 + IAI46_11050 0.11 +0.8 2,334,477 + IAI46_11050 0.20 +0.5 2,334,477 + IAI46_11050 0.20 +0.3 2,334,520 + IAI46_11050 0.29 -0.0 2,334,538 + IAI46_11050 0.33 +0.6 2,334,617 + IAI46_11050 0.50 +1.1 2,334,617 + IAI46_11050 0.50 -0.2 2,334,739 + IAI46_11050 0.76 +1.1 2,334,739 + IAI46_11050 0.76 -0.4 2,334,739 + IAI46_11050 0.76 +0.4 2,334,740 - IAI46_11050 0.76 +0.4 2,334,759 + IAI46_11050 0.80 -2.1 2,334,812 - +0.5 2,334,827 - -0.0 2,334,912 + -1.6 2,334,913 - -0.4 2,334,917 + +0.1 2,335,014 - IAI46_11055 0.11 +0.5 2,335,040 + IAI46_11055 0.13 +0.6 2,335,364 + IAI46_11055 0.45 -0.6 2,335,534 + IAI46_11055 0.62 -1.3 2,335,535 - IAI46_11055 0.62 +0.3 2,335,538 - IAI46_11055 0.62 +0.8
Or see this region's nucleotide sequence