Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09600 and IAI46_09605 are separated by 258 nucleotides IAI46_09605 and IAI46_09610 overlap by 8 nucleotides
IAI46_09600: IAI46_09600 - glucans biosynthesis protein MdoC, at 2,036,525 to 2,037,655
_09600
IAI46_09605: IAI46_09605 - glucan biosynthesis protein G, at 2,037,914 to 2,039,482
_09605
IAI46_09610: IAI46_09610 - glucans biosynthesis glucosyltransferase MdoH, at 2,039,475 to 2,042,036
_09610
Position (kb)
2037
2038
2039
2040 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2036.991 kb on + strand, within IAI46_09600 at 2037.093 kb on + strand, within IAI46_09600 at 2037.263 kb on + strand, within IAI46_09600 at 2037.279 kb on + strand, within IAI46_09600 at 2037.306 kb on - strand, within IAI46_09600 at 2037.433 kb on - strand, within IAI46_09600 at 2037.551 kb on - strand at 2037.551 kb on - strand at 2037.551 kb on - strand at 2037.551 kb on - strand at 2037.603 kb on + strand at 2037.655 kb on + strand at 2037.655 kb on + strand at 2037.655 kb on + strand at 2037.655 kb on + strand at 2037.701 kb on + strand at 2037.701 kb on + strand at 2037.701 kb on + strand at 2037.702 kb on - strand at 2037.716 kb on + strand at 2037.735 kb on + strand at 2037.736 kb on - strand at 2037.736 kb on - strand at 2037.736 kb on - strand at 2037.738 kb on + strand at 2037.738 kb on + strand at 2037.738 kb on + strand at 2037.739 kb on - strand at 2037.807 kb on + strand at 2037.813 kb on - strand at 2037.841 kb on - strand at 2037.871 kb on + strand at 2037.875 kb on - strand at 2037.918 kb on + strand at 2037.919 kb on - strand at 2037.919 kb on - strand at 2037.923 kb on - strand at 2037.925 kb on + strand at 2037.927 kb on + strand at 2037.928 kb on - strand at 2037.957 kb on + strand at 2037.957 kb on + strand at 2037.966 kb on + strand at 2037.966 kb on + strand at 2038.020 kb on + strand at 2038.154 kb on + strand, within IAI46_09605 at 2038.155 kb on - strand, within IAI46_09605 at 2038.208 kb on + strand, within IAI46_09605 at 2038.208 kb on + strand, within IAI46_09605 at 2038.254 kb on + strand, within IAI46_09605 at 2038.391 kb on - strand, within IAI46_09605 at 2038.706 kb on + strand, within IAI46_09605 at 2038.780 kb on + strand, within IAI46_09605 at 2038.780 kb on + strand, within IAI46_09605 at 2038.822 kb on + strand, within IAI46_09605 at 2038.850 kb on + strand, within IAI46_09605 at 2038.898 kb on - strand, within IAI46_09605 at 2038.911 kb on - strand, within IAI46_09605 at 2039.094 kb on - strand, within IAI46_09605 at 2039.147 kb on + strand, within IAI46_09605 at 2039.466 kb on + strand at 2039.481 kb on - strand at 2039.481 kb on - strand at 2039.506 kb on - strand at 2039.630 kb on + strand at 2039.630 kb on + strand at 2039.631 kb on - strand at 2039.920 kb on - strand, within IAI46_09610 at 2039.967 kb on + strand, within IAI46_09610 at 2040.066 kb on + strand, within IAI46_09610 at 2040.066 kb on + strand, within IAI46_09610 at 2040.066 kb on + strand, within IAI46_09610 at 2040.066 kb on + strand, within IAI46_09610 at 2040.066 kb on + strand, within IAI46_09610 at 2040.067 kb on - strand, within IAI46_09610 at 2040.067 kb on - strand, within IAI46_09610 at 2040.067 kb on - strand, within IAI46_09610 at 2040.186 kb on - strand, within IAI46_09610 at 2040.186 kb on - strand, within IAI46_09610 at 2040.301 kb on - strand, within IAI46_09610 at 2040.338 kb on - strand, within IAI46_09610 at 2040.345 kb on + strand, within IAI46_09610 at 2040.346 kb on - strand, within IAI46_09610 at 2040.363 kb on + strand, within IAI46_09610 at 2040.363 kb on + strand, within IAI46_09610 at 2040.364 kb on - strand, within IAI46_09610 at 2040.364 kb on - strand, within IAI46_09610 at 2040.422 kb on - strand, within IAI46_09610
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,036,991 + IAI46_09600 0.41 +0.6 2,037,093 + IAI46_09600 0.50 -0.1 2,037,263 + IAI46_09600 0.65 -0.6 2,037,279 + IAI46_09600 0.67 +1.3 2,037,306 - IAI46_09600 0.69 -0.7 2,037,433 - IAI46_09600 0.80 -0.2 2,037,551 - -1.7 2,037,551 - -0.6 2,037,551 - -0.3 2,037,551 - +0.5 2,037,603 + +0.6 2,037,655 + +0.7 2,037,655 + +0.3 2,037,655 + +0.2 2,037,655 + -0.4 2,037,701 + -0.0 2,037,701 + -0.2 2,037,701 + -0.4 2,037,702 - -0.1 2,037,716 + -0.2 2,037,735 + +0.1 2,037,736 - +0.9 2,037,736 - +0.5 2,037,736 - -0.2 2,037,738 + +0.4 2,037,738 + -0.1 2,037,738 + +0.4 2,037,739 - +0.8 2,037,807 + -0.5 2,037,813 - +0.5 2,037,841 - -0.7 2,037,871 + +1.8 2,037,875 - -0.3 2,037,918 + -0.3 2,037,919 - -2.7 2,037,919 - +0.4 2,037,923 - -0.2 2,037,925 + +0.1 2,037,927 + -0.9 2,037,928 - -0.2 2,037,957 + +0.4 2,037,957 + -0.3 2,037,966 + -0.3 2,037,966 + -0.2 2,038,020 + -0.4 2,038,154 + IAI46_09605 0.15 +0.0 2,038,155 - IAI46_09605 0.15 +1.8 2,038,208 + IAI46_09605 0.19 +0.8 2,038,208 + IAI46_09605 0.19 -0.3 2,038,254 + IAI46_09605 0.22 -1.6 2,038,391 - IAI46_09605 0.30 +0.2 2,038,706 + IAI46_09605 0.50 +1.0 2,038,780 + IAI46_09605 0.55 +0.2 2,038,780 + IAI46_09605 0.55 -0.1 2,038,822 + IAI46_09605 0.58 -0.0 2,038,850 + IAI46_09605 0.60 +0.0 2,038,898 - IAI46_09605 0.63 +0.2 2,038,911 - IAI46_09605 0.64 +0.2 2,039,094 - IAI46_09605 0.75 -0.9 2,039,147 + IAI46_09605 0.79 +0.2 2,039,466 + -0.4 2,039,481 - +0.5 2,039,481 - -0.1 2,039,506 - -1.2 2,039,630 + -0.1 2,039,630 + +0.9 2,039,631 - +0.8 2,039,920 - IAI46_09610 0.17 -0.0 2,039,967 + IAI46_09610 0.19 +0.0 2,040,066 + IAI46_09610 0.23 -0.6 2,040,066 + IAI46_09610 0.23 +0.7 2,040,066 + IAI46_09610 0.23 +0.2 2,040,066 + IAI46_09610 0.23 -0.9 2,040,066 + IAI46_09610 0.23 -0.9 2,040,067 - IAI46_09610 0.23 +0.1 2,040,067 - IAI46_09610 0.23 -0.3 2,040,067 - IAI46_09610 0.23 -0.6 2,040,186 - IAI46_09610 0.28 +0.4 2,040,186 - IAI46_09610 0.28 +0.3 2,040,301 - IAI46_09610 0.32 +0.3 2,040,338 - IAI46_09610 0.34 -0.0 2,040,345 + IAI46_09610 0.34 -1.2 2,040,346 - IAI46_09610 0.34 -0.7 2,040,363 + IAI46_09610 0.35 +0.4 2,040,363 + IAI46_09610 0.35 +0.8 2,040,364 - IAI46_09610 0.35 -1.0 2,040,364 - IAI46_09610 0.35 +0.2 2,040,422 - IAI46_09610 0.37 -0.2
Or see this region's nucleotide sequence