Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09145 and IAI46_09150 are separated by 57 nucleotides IAI46_09150 and IAI46_09155 are separated by 207 nucleotides
IAI46_09145: IAI46_09145 - aldehyde dehydrogenase (NADP(+)), at 1,960,056 to 1,961,666
_09145
IAI46_09150: IAI46_09150 - dihydrodipicolinate synthase family protein, at 1,961,724 to 1,962,644
_09150
IAI46_09155: IAI46_09155 - AraC family transcriptional regulator, at 1,962,852 to 1,963,697
_09155
Position (kb)
1961
1962
1963 Strain fitness (log2 ratio)
-1
0
1
2 at 1961.483 kb on - strand, within IAI46_09145 at 1961.630 kb on + strand at 1961.631 kb on - strand at 1961.865 kb on + strand, within IAI46_09150 at 1961.930 kb on - strand, within IAI46_09150 at 1962.005 kb on + strand, within IAI46_09150 at 1962.159 kb on - strand, within IAI46_09150 at 1962.159 kb on - strand, within IAI46_09150 at 1962.209 kb on + strand, within IAI46_09150 at 1962.210 kb on - strand, within IAI46_09150 at 1962.230 kb on - strand, within IAI46_09150 at 1962.304 kb on + strand, within IAI46_09150 at 1962.305 kb on - strand, within IAI46_09150 at 1962.626 kb on + strand at 1962.644 kb on + strand at 1962.645 kb on - strand at 1962.645 kb on - strand at 1962.693 kb on + strand at 1962.718 kb on + strand at 1962.718 kb on + strand at 1962.718 kb on + strand at 1962.850 kb on + strand at 1963.058 kb on - strand, within IAI46_09155 at 1963.141 kb on + strand, within IAI46_09155 at 1963.141 kb on + strand, within IAI46_09155 at 1963.141 kb on + strand, within IAI46_09155 at 1963.168 kb on + strand, within IAI46_09155 at 1963.169 kb on - strand, within IAI46_09155 at 1963.247 kb on - strand, within IAI46_09155 at 1963.294 kb on + strand, within IAI46_09155 at 1963.294 kb on + strand, within IAI46_09155 at 1963.294 kb on + strand, within IAI46_09155 at 1963.295 kb on - strand, within IAI46_09155 at 1963.361 kb on + strand, within IAI46_09155 at 1963.362 kb on - strand, within IAI46_09155 at 1963.550 kb on + strand, within IAI46_09155 at 1963.550 kb on + strand, within IAI46_09155
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 1,961,483 - IAI46_09145 0.89 +0.0 1,961,630 + -0.3 1,961,631 - +0.6 1,961,865 + IAI46_09150 0.15 -0.2 1,961,930 - IAI46_09150 0.22 -0.5 1,962,005 + IAI46_09150 0.31 +0.5 1,962,159 - IAI46_09150 0.47 -0.3 1,962,159 - IAI46_09150 0.47 +0.6 1,962,209 + IAI46_09150 0.53 +0.1 1,962,210 - IAI46_09150 0.53 +0.4 1,962,230 - IAI46_09150 0.55 -0.1 1,962,304 + IAI46_09150 0.63 +0.2 1,962,305 - IAI46_09150 0.63 +0.0 1,962,626 + +0.5 1,962,644 + +1.1 1,962,645 - +0.1 1,962,645 - -0.4 1,962,693 + +1.1 1,962,718 + +0.8 1,962,718 + +1.5 1,962,718 + +0.4 1,962,850 + -0.8 1,963,058 - IAI46_09155 0.24 +1.4 1,963,141 + IAI46_09155 0.34 -0.6 1,963,141 + IAI46_09155 0.34 +0.6 1,963,141 + IAI46_09155 0.34 +0.1 1,963,168 + IAI46_09155 0.37 -0.4 1,963,169 - IAI46_09155 0.37 -0.2 1,963,247 - IAI46_09155 0.47 +0.3 1,963,294 + IAI46_09155 0.52 -1.5 1,963,294 + IAI46_09155 0.52 -1.1 1,963,294 + IAI46_09155 0.52 -0.5 1,963,295 - IAI46_09155 0.52 +0.4 1,963,361 + IAI46_09155 0.60 +0.5 1,963,362 - IAI46_09155 0.60 -0.6 1,963,550 + IAI46_09155 0.83 +2.1 1,963,550 + IAI46_09155 0.83 +0.4
Or see this region's nucleotide sequence