Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_06890 and IAI46_06895 are separated by 204 nucleotides IAI46_06895 and IAI46_06900 are separated by 53 nucleotides IAI46_06900 and IAI46_06905 are separated by 342 nucleotides
IAI46_06890: IAI46_06890 - N-acetyltransferase, at 1,460,493 to 1,460,963
_06890
IAI46_06895: IAI46_06895 - YIP1 family protein, at 1,461,168 to 1,461,758
_06895
IAI46_06900: IAI46_06900 - DMT family transporter, at 1,461,812 to 1,462,663
_06900
IAI46_06905: IAI46_06905 - sulfite reductase flavoprotein subunit alpha, at 1,463,006 to 1,464,547
_06905
Position (kb)
1461
1462
1463 Strain fitness (log2 ratio)
-1
0
1
2 at 1460.875 kb on + strand, within IAI46_06890 at 1460.882 kb on + strand, within IAI46_06890 at 1460.883 kb on - strand, within IAI46_06890 at 1460.883 kb on - strand, within IAI46_06890 at 1460.999 kb on + strand at 1461.055 kb on + strand at 1461.055 kb on + strand at 1461.059 kb on + strand at 1461.059 kb on + strand at 1461.060 kb on - strand at 1461.060 kb on - strand at 1461.060 kb on - strand at 1461.060 kb on - strand at 1461.060 kb on - strand at 1461.121 kb on + strand at 1461.174 kb on - strand at 1461.224 kb on + strand at 1461.255 kb on + strand, within IAI46_06895 at 1461.255 kb on + strand, within IAI46_06895 at 1461.256 kb on - strand, within IAI46_06895 at 1461.363 kb on - strand, within IAI46_06895 at 1461.378 kb on + strand, within IAI46_06895 at 1461.378 kb on + strand, within IAI46_06895 at 1461.380 kb on + strand, within IAI46_06895 at 1461.397 kb on - strand, within IAI46_06895 at 1461.418 kb on + strand, within IAI46_06895 at 1461.418 kb on + strand, within IAI46_06895 at 1461.419 kb on - strand, within IAI46_06895 at 1461.419 kb on - strand, within IAI46_06895 at 1461.419 kb on - strand, within IAI46_06895 at 1461.422 kb on + strand, within IAI46_06895 at 1461.423 kb on - strand, within IAI46_06895 at 1461.423 kb on - strand, within IAI46_06895 at 1461.423 kb on - strand, within IAI46_06895 at 1461.423 kb on - strand, within IAI46_06895 at 1461.544 kb on + strand, within IAI46_06895 at 1461.544 kb on + strand, within IAI46_06895 at 1461.545 kb on - strand, within IAI46_06895 at 1461.545 kb on - strand, within IAI46_06895 at 1461.594 kb on + strand, within IAI46_06895 at 1461.595 kb on - strand, within IAI46_06895 at 1461.647 kb on + strand, within IAI46_06895 at 1461.647 kb on + strand, within IAI46_06895 at 1461.647 kb on + strand, within IAI46_06895 at 1461.648 kb on - strand, within IAI46_06895 at 1461.809 kb on + strand at 1461.810 kb on - strand at 1461.936 kb on + strand, within IAI46_06900 at 1462.093 kb on + strand, within IAI46_06900 at 1462.093 kb on + strand, within IAI46_06900 at 1462.214 kb on - strand, within IAI46_06900 at 1462.251 kb on + strand, within IAI46_06900 at 1462.252 kb on - strand, within IAI46_06900 at 1462.252 kb on - strand, within IAI46_06900 at 1462.407 kb on + strand, within IAI46_06900 at 1462.407 kb on + strand, within IAI46_06900 at 1462.619 kb on + strand at 1462.715 kb on - strand at 1462.715 kb on - strand at 1462.915 kb on + strand at 1462.953 kb on - strand at 1463.011 kb on - strand at 1463.128 kb on - strand at 1463.128 kb on - strand at 1463.148 kb on + strand at 1463.149 kb on - strand at 1463.217 kb on + strand, within IAI46_06905 at 1463.218 kb on - strand, within IAI46_06905 at 1463.220 kb on + strand, within IAI46_06905 at 1463.220 kb on + strand, within IAI46_06905 at 1463.221 kb on - strand, within IAI46_06905 at 1463.267 kb on + strand, within IAI46_06905 at 1463.306 kb on + strand, within IAI46_06905 at 1463.306 kb on + strand, within IAI46_06905 at 1463.306 kb on + strand, within IAI46_06905 at 1463.306 kb on + strand, within IAI46_06905 at 1463.307 kb on - strand, within IAI46_06905 at 1463.307 kb on - strand, within IAI46_06905 at 1463.393 kb on + strand, within IAI46_06905 at 1463.393 kb on + strand, within IAI46_06905 at 1463.394 kb on - strand, within IAI46_06905 at 1463.461 kb on - strand, within IAI46_06905 at 1463.559 kb on + strand, within IAI46_06905
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 1,460,875 + IAI46_06890 0.81 -0.1 1,460,882 + IAI46_06890 0.83 +0.4 1,460,883 - IAI46_06890 0.83 -0.3 1,460,883 - IAI46_06890 0.83 -0.0 1,460,999 + +0.6 1,461,055 + +0.4 1,461,055 + +0.4 1,461,059 + +0.5 1,461,059 + +0.6 1,461,060 - +0.6 1,461,060 - +0.3 1,461,060 - -0.9 1,461,060 - +0.2 1,461,060 - -0.3 1,461,121 + -0.5 1,461,174 - -0.2 1,461,224 + +0.5 1,461,255 + IAI46_06895 0.15 +1.4 1,461,255 + IAI46_06895 0.15 -0.3 1,461,256 - IAI46_06895 0.15 -0.3 1,461,363 - IAI46_06895 0.33 +1.4 1,461,378 + IAI46_06895 0.36 +0.8 1,461,378 + IAI46_06895 0.36 +1.4 1,461,380 + IAI46_06895 0.36 +0.9 1,461,397 - IAI46_06895 0.39 -0.3 1,461,418 + IAI46_06895 0.42 +1.2 1,461,418 + IAI46_06895 0.42 -0.0 1,461,419 - IAI46_06895 0.42 -0.3 1,461,419 - IAI46_06895 0.42 -0.4 1,461,419 - IAI46_06895 0.42 -0.3 1,461,422 + IAI46_06895 0.43 +0.7 1,461,423 - IAI46_06895 0.43 -0.4 1,461,423 - IAI46_06895 0.43 -0.2 1,461,423 - IAI46_06895 0.43 +0.1 1,461,423 - IAI46_06895 0.43 -0.7 1,461,544 + IAI46_06895 0.64 +1.5 1,461,544 + IAI46_06895 0.64 +0.2 1,461,545 - IAI46_06895 0.64 +0.4 1,461,545 - IAI46_06895 0.64 +0.5 1,461,594 + IAI46_06895 0.72 +1.0 1,461,595 - IAI46_06895 0.72 +1.5 1,461,647 + IAI46_06895 0.81 -0.1 1,461,647 + IAI46_06895 0.81 -1.0 1,461,647 + IAI46_06895 0.81 +0.8 1,461,648 - IAI46_06895 0.81 +0.6 1,461,809 + +0.6 1,461,810 - +0.8 1,461,936 + IAI46_06900 0.15 +0.3 1,462,093 + IAI46_06900 0.33 -1.0 1,462,093 + IAI46_06900 0.33 +0.6 1,462,214 - IAI46_06900 0.47 -0.1 1,462,251 + IAI46_06900 0.52 -0.1 1,462,252 - IAI46_06900 0.52 -0.2 1,462,252 - IAI46_06900 0.52 +0.4 1,462,407 + IAI46_06900 0.70 +0.2 1,462,407 + IAI46_06900 0.70 +0.1 1,462,619 + +2.1 1,462,715 - +0.0 1,462,715 - -0.3 1,462,915 + -0.1 1,462,953 - -0.3 1,463,011 - +0.4 1,463,128 - -0.1 1,463,128 - +1.1 1,463,148 + +0.5 1,463,149 - +0.3 1,463,217 + IAI46_06905 0.14 +0.6 1,463,218 - IAI46_06905 0.14 +0.8 1,463,220 + IAI46_06905 0.14 -0.6 1,463,220 + IAI46_06905 0.14 -0.6 1,463,221 - IAI46_06905 0.14 +0.2 1,463,267 + IAI46_06905 0.17 +0.2 1,463,306 + IAI46_06905 0.19 -0.1 1,463,306 + IAI46_06905 0.19 +0.6 1,463,306 + IAI46_06905 0.19 -0.6 1,463,306 + IAI46_06905 0.19 +0.7 1,463,307 - IAI46_06905 0.20 -0.1 1,463,307 - IAI46_06905 0.20 -0.3 1,463,393 + IAI46_06905 0.25 +0.1 1,463,393 + IAI46_06905 0.25 +0.4 1,463,394 - IAI46_06905 0.25 +0.6 1,463,461 - IAI46_06905 0.30 +0.1 1,463,559 + IAI46_06905 0.36 -1.4
Or see this region's nucleotide sequence