Strain Fitness in Serratia liquefaciens MT49 around IAI46_05070

Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Manganese (II) chloride tetrahydrate 50 uM, aerobic
1,092,365	+		IAI46_05060	0.72	+0.1
1,092,365	+		IAI46_05060	0.72	+0.7
1,092,395	-		IAI46_05060	0.75	-0.4
1,092,413	+		IAI46_05060	0.76	+0.0
1,092,413	+		IAI46_05060	0.76	+0.4
1,092,413	+		IAI46_05060	0.76	+0.1
1,092,413	+		IAI46_05060	0.76	+0.0
1,092,414	-		IAI46_05060	0.76	+0.4
1,092,414	-		IAI46_05060	0.76	+1.1
1,092,416	+		IAI46_05060	0.77	-1.2
1,092,417	-		IAI46_05060	0.77	+0.4
1,092,544	+		IAI46_05060	0.89	+0.4
1,092,633	-				+0.7
1,092,637	+				+1.3
1,092,642	+				-1.0
1,092,685	-				-0.1
1,092,695	+				+0.8
1,092,695	+				-0.2
1,092,695	+				-0.5
1,092,695	+				-1.0
1,092,696	-				-0.7
1,092,696	-				+2.3
1,092,698	+				+0.6
1,092,699	-				+0.3
1,092,699	-				+0.9
1,092,700	+				+1.4
1,092,700	+				+0.8
1,092,701	-				+0.5
1,092,782	-				+0.2
1,092,782	-				+2.0
1,092,786	+				+0.3
1,092,802	+				+1.1
1,092,803	-				-0.1
1,092,920	+		IAI46_05065	0.30	-0.6
1,092,920	+		IAI46_05065	0.30	+0.1
1,092,920	+		IAI46_05065	0.30	-0.2
1,092,920	+		IAI46_05065	0.30	+0.6
1,092,920	+		IAI46_05065	0.30	+0.3
1,092,921	-		IAI46_05065	0.30	-1.7
1,092,922	+		IAI46_05065	0.30	-0.1
1,093,019	+		IAI46_05065	0.51	-0.1
1,093,020	-		IAI46_05065	0.52	+0.0
1,093,088	+		IAI46_05065	0.66	-0.9
1,093,121	-		IAI46_05065	0.73	-0.2
1,093,130	+		IAI46_05065	0.75	+0.0
1,093,131	-		IAI46_05065	0.76	+0.6
1,093,131	-		IAI46_05065	0.76	-0.3
1,093,142	+		IAI46_05065	0.78	-0.2
1,093,164	+		IAI46_05065	0.83	+1.2
1,093,165	-		IAI46_05065	0.83	+1.5
1,093,214	+				+0.2
1,093,266	+				-0.2
1,093,266	+				+0.2
1,093,267	-				+1.2
1,093,275	+				+0.6
1,093,275	+				-0.9
1,093,280	+				+0.6
1,093,280	+				+0.7
1,093,281	-				-0.9
1,093,311	+				-1.2
1,093,312	-				+0.5
1,093,314	+				-0.1
1,093,314	+				+0.3
1,093,315	-				-0.2
1,093,320	+				-0.1
1,093,320	+				+0.1
1,093,333	-				+0.0
1,093,333	-				+0.7
1,093,348	+				-0.5
1,093,349	-				+0.2
1,093,349	-				+1.7
1,093,475	+				-0.4
1,093,475	+				+0.4
1,093,476	-				+0.5
1,093,551	+		IAI46_05070	0.12	+0.4
1,093,551	+		IAI46_05070	0.12	-0.1
1,093,551	+		IAI46_05070	0.12	-1.0
1,093,551	+		IAI46_05070	0.12	-1.5
1,093,552	-		IAI46_05070	0.12	+0.6
1,093,563	+		IAI46_05070	0.12	+0.4
1,093,567	+		IAI46_05070	0.13	-0.4
1,093,567	+		IAI46_05070	0.13	+0.2
1,093,597	-		IAI46_05070	0.14	+1.6
1,093,597	-		IAI46_05070	0.14	+1.3
1,093,597	-		IAI46_05070	0.14	-0.3
1,093,662	+		IAI46_05070	0.18	+0.5
1,093,663	-		IAI46_05070	0.18	+1.5
1,093,841	+		IAI46_05070	0.28	-0.2
1,093,842	-		IAI46_05070	0.28	+0.2
1,093,898	+		IAI46_05070	0.31	+1.2
1,093,898	+		IAI46_05070	0.31	+0.4
1,093,899	-		IAI46_05070	0.31	+0.6
1,093,971	-		IAI46_05070	0.35	-0.4
1,094,042	+		IAI46_05070	0.39	-0.3
1,094,050	+		IAI46_05070	0.40	+0.4
1,094,060	-		IAI46_05070	0.40	+0.9
1,094,085	+		IAI46_05070	0.42	+0.3
1,094,187	+		IAI46_05070	0.48	+0.4
1,094,188	-		IAI46_05070	0.48	+0.1
1,094,262	+		IAI46_05070	0.52	+0.2
1,094,263	-		IAI46_05070	0.52	-1.0
1,094,263	-		IAI46_05070	0.52	-1.9
1,094,316	+		IAI46_05070	0.55	+0.7
1,094,463	-		IAI46_05070	0.63	-0.5
1,094,463	-		IAI46_05070	0.63	-1.1
1,094,473	+		IAI46_05070	0.64	-0.2
1,094,474	-		IAI46_05070	0.64	-0.8
1,094,519	+		IAI46_05070	0.66	+0.2
1,094,519	+		IAI46_05070	0.66	-0.0
1,094,519	+		IAI46_05070	0.66	-1.2
1,094,519	+		IAI46_05070	0.66	-1.5
1,094,524	-		IAI46_05070	0.67	+0.1
1,094,524	-		IAI46_05070	0.67	-0.0
1,094,627	+		IAI46_05070	0.72	+0.5
1,094,627	+		IAI46_05070	0.72	+1.0
1,094,628	-		IAI46_05070	0.72	-0.5
1,094,628	-		IAI46_05070	0.72	+0.5
1,094,705	+		IAI46_05070	0.77	-1.3
1,094,705	+		IAI46_05070	0.77	+1.6
1,094,705	+		IAI46_05070	0.77	-2.0
1,094,725	-		IAI46_05070	0.78	+1.3
1,094,725	-		IAI46_05070	0.78	+0.2
1,094,780	+		IAI46_05070	0.81	-0.3
1,094,780	+		IAI46_05070	0.81	-0.3
1,094,780	+		IAI46_05070	0.81	-1.0
1,094,781	-		IAI46_05070	0.81	+1.6
1,094,781	-		IAI46_05070	0.81	+0.5
1,094,781	-		IAI46_05070	0.81	-0.4
1,094,781	-		IAI46_05070	0.81	+0.8
1,094,848	+		IAI46_05070	0.85	-0.2
1,094,916	-		IAI46_05070	0.89	+0.8
1,094,916	-		IAI46_05070	0.89	+0.5
1,094,916	-		IAI46_05070	0.89	-0.3
1,094,968	+				+0.0
1,094,969	-				+0.1
1,095,038	+				+0.5
1,095,039	-				-0.2
1,095,039	-				-0.2
1,095,039	-				+0.8
1,095,042	+				+0.9
1,095,042	+				-0.1
1,095,042	+				-0.1
1,095,043	-				+0.9
1,095,043	-				+0.4
1,095,043	-				-0.1
1,095,048	+				-0.0
1,095,100	+				-0.8
1,095,100	+				-0.0
1,095,115	-				-0.2
1,095,115	-				+0.8
1,095,115	-				+0.5
1,095,158	-				+0.0
1,095,261	+				-0.3
1,095,265	+				+0.1
1,095,265	+				+0.5
1,095,265	+				+0.3
1,095,265	+				+1.2
1,095,265	+				+0.9
1,095,265	+				-0.5
1,095,265	+				-0.5
1,095,266	-				+0.2
1,095,266	-				-0.2
1,095,266	-				+0.2
1,095,266	-				-0.5
1,095,266	-				+0.5
1,095,266	-				+0.7
1,095,321	+		IAI46_05075	0.12	-0.7
1,095,321	+		IAI46_05075	0.12	+1.0
1,095,322	-		IAI46_05075	0.12	+0.9
1,095,523	+		IAI46_05075	0.23	+0.3
1,095,533	+		IAI46_05075	0.24	+0.8
1,095,534	-		IAI46_05075	0.24	-0.6
1,095,661	+		IAI46_05075	0.31	+0.3
1,095,662	-		IAI46_05075	0.31	-1.1
1,095,662	-		IAI46_05075	0.31	-0.4
1,095,662	-		IAI46_05075	0.31	+1.3
1,095,667	+		IAI46_05075	0.31	+1.0
1,095,668	-		IAI46_05075	0.31	+1.4
1,095,668	-		IAI46_05075	0.31	+0.0
1,095,668	-		IAI46_05075	0.31	-0.1
1,095,668	-		IAI46_05075	0.31	-1.5
1,095,671	-		IAI46_05075	0.32	-0.3
1,095,703	+		IAI46_05075	0.33	-0.4
1,095,703	+		IAI46_05075	0.33	+0.2
1,095,704	-		IAI46_05075	0.33	-0.1
1,095,831	+		IAI46_05075	0.41	-1.3
1,095,961	+		IAI46_05075	0.48	+0.5
1,095,962	-		IAI46_05075	0.48	-0.7
1,095,976	+		IAI46_05075	0.49	+0.4
1,095,977	-		IAI46_05075	0.49	+0.3
1,095,977	-		IAI46_05075	0.49	+0.1
1,096,060	-		IAI46_05075	0.53	+0.7
1,096,093	+		IAI46_05075	0.55	+0.2
1,096,093	+		IAI46_05075	0.55	-0.2
1,096,094	-		IAI46_05075	0.55	+0.9
1,096,094	-		IAI46_05075	0.55	+1.0
1,096,094	-		IAI46_05075	0.55	-0.4
1,096,094	-		IAI46_05075	0.55	+0.7
1,096,094	-		IAI46_05075	0.55	-1.1