Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_02140 and IAI46_02145 are separated by 104 nucleotides IAI46_02145 and IAI46_02150 are separated by 29 nucleotides IAI46_02150 and IAI46_02155 are separated by 56 nucleotides
IAI46_02140: IAI46_02140 - LysR family transcriptional regulator, at 453,666 to 454,574
_02140
IAI46_02145: IAI46_02145 - NAD(P)H-dependent oxidoreductase, at 454,679 to 455,203
_02145
IAI46_02150: IAI46_02150 - alpha,alpha-phosphotrehalase, at 455,233 to 456,897
_02150
IAI46_02155: IAI46_02155 - PTS trehalose transporter subunit IIBC, at 456,954 to 458,369
_02155
Position (kb) 455
456
457 Strain fitness (log2 ratio) -2
-1
0
1
2 at 454.376 kb on + strand, within IAI46_02140 at 454.377 kb on - strand, within IAI46_02140 at 454.409 kb on + strand, within IAI46_02140 at 454.409 kb on + strand, within IAI46_02140 at 454.410 kb on - strand, within IAI46_02140 at 454.515 kb on + strand at 454.515 kb on + strand at 454.574 kb on + strand at 454.574 kb on + strand at 454.574 kb on + strand at 454.575 kb on - strand at 454.575 kb on - strand at 454.620 kb on + strand at 454.620 kb on + strand at 454.620 kb on + strand at 454.809 kb on - strand, within IAI46_02145 at 454.881 kb on - strand, within IAI46_02145 at 454.881 kb on - strand, within IAI46_02145 at 454.886 kb on + strand, within IAI46_02145 at 454.930 kb on - strand, within IAI46_02145 at 455.021 kb on + strand, within IAI46_02145 at 455.021 kb on + strand, within IAI46_02145 at 455.024 kb on - strand, within IAI46_02145 at 455.024 kb on - strand, within IAI46_02145 at 455.036 kb on + strand, within IAI46_02145 at 455.037 kb on - strand, within IAI46_02145 at 455.037 kb on - strand, within IAI46_02145 at 455.037 kb on - strand, within IAI46_02145 at 455.039 kb on - strand, within IAI46_02145 at 455.105 kb on + strand, within IAI46_02145 at 455.105 kb on + strand, within IAI46_02145 at 455.106 kb on - strand, within IAI46_02145 at 455.141 kb on - strand, within IAI46_02145 at 455.234 kb on + strand at 455.235 kb on - strand at 455.242 kb on + strand at 455.243 kb on - strand at 456.705 kb on - strand, within IAI46_02150 at 456.731 kb on + strand at 456.733 kb on + strand at 456.734 kb on - strand at 456.897 kb on + strand at 456.898 kb on - strand at 456.904 kb on - strand at 456.904 kb on - strand at 456.910 kb on - strand at 456.991 kb on + strand at 456.991 kb on + strand at 456.992 kb on - strand at 456.992 kb on - strand at 457.049 kb on - strand at 457.189 kb on + strand, within IAI46_02155 at 457.207 kb on + strand, within IAI46_02155 at 457.436 kb on - strand, within IAI46_02155 at 457.590 kb on + strand, within IAI46_02155 at 457.590 kb on + strand, within IAI46_02155 at 457.591 kb on - strand, within IAI46_02155 at 457.600 kb on + strand, within IAI46_02155 at 457.600 kb on + strand, within IAI46_02155 at 457.600 kb on + strand, within IAI46_02155 at 457.601 kb on - strand, within IAI46_02155 at 457.606 kb on + strand, within IAI46_02155 at 457.606 kb on + strand, within IAI46_02155 at 457.606 kb on + strand, within IAI46_02155 at 457.607 kb on - strand, within IAI46_02155 at 457.757 kb on - strand, within IAI46_02155
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 454,376 + IAI46_02140 0.78 -0.7 454,377 - IAI46_02140 0.78 -1.1 454,409 + IAI46_02140 0.82 +1.0 454,409 + IAI46_02140 0.82 +0.8 454,410 - IAI46_02140 0.82 -0.1 454,515 + +0.1 454,515 + -0.8 454,574 + +0.2 454,574 + -0.5 454,574 + +0.5 454,575 - +0.0 454,575 - -0.3 454,620 + -1.3 454,620 + -0.9 454,620 + -0.3 454,809 - IAI46_02145 0.25 +0.8 454,881 - IAI46_02145 0.38 -0.7 454,881 - IAI46_02145 0.38 +0.4 454,886 + IAI46_02145 0.39 +0.7 454,930 - IAI46_02145 0.48 -0.2 455,021 + IAI46_02145 0.65 +0.4 455,021 + IAI46_02145 0.65 +0.9 455,024 - IAI46_02145 0.66 -0.2 455,024 - IAI46_02145 0.66 -1.9 455,036 + IAI46_02145 0.68 -0.4 455,037 - IAI46_02145 0.68 +0.6 455,037 - IAI46_02145 0.68 +0.7 455,037 - IAI46_02145 0.68 +1.1 455,039 - IAI46_02145 0.69 +0.5 455,105 + IAI46_02145 0.81 +0.8 455,105 + IAI46_02145 0.81 -0.3 455,106 - IAI46_02145 0.81 +0.9 455,141 - IAI46_02145 0.88 +0.8 455,234 + -0.2 455,235 - +1.8 455,242 + +0.2 455,243 - +0.2 456,705 - IAI46_02150 0.88 -0.4 456,731 + -1.3 456,733 + +1.1 456,734 - +0.8 456,897 + -0.2 456,898 - -0.2 456,904 - -0.7 456,904 - -0.4 456,910 - -0.4 456,991 + -0.0 456,991 + +1.1 456,992 - -0.2 456,992 - -0.0 457,049 - -0.2 457,189 + IAI46_02155 0.17 +0.1 457,207 + IAI46_02155 0.18 +0.9 457,436 - IAI46_02155 0.34 +0.6 457,590 + IAI46_02155 0.45 +0.5 457,590 + IAI46_02155 0.45 -0.2 457,591 - IAI46_02155 0.45 -0.6 457,600 + IAI46_02155 0.46 -0.6 457,600 + IAI46_02155 0.46 -0.5 457,600 + IAI46_02155 0.46 +0.6 457,601 - IAI46_02155 0.46 +1.0 457,606 + IAI46_02155 0.46 -0.1 457,606 + IAI46_02155 0.46 +0.9 457,606 + IAI46_02155 0.46 +1.7 457,607 - IAI46_02155 0.46 +0.0 457,757 - IAI46_02155 0.57 +0.2
Or see this region's nucleotide sequence