Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_01075 and IAI46_01080 are separated by 80 nucleotides IAI46_01080 and IAI46_01085 are separated by 3 nucleotides IAI46_01085 and IAI46_01090 are separated by 3 nucleotides IAI46_01090 and IAI46_01095 are separated by 51 nucleotides IAI46_01095 and IAI46_01100 are separated by 14 nucleotides
IAI46_01075: IAI46_01075 - ubiquinone biosynthesis regulatory protein kinase UbiB, at 239,392 to 241,023
_01075
IAI46_01080: IAI46_01080 - Sec-independent protein translocase subunit TatA, at 241,104 to 241,367
_01080
IAI46_01085: IAI46_01085 - Sec-independent protein translocase subunit TatB, at 241,371 to 241,937
_01085
IAI46_01090: IAI46_01090 - Sec-independent protein translocase subunit TatC, at 241,941 to 242,711
_01090
IAI46_01095: IAI46_01095 - 3'-5' ssDNA/RNA exonuclease TatD, at 242,763 to 243,545
_01095
IAI46_01100: IAI46_01100 - porphobilinogen synthase, at 243,560 to 244,582
_01100
Position (kb) 241
242
243 Strain fitness (log2 ratio) -1
0
1
2 at 241.054 kb on + strand at 241.057 kb on - strand at 241.096 kb on + strand at 241.096 kb on + strand at 241.096 kb on + strand at 241.096 kb on + strand at 241.097 kb on - strand at 241.097 kb on - strand at 241.115 kb on + strand at 241.118 kb on + strand at 241.118 kb on + strand at 241.118 kb on + strand at 241.119 kb on - strand at 241.119 kb on - strand at 241.122 kb on - strand at 241.122 kb on - strand at 241.310 kb on + strand, within IAI46_01080 at 241.365 kb on + strand at 241.366 kb on - strand at 241.389 kb on - strand at 241.426 kb on + strand at 241.426 kb on + strand at 241.456 kb on + strand, within IAI46_01085 at 241.456 kb on + strand, within IAI46_01085 at 241.568 kb on - strand, within IAI46_01085 at 241.656 kb on + strand, within IAI46_01085 at 241.768 kb on + strand, within IAI46_01085 at 241.768 kb on + strand, within IAI46_01085 at 241.769 kb on - strand, within IAI46_01085 at 241.804 kb on + strand, within IAI46_01085 at 241.922 kb on + strand at 241.922 kb on + strand at 241.935 kb on + strand at 241.935 kb on + strand at 241.955 kb on + strand at 241.956 kb on - strand at 241.981 kb on + strand at 241.981 kb on + strand at 241.981 kb on + strand at 241.981 kb on + strand at 241.982 kb on - strand at 241.983 kb on + strand at 242.003 kb on - strand at 242.009 kb on + strand at 242.012 kb on + strand at 242.013 kb on - strand at 242.013 kb on - strand at 242.020 kb on + strand, within IAI46_01090 at 242.020 kb on + strand, within IAI46_01090 at 242.060 kb on + strand, within IAI46_01090 at 242.061 kb on - strand, within IAI46_01090 at 242.061 kb on - strand, within IAI46_01090 at 242.064 kb on + strand, within IAI46_01090 at 242.148 kb on - strand, within IAI46_01090 at 242.206 kb on - strand, within IAI46_01090 at 242.238 kb on + strand, within IAI46_01090 at 242.238 kb on + strand, within IAI46_01090 at 242.239 kb on - strand, within IAI46_01090 at 242.239 kb on - strand, within IAI46_01090 at 242.239 kb on - strand, within IAI46_01090 at 242.239 kb on - strand, within IAI46_01090 at 242.240 kb on + strand, within IAI46_01090 at 242.241 kb on - strand, within IAI46_01090 at 242.269 kb on + strand, within IAI46_01090 at 242.270 kb on - strand, within IAI46_01090 at 242.295 kb on + strand, within IAI46_01090 at 242.316 kb on + strand, within IAI46_01090 at 242.317 kb on - strand, within IAI46_01090 at 242.317 kb on - strand, within IAI46_01090 at 242.321 kb on + strand, within IAI46_01090 at 242.396 kb on + strand, within IAI46_01090 at 242.396 kb on + strand, within IAI46_01090 at 242.396 kb on + strand, within IAI46_01090 at 242.396 kb on + strand, within IAI46_01090 at 242.397 kb on - strand, within IAI46_01090 at 242.397 kb on - strand, within IAI46_01090 at 242.397 kb on - strand, within IAI46_01090 at 242.397 kb on - strand, within IAI46_01090 at 242.400 kb on + strand, within IAI46_01090 at 242.401 kb on - strand, within IAI46_01090 at 242.426 kb on + strand, within IAI46_01090 at 242.427 kb on - strand, within IAI46_01090 at 242.466 kb on - strand, within IAI46_01090 at 242.524 kb on - strand, within IAI46_01090 at 242.524 kb on - strand, within IAI46_01090 at 242.607 kb on + strand, within IAI46_01090 at 242.607 kb on + strand, within IAI46_01090 at 242.608 kb on - strand, within IAI46_01090 at 242.608 kb on - strand, within IAI46_01090 at 242.646 kb on + strand at 242.646 kb on + strand at 242.647 kb on - strand at 242.681 kb on - strand at 242.710 kb on - strand at 242.779 kb on + strand at 243.025 kb on + strand, within IAI46_01095 at 243.025 kb on + strand, within IAI46_01095 at 243.032 kb on - strand, within IAI46_01095 at 243.247 kb on + strand, within IAI46_01095 at 243.382 kb on - strand, within IAI46_01095 at 243.449 kb on + strand, within IAI46_01095 at 243.468 kb on - strand at 243.530 kb on - strand at 243.548 kb on + strand at 243.548 kb on + strand at 243.549 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 241,054 + -0.7 241,057 - +0.4 241,096 + +0.2 241,096 + +0.6 241,096 + -0.3 241,096 + +0.4 241,097 - -0.2 241,097 - +0.8 241,115 + +0.2 241,118 + -0.2 241,118 + +0.3 241,118 + +0.4 241,119 - +1.1 241,119 - -0.1 241,122 - +0.4 241,122 - +0.8 241,310 + IAI46_01080 0.78 +0.3 241,365 + -0.1 241,366 - +0.1 241,389 - +0.9 241,426 + +0.5 241,426 + +0.4 241,456 + IAI46_01085 0.15 -0.0 241,456 + IAI46_01085 0.15 +0.6 241,568 - IAI46_01085 0.35 +0.4 241,656 + IAI46_01085 0.50 -1.2 241,768 + IAI46_01085 0.70 +1.0 241,768 + IAI46_01085 0.70 -0.7 241,769 - IAI46_01085 0.70 -0.2 241,804 + IAI46_01085 0.76 +0.7 241,922 + -0.3 241,922 + +2.0 241,935 + -0.0 241,935 + +0.1 241,955 + +0.2 241,956 - +0.2 241,981 + +0.3 241,981 + +0.7 241,981 + +0.7 241,981 + +1.5 241,982 - +0.3 241,983 + -0.1 242,003 - -0.1 242,009 + -1.7 242,012 + +1.0 242,013 - -0.4 242,013 - +0.2 242,020 + IAI46_01090 0.10 +0.3 242,020 + IAI46_01090 0.10 +0.0 242,060 + IAI46_01090 0.15 +0.4 242,061 - IAI46_01090 0.16 +0.4 242,061 - IAI46_01090 0.16 +1.5 242,064 + IAI46_01090 0.16 +0.4 242,148 - IAI46_01090 0.27 +0.3 242,206 - IAI46_01090 0.34 +1.1 242,238 + IAI46_01090 0.39 +0.0 242,238 + IAI46_01090 0.39 -0.1 242,239 - IAI46_01090 0.39 +1.0 242,239 - IAI46_01090 0.39 -1.5 242,239 - IAI46_01090 0.39 -0.9 242,239 - IAI46_01090 0.39 +0.2 242,240 + IAI46_01090 0.39 +0.1 242,241 - IAI46_01090 0.39 +1.2 242,269 + IAI46_01090 0.43 +0.2 242,270 - IAI46_01090 0.43 -1.3 242,295 + IAI46_01090 0.46 +0.0 242,316 + IAI46_01090 0.49 +0.6 242,317 - IAI46_01090 0.49 +0.8 242,317 - IAI46_01090 0.49 +0.6 242,321 + IAI46_01090 0.49 +0.4 242,396 + IAI46_01090 0.59 +0.2 242,396 + IAI46_01090 0.59 -0.2 242,396 + IAI46_01090 0.59 +0.6 242,396 + IAI46_01090 0.59 +0.1 242,397 - IAI46_01090 0.59 +0.5 242,397 - IAI46_01090 0.59 +0.6 242,397 - IAI46_01090 0.59 -0.5 242,397 - IAI46_01090 0.59 +1.2 242,400 + IAI46_01090 0.60 -0.1 242,401 - IAI46_01090 0.60 +0.4 242,426 + IAI46_01090 0.63 +0.6 242,427 - IAI46_01090 0.63 +0.9 242,466 - IAI46_01090 0.68 -0.1 242,524 - IAI46_01090 0.76 +0.8 242,524 - IAI46_01090 0.76 -0.1 242,607 + IAI46_01090 0.86 -0.2 242,607 + IAI46_01090 0.86 +0.0 242,608 - IAI46_01090 0.87 +0.6 242,608 - IAI46_01090 0.87 -0.2 242,646 + -0.2 242,646 + +0.4 242,647 - +0.8 242,681 - +1.4 242,710 - +0.2 242,779 + +1.6 243,025 + IAI46_01095 0.33 -0.4 243,025 + IAI46_01095 0.33 -0.3 243,032 - IAI46_01095 0.34 +0.9 243,247 + IAI46_01095 0.62 +0.5 243,382 - IAI46_01095 0.79 -0.0 243,449 + IAI46_01095 0.88 +1.3 243,468 - +0.7 243,530 - -1.2 243,548 + +0.0 243,548 + +1.0 243,549 - +1.3
Or see this region's nucleotide sequence