Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18510 and CA264_18515 are separated by 1 nucleotides CA264_18515 and CA264_18520 are separated by 334 nucleotides CA264_18520 and CA264_18525 are separated by 62 nucleotides
CA264_18510: CA264_18510 - hypothetical protein, at 4,306,446 to 4,307,192
_18510
CA264_18515: CA264_18515 - GntR family transcriptional regulator, at 4,307,194 to 4,307,565
_18515
CA264_18520: CA264_18520 - hypothetical protein, at 4,307,900 to 4,308,688
_18520
CA264_18525: CA264_18525 - hypothetical protein, at 4,308,751 to 4,309,296
_18525
Position (kb)
4307
4308
4309 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4306.982 kb on - strand, within CA264_18510 at 4307.006 kb on + strand, within CA264_18510 at 4307.054 kb on + strand, within CA264_18510 at 4307.174 kb on + strand at 4307.190 kb on + strand at 4307.191 kb on - strand at 4307.219 kb on + strand at 4307.220 kb on - strand at 4307.220 kb on - strand at 4307.221 kb on + strand at 4307.222 kb on - strand at 4307.222 kb on - strand at 4307.222 kb on - strand at 4307.226 kb on - strand at 4307.256 kb on - strand, within CA264_18515 at 4307.356 kb on + strand, within CA264_18515 at 4307.357 kb on - strand, within CA264_18515 at 4307.380 kb on + strand, within CA264_18515 at 4307.401 kb on + strand, within CA264_18515 at 4307.531 kb on - strand at 4307.563 kb on + strand at 4307.592 kb on + strand at 4307.592 kb on + strand at 4307.603 kb on + strand at 4307.607 kb on + strand at 4307.608 kb on - strand at 4307.653 kb on - strand at 4307.677 kb on + strand at 4307.677 kb on + strand at 4307.863 kb on + strand at 4307.894 kb on + strand at 4307.895 kb on - strand at 4307.895 kb on - strand at 4307.899 kb on + strand at 4307.900 kb on - strand at 4307.900 kb on - strand at 4307.900 kb on - strand at 4307.919 kb on + strand at 4307.919 kb on + strand at 4307.919 kb on + strand at 4307.936 kb on - strand at 4307.936 kb on - strand at 4307.971 kb on - strand at 4307.971 kb on - strand at 4307.989 kb on - strand, within CA264_18520 at 4307.989 kb on - strand, within CA264_18520 at 4308.113 kb on + strand, within CA264_18520 at 4308.113 kb on + strand, within CA264_18520 at 4308.140 kb on - strand, within CA264_18520 at 4308.179 kb on + strand, within CA264_18520 at 4308.182 kb on + strand, within CA264_18520 at 4308.182 kb on + strand, within CA264_18520 at 4308.183 kb on - strand, within CA264_18520 at 4308.183 kb on - strand, within CA264_18520 at 4308.183 kb on - strand, within CA264_18520 at 4308.230 kb on + strand, within CA264_18520 at 4308.230 kb on + strand, within CA264_18520 at 4308.230 kb on + strand, within CA264_18520 at 4308.231 kb on - strand, within CA264_18520 at 4308.231 kb on - strand, within CA264_18520 at 4308.299 kb on + strand, within CA264_18520 at 4308.328 kb on + strand, within CA264_18520 at 4308.365 kb on + strand, within CA264_18520 at 4308.427 kb on + strand, within CA264_18520 at 4308.432 kb on - strand, within CA264_18520 at 4308.470 kb on - strand, within CA264_18520 at 4308.493 kb on + strand, within CA264_18520 at 4308.494 kb on - strand, within CA264_18520 at 4308.494 kb on - strand, within CA264_18520 at 4308.494 kb on - strand, within CA264_18520 at 4308.494 kb on - strand, within CA264_18520 at 4308.521 kb on - strand, within CA264_18520 at 4308.563 kb on + strand, within CA264_18520 at 4308.564 kb on - strand, within CA264_18520 at 4308.631 kb on + strand at 4308.631 kb on + strand at 4308.632 kb on - strand at 4308.655 kb on - strand at 4308.672 kb on + strand at 4308.672 kb on + strand at 4308.673 kb on - strand at 4308.753 kb on - strand at 4308.798 kb on - strand at 4308.798 kb on - strand at 4308.872 kb on + strand, within CA264_18525 at 4308.873 kb on - strand, within CA264_18525 at 4308.876 kb on + strand, within CA264_18525 at 4308.967 kb on + strand, within CA264_18525 at 4308.968 kb on - strand, within CA264_18525 at 4308.968 kb on - strand, within CA264_18525 at 4309.051 kb on - strand, within CA264_18525 at 4309.149 kb on - strand, within CA264_18525 at 4309.192 kb on + strand, within CA264_18525 at 4309.192 kb on + strand, within CA264_18525 at 4309.192 kb on + strand, within CA264_18525 at 4309.193 kb on - strand, within CA264_18525 at 4309.239 kb on + strand, within CA264_18525 at 4309.242 kb on - strand at 4309.242 kb on - strand at 4309.286 kb on - strand at 4309.286 kb on - strand at 4309.286 kb on - strand at 4309.407 kb on + strand at 4309.420 kb on + strand at 4309.421 kb on - strand at 4309.421 kb on - strand at 4309.422 kb on + strand at 4309.514 kb on - strand at 4309.514 kb on - strand at 4309.528 kb on - strand at 4309.556 kb on + strand at 4309.623 kb on + strand at 4309.624 kb on - strand at 4309.629 kb on + strand at 4309.630 kb on - strand at 4309.644 kb on - strand at 4309.677 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 4,306,982 - CA264_18510 0.72 -0.3 4,307,006 + CA264_18510 0.75 -0.9 4,307,054 + CA264_18510 0.81 -0.6 4,307,174 + -0.2 4,307,190 + -0.0 4,307,191 - -0.8 4,307,219 + +0.3 4,307,220 - +0.0 4,307,220 - +0.3 4,307,221 + +0.5 4,307,222 - -0.2 4,307,222 - -1.4 4,307,222 - -0.5 4,307,226 - -0.6 4,307,256 - CA264_18515 0.17 -1.1 4,307,356 + CA264_18515 0.44 -0.0 4,307,357 - CA264_18515 0.44 -0.4 4,307,380 + CA264_18515 0.50 +0.0 4,307,401 + CA264_18515 0.56 +1.0 4,307,531 - +0.3 4,307,563 + -0.1 4,307,592 + +0.3 4,307,592 + -0.2 4,307,603 + +0.2 4,307,607 + +0.0 4,307,608 - -0.4 4,307,653 - -0.9 4,307,677 + +0.0 4,307,677 + +0.0 4,307,863 + +0.8 4,307,894 + -0.0 4,307,895 - -0.7 4,307,895 - -0.1 4,307,899 + -0.9 4,307,900 - -0.2 4,307,900 - -0.5 4,307,900 - -0.0 4,307,919 + +0.3 4,307,919 + -0.7 4,307,919 + -0.0 4,307,936 - -0.3 4,307,936 - +0.4 4,307,971 - -0.6 4,307,971 - +0.6 4,307,989 - CA264_18520 0.11 +0.3 4,307,989 - CA264_18520 0.11 +0.5 4,308,113 + CA264_18520 0.27 +0.4 4,308,113 + CA264_18520 0.27 +0.1 4,308,140 - CA264_18520 0.30 -0.1 4,308,179 + CA264_18520 0.35 +0.4 4,308,182 + CA264_18520 0.36 +0.3 4,308,182 + CA264_18520 0.36 -1.3 4,308,183 - CA264_18520 0.36 -0.7 4,308,183 - CA264_18520 0.36 +0.6 4,308,183 - CA264_18520 0.36 -0.2 4,308,230 + CA264_18520 0.42 -0.0 4,308,230 + CA264_18520 0.42 -0.2 4,308,230 + CA264_18520 0.42 -0.3 4,308,231 - CA264_18520 0.42 -0.3 4,308,231 - CA264_18520 0.42 +0.3 4,308,299 + CA264_18520 0.51 +0.2 4,308,328 + CA264_18520 0.54 -1.2 4,308,365 + CA264_18520 0.59 -0.3 4,308,427 + CA264_18520 0.67 +0.3 4,308,432 - CA264_18520 0.67 +0.1 4,308,470 - CA264_18520 0.72 -0.2 4,308,493 + CA264_18520 0.75 -0.3 4,308,494 - CA264_18520 0.75 -0.1 4,308,494 - CA264_18520 0.75 +1.7 4,308,494 - CA264_18520 0.75 +0.7 4,308,494 - CA264_18520 0.75 +0.1 4,308,521 - CA264_18520 0.79 +0.3 4,308,563 + CA264_18520 0.84 -0.4 4,308,564 - CA264_18520 0.84 +0.2 4,308,631 + -0.8 4,308,631 + -0.0 4,308,632 - +0.2 4,308,655 - +0.3 4,308,672 + -0.4 4,308,672 + -0.4 4,308,673 - -1.1 4,308,753 - +0.2 4,308,798 - +0.1 4,308,798 - +0.8 4,308,872 + CA264_18525 0.22 +0.9 4,308,873 - CA264_18525 0.22 -0.1 4,308,876 + CA264_18525 0.23 +0.4 4,308,967 + CA264_18525 0.40 +0.4 4,308,968 - CA264_18525 0.40 -0.1 4,308,968 - CA264_18525 0.40 -0.9 4,309,051 - CA264_18525 0.55 -1.1 4,309,149 - CA264_18525 0.73 -1.7 4,309,192 + CA264_18525 0.81 +1.0 4,309,192 + CA264_18525 0.81 -0.0 4,309,192 + CA264_18525 0.81 +0.1 4,309,193 - CA264_18525 0.81 +0.2 4,309,239 + CA264_18525 0.89 +0.4 4,309,242 - -0.5 4,309,242 - +1.4 4,309,286 - -0.3 4,309,286 - -0.4 4,309,286 - -0.0 4,309,407 + -1.1 4,309,420 + +0.2 4,309,421 - -1.8 4,309,421 - +1.4 4,309,422 + -0.6 4,309,514 - +0.4 4,309,514 - -0.0 4,309,528 - +2.2 4,309,556 + -0.5 4,309,623 + -0.1 4,309,624 - -1.1 4,309,629 + -0.5 4,309,630 - +0.3 4,309,644 - -0.4 4,309,677 + -0.1
Or see this region's nucleotide sequence