Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17910 and CA264_17915 are separated by 23 nucleotides CA264_17915 and CA264_17920 are separated by 21 nucleotides CA264_17920 and CA264_17925 are separated by 62 nucleotides
CA264_17910: CA264_17910 - dTDP-glucose 4,6-dehydratase, at 4,163,688 to 4,164,737
_17910
CA264_17915: CA264_17915 - LPS biosynthesis protein WbpP, at 4,164,761 to 4,165,786
_17915
CA264_17920: CA264_17920 - glucose-1-phosphate thymidylyltransferase, at 4,165,808 to 4,166,668
_17920
CA264_17925: CA264_17925 - chromate transporter, at 4,166,731 to 4,167,903
_17925
Position (kb)
4164
4165
4166 Strain fitness (log2 ratio)
-1
0
1 at 4164.685 kb on + strand at 4164.709 kb on - strand at 4164.725 kb on + strand at 4164.758 kb on + strand at 4164.759 kb on - strand at 4164.760 kb on + strand at 4164.760 kb on + strand at 4164.869 kb on - strand, within CA264_17915 at 4164.923 kb on - strand, within CA264_17915 at 4164.991 kb on + strand, within CA264_17915 at 4165.079 kb on - strand, within CA264_17915 at 4165.262 kb on + strand, within CA264_17915 at 4165.520 kb on + strand, within CA264_17915 at 4165.698 kb on + strand at 4165.751 kb on - strand at 4165.785 kb on - strand at 4165.787 kb on + strand at 4165.804 kb on - strand at 4165.804 kb on - strand at 4165.805 kb on + strand at 4166.675 kb on - strand at 4166.678 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 4,164,685 + -0.1 4,164,709 - +0.3 4,164,725 + -0.8 4,164,758 + -0.8 4,164,759 - +0.1 4,164,760 + -0.2 4,164,760 + -0.3 4,164,869 - CA264_17915 0.11 -1.6 4,164,923 - CA264_17915 0.16 -0.9 4,164,991 + CA264_17915 0.22 -0.4 4,165,079 - CA264_17915 0.31 -0.6 4,165,262 + CA264_17915 0.49 +0.1 4,165,520 + CA264_17915 0.74 -0.1 4,165,698 + -1.1 4,165,751 - +0.2 4,165,785 - +0.2 4,165,787 + -0.1 4,165,804 - -0.8 4,165,804 - +0.6 4,165,805 + +0.0 4,166,675 - -0.8 4,166,678 - +0.0
Or see this region's nucleotide sequence