Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17730 and CA264_17735 are separated by 797 nucleotides CA264_17735 and CA264_17740 overlap by 4 nucleotides CA264_17740 and CA264_17745 are separated by 91 nucleotides
CA264_17730: CA264_17730 - methionine gamma-lyase, at 4,124,744 to 4,126,051
_17730
CA264_17735: CA264_17735 - antibiotic ABC transporter ATP-binding protein, at 4,126,849 to 4,128,618
_17735
CA264_17740: CA264_17740 - AraC family transcriptional regulator, at 4,128,615 to 4,129,133
_17740
CA264_17745: CA264_17745 - TetR family transcriptional regulator, at 4,129,225 to 4,129,836
_17745
Position (kb)
4126
4127
4128
4129 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4125.849 kb on + strand, within CA264_17730 at 4125.949 kb on + strand at 4125.949 kb on + strand at 4125.950 kb on - strand at 4125.950 kb on - strand at 4125.950 kb on - strand at 4125.955 kb on - strand at 4125.972 kb on + strand at 4125.973 kb on - strand at 4126.001 kb on - strand at 4126.054 kb on + strand at 4126.055 kb on - strand at 4126.055 kb on - strand at 4126.056 kb on + strand at 4126.057 kb on - strand at 4126.060 kb on + strand at 4126.070 kb on + strand at 4126.071 kb on - strand at 4126.086 kb on - strand at 4126.089 kb on + strand at 4126.089 kb on + strand at 4126.089 kb on + strand at 4126.089 kb on + strand at 4126.090 kb on - strand at 4126.090 kb on - strand at 4126.090 kb on - strand at 4126.119 kb on + strand at 4126.120 kb on - strand at 4126.150 kb on + strand at 4126.150 kb on + strand at 4126.151 kb on - strand at 4126.179 kb on + strand at 4126.179 kb on + strand at 4126.182 kb on - strand at 4126.182 kb on - strand at 4126.194 kb on + strand at 4126.242 kb on - strand at 4126.427 kb on - strand at 4126.431 kb on - strand at 4126.493 kb on + strand at 4126.494 kb on - strand at 4126.494 kb on - strand at 4126.619 kb on + strand at 4126.619 kb on + strand at 4126.619 kb on + strand at 4126.620 kb on - strand at 4126.623 kb on + strand at 4126.678 kb on + strand at 4126.678 kb on + strand at 4126.679 kb on - strand at 4126.682 kb on - strand at 4126.709 kb on + strand at 4126.709 kb on + strand at 4126.709 kb on + strand at 4126.710 kb on - strand at 4126.710 kb on - strand at 4126.758 kb on + strand at 4126.765 kb on - strand at 4126.780 kb on + strand at 4126.780 kb on + strand at 4126.781 kb on - strand at 4126.791 kb on - strand at 4126.820 kb on + strand at 4126.820 kb on + strand at 4126.821 kb on - strand at 4126.833 kb on + strand at 4126.864 kb on - strand at 4126.869 kb on + strand at 4126.876 kb on - strand at 4126.880 kb on + strand at 4126.928 kb on - strand at 4127.009 kb on - strand at 4127.015 kb on + strand at 4127.119 kb on + strand, within CA264_17735 at 4127.167 kb on - strand, within CA264_17735 at 4127.223 kb on - strand, within CA264_17735 at 4127.344 kb on + strand, within CA264_17735 at 4127.345 kb on - strand, within CA264_17735 at 4127.403 kb on + strand, within CA264_17735 at 4127.409 kb on + strand, within CA264_17735 at 4127.410 kb on - strand, within CA264_17735 at 4127.451 kb on + strand, within CA264_17735 at 4127.452 kb on - strand, within CA264_17735 at 4127.599 kb on + strand, within CA264_17735 at 4127.600 kb on - strand, within CA264_17735 at 4127.612 kb on - strand, within CA264_17735 at 4127.674 kb on + strand, within CA264_17735 at 4127.681 kb on + strand, within CA264_17735 at 4127.684 kb on + strand, within CA264_17735 at 4127.684 kb on + strand, within CA264_17735 at 4127.721 kb on + strand, within CA264_17735 at 4127.722 kb on - strand, within CA264_17735 at 4127.728 kb on + strand, within CA264_17735 at 4127.729 kb on - strand, within CA264_17735 at 4127.860 kb on + strand, within CA264_17735 at 4127.860 kb on + strand, within CA264_17735 at 4127.861 kb on - strand, within CA264_17735 at 4127.876 kb on + strand, within CA264_17735 at 4127.877 kb on - strand, within CA264_17735 at 4127.915 kb on - strand, within CA264_17735 at 4128.016 kb on - strand, within CA264_17735 at 4128.061 kb on - strand, within CA264_17735 at 4128.088 kb on + strand, within CA264_17735 at 4128.089 kb on - strand, within CA264_17735 at 4128.243 kb on + strand, within CA264_17735 at 4128.246 kb on - strand, within CA264_17735 at 4128.347 kb on - strand, within CA264_17735 at 4128.413 kb on + strand, within CA264_17735 at 4128.418 kb on + strand, within CA264_17735 at 4128.418 kb on + strand, within CA264_17735 at 4128.426 kb on - strand, within CA264_17735 at 4128.447 kb on + strand at 4128.568 kb on + strand at 4128.595 kb on + strand at 4128.596 kb on - strand at 4128.626 kb on - strand at 4128.631 kb on - strand at 4128.669 kb on + strand, within CA264_17740 at 4128.671 kb on + strand, within CA264_17740 at 4128.672 kb on - strand, within CA264_17740 at 4128.672 kb on - strand, within CA264_17740 at 4128.676 kb on - strand, within CA264_17740 at 4128.704 kb on - strand, within CA264_17740 at 4128.729 kb on + strand, within CA264_17740 at 4128.729 kb on + strand, within CA264_17740 at 4128.729 kb on + strand, within CA264_17740 at 4128.729 kb on + strand, within CA264_17740 at 4128.730 kb on - strand, within CA264_17740 at 4128.730 kb on - strand, within CA264_17740 at 4128.760 kb on + strand, within CA264_17740 at 4128.846 kb on + strand, within CA264_17740 at 4128.846 kb on + strand, within CA264_17740 at 4128.847 kb on - strand, within CA264_17740 at 4128.847 kb on - strand, within CA264_17740 at 4128.849 kb on + strand, within CA264_17740 at 4128.921 kb on - strand, within CA264_17740 at 4129.021 kb on - strand, within CA264_17740 at 4129.021 kb on - strand, within CA264_17740 at 4129.021 kb on - strand, within CA264_17740 at 4129.074 kb on + strand, within CA264_17740 at 4129.074 kb on + strand, within CA264_17740 at 4129.078 kb on + strand, within CA264_17740 at 4129.078 kb on + strand, within CA264_17740 at 4129.079 kb on - strand, within CA264_17740 at 4129.138 kb on + strand at 4129.139 kb on - strand at 4129.156 kb on - strand at 4129.158 kb on + strand at 4129.158 kb on + strand at 4129.158 kb on + strand at 4129.158 kb on + strand at 4129.158 kb on + strand at 4129.159 kb on - strand at 4129.159 kb on - strand at 4129.159 kb on - strand at 4129.159 kb on - strand at 4129.162 kb on - strand at 4129.162 kb on - strand at 4129.164 kb on - strand at 4129.212 kb on + strand at 4129.212 kb on + strand at 4129.213 kb on - strand at 4129.213 kb on - strand at 4129.216 kb on + strand at 4129.217 kb on - strand at 4129.217 kb on - strand at 4129.293 kb on - strand, within CA264_17745 at 4129.357 kb on + strand, within CA264_17745 at 4129.360 kb on + strand, within CA264_17745 at 4129.360 kb on + strand, within CA264_17745 at 4129.361 kb on - strand, within CA264_17745 at 4129.366 kb on + strand, within CA264_17745 at 4129.484 kb on - strand, within CA264_17745 at 4129.505 kb on - strand, within CA264_17745 at 4129.613 kb on - strand, within CA264_17745
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 4,125,849 + CA264_17730 0.84 -0.2 4,125,949 + +0.1 4,125,949 + -2.1 4,125,950 - -0.7 4,125,950 - -1.2 4,125,950 - +0.9 4,125,955 - -0.4 4,125,972 + -0.5 4,125,973 - -0.2 4,126,001 - -0.5 4,126,054 + -0.2 4,126,055 - -0.3 4,126,055 - -0.7 4,126,056 + -0.6 4,126,057 - -0.0 4,126,060 + +1.2 4,126,070 + +0.0 4,126,071 - -0.1 4,126,086 - +1.6 4,126,089 + -0.5 4,126,089 + -0.2 4,126,089 + -0.6 4,126,089 + +0.3 4,126,090 - +0.0 4,126,090 - -0.1 4,126,090 - -0.7 4,126,119 + -0.7 4,126,120 - +0.8 4,126,150 + -0.2 4,126,150 + -0.4 4,126,151 - +1.0 4,126,179 + +1.1 4,126,179 + +0.1 4,126,182 - -0.2 4,126,182 - -0.5 4,126,194 + -0.1 4,126,242 - -0.9 4,126,427 - -0.9 4,126,431 - -0.2 4,126,493 + -0.4 4,126,494 - -0.1 4,126,494 - -0.2 4,126,619 + -0.3 4,126,619 + +0.7 4,126,619 + +0.7 4,126,620 - +0.1 4,126,623 + +0.2 4,126,678 + +1.3 4,126,678 + -1.2 4,126,679 - -0.3 4,126,682 - -0.2 4,126,709 + -0.1 4,126,709 + -0.2 4,126,709 + +0.6 4,126,710 - +0.4 4,126,710 - +0.5 4,126,758 + +0.5 4,126,765 - -0.2 4,126,780 + -0.2 4,126,780 + -0.1 4,126,781 - -0.6 4,126,791 - -1.0 4,126,820 + -0.2 4,126,820 + -0.5 4,126,821 - -0.2 4,126,833 + +0.3 4,126,864 - +0.2 4,126,869 + -0.3 4,126,876 - +0.3 4,126,880 + -0.1 4,126,928 - +1.5 4,127,009 - +0.2 4,127,015 + +0.5 4,127,119 + CA264_17735 0.15 +0.3 4,127,167 - CA264_17735 0.18 -0.1 4,127,223 - CA264_17735 0.21 -2.3 4,127,344 + CA264_17735 0.28 +0.3 4,127,345 - CA264_17735 0.28 +0.2 4,127,403 + CA264_17735 0.31 +0.2 4,127,409 + CA264_17735 0.32 +1.5 4,127,410 - CA264_17735 0.32 +0.1 4,127,451 + CA264_17735 0.34 +0.1 4,127,452 - CA264_17735 0.34 -0.1 4,127,599 + CA264_17735 0.42 -0.6 4,127,600 - CA264_17735 0.42 +0.8 4,127,612 - CA264_17735 0.43 +0.1 4,127,674 + CA264_17735 0.47 +0.2 4,127,681 + CA264_17735 0.47 -0.1 4,127,684 + CA264_17735 0.47 -0.3 4,127,684 + CA264_17735 0.47 +0.3 4,127,721 + CA264_17735 0.49 -1.0 4,127,722 - CA264_17735 0.49 +0.3 4,127,728 + CA264_17735 0.50 +0.7 4,127,729 - CA264_17735 0.50 +0.3 4,127,860 + CA264_17735 0.57 +0.4 4,127,860 + CA264_17735 0.57 +0.3 4,127,861 - CA264_17735 0.57 -0.1 4,127,876 + CA264_17735 0.58 +2.5 4,127,877 - CA264_17735 0.58 +0.1 4,127,915 - CA264_17735 0.60 +1.6 4,128,016 - CA264_17735 0.66 +0.6 4,128,061 - CA264_17735 0.68 +0.1 4,128,088 + CA264_17735 0.70 +0.2 4,128,089 - CA264_17735 0.70 +0.2 4,128,243 + CA264_17735 0.79 +0.6 4,128,246 - CA264_17735 0.79 +0.3 4,128,347 - CA264_17735 0.85 +0.8 4,128,413 + CA264_17735 0.88 -0.7 4,128,418 + CA264_17735 0.89 +0.2 4,128,418 + CA264_17735 0.89 -0.3 4,128,426 - CA264_17735 0.89 +1.1 4,128,447 + +0.5 4,128,568 + -0.5 4,128,595 + -1.4 4,128,596 - -0.1 4,128,626 - -0.1 4,128,631 - -0.7 4,128,669 + CA264_17740 0.10 +0.0 4,128,671 + CA264_17740 0.11 -0.2 4,128,672 - CA264_17740 0.11 +0.2 4,128,672 - CA264_17740 0.11 -0.5 4,128,676 - CA264_17740 0.12 +2.6 4,128,704 - CA264_17740 0.17 -0.1 4,128,729 + CA264_17740 0.22 +0.5 4,128,729 + CA264_17740 0.22 +0.4 4,128,729 + CA264_17740 0.22 -0.2 4,128,729 + CA264_17740 0.22 -0.6 4,128,730 - CA264_17740 0.22 +0.2 4,128,730 - CA264_17740 0.22 +0.3 4,128,760 + CA264_17740 0.28 +0.3 4,128,846 + CA264_17740 0.45 -0.2 4,128,846 + CA264_17740 0.45 +1.4 4,128,847 - CA264_17740 0.45 +0.2 4,128,847 - CA264_17740 0.45 -0.0 4,128,849 + CA264_17740 0.45 +0.1 4,128,921 - CA264_17740 0.59 +2.6 4,129,021 - CA264_17740 0.78 -0.9 4,129,021 - CA264_17740 0.78 +1.4 4,129,021 - CA264_17740 0.78 -1.1 4,129,074 + CA264_17740 0.88 +0.0 4,129,074 + CA264_17740 0.88 +0.1 4,129,078 + CA264_17740 0.89 -0.3 4,129,078 + CA264_17740 0.89 -1.0 4,129,079 - CA264_17740 0.89 +1.0 4,129,138 + +0.1 4,129,139 - -0.2 4,129,156 - -0.5 4,129,158 + -1.3 4,129,158 + +0.5 4,129,158 + +0.0 4,129,158 + +1.2 4,129,158 + +0.9 4,129,159 - +0.1 4,129,159 - +0.5 4,129,159 - -0.2 4,129,159 - +0.5 4,129,162 - -0.2 4,129,162 - +0.2 4,129,164 - +0.0 4,129,212 + +1.2 4,129,212 + +0.1 4,129,213 - -1.2 4,129,213 - -0.1 4,129,216 + -1.2 4,129,217 - -0.7 4,129,217 - -0.2 4,129,293 - CA264_17745 0.11 -0.7 4,129,357 + CA264_17745 0.22 +0.0 4,129,360 + CA264_17745 0.22 -0.1 4,129,360 + CA264_17745 0.22 +0.0 4,129,361 - CA264_17745 0.22 -0.7 4,129,366 + CA264_17745 0.23 -0.3 4,129,484 - CA264_17745 0.42 +0.2 4,129,505 - CA264_17745 0.46 -1.3 4,129,613 - CA264_17745 0.63 +0.2
Or see this region's nucleotide sequence