Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16820 and CA264_16825 are separated by 322 nucleotides CA264_16825 and CA264_16830 are separated by 275 nucleotides
CA264_16820: CA264_16820 - hypothetical protein, at 3,925,902 to 3,926,468
_16820
CA264_16825: CA264_16825 - hypothetical protein, at 3,926,791 to 3,927,420
_16825
CA264_16830: CA264_16830 - (2Fe-2S)-binding protein, at 3,927,696 to 3,929,228
_16830
Position (kb)
3926
3927
3928 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3925.903 kb on + strand at 3925.917 kb on - strand at 3925.924 kb on - strand at 3925.924 kb on - strand at 3925.928 kb on + strand at 3926.054 kb on - strand, within CA264_16820 at 3926.135 kb on + strand, within CA264_16820 at 3926.147 kb on + strand, within CA264_16820 at 3926.148 kb on - strand, within CA264_16820 at 3926.149 kb on + strand, within CA264_16820 at 3926.149 kb on + strand, within CA264_16820 at 3926.203 kb on + strand, within CA264_16820 at 3926.252 kb on - strand, within CA264_16820 at 3926.279 kb on + strand, within CA264_16820 at 3926.287 kb on + strand, within CA264_16820 at 3926.288 kb on - strand, within CA264_16820 at 3926.288 kb on - strand, within CA264_16820 at 3926.288 kb on - strand, within CA264_16820 at 3926.372 kb on + strand, within CA264_16820 at 3926.373 kb on - strand, within CA264_16820 at 3926.417 kb on + strand at 3926.507 kb on - strand at 3926.507 kb on - strand at 3926.521 kb on - strand at 3926.521 kb on - strand at 3926.566 kb on - strand at 3926.583 kb on + strand at 3926.653 kb on + strand at 3926.660 kb on + strand at 3926.785 kb on - strand at 3926.789 kb on - strand at 3926.793 kb on - strand at 3926.793 kb on - strand at 3926.834 kb on - strand at 3926.894 kb on - strand, within CA264_16825 at 3926.914 kb on + strand, within CA264_16825 at 3926.915 kb on - strand, within CA264_16825 at 3926.982 kb on - strand, within CA264_16825 at 3927.059 kb on - strand, within CA264_16825 at 3927.141 kb on - strand, within CA264_16825 at 3927.222 kb on + strand, within CA264_16825 at 3927.222 kb on + strand, within CA264_16825 at 3927.247 kb on + strand, within CA264_16825 at 3927.256 kb on + strand, within CA264_16825 at 3927.277 kb on + strand, within CA264_16825 at 3927.283 kb on - strand, within CA264_16825 at 3927.299 kb on + strand, within CA264_16825 at 3927.401 kb on - strand at 3927.404 kb on - strand at 3927.479 kb on - strand at 3927.551 kb on - strand at 3927.621 kb on + strand at 3927.621 kb on + strand at 3927.668 kb on - strand at 3927.668 kb on - strand at 3927.725 kb on - strand at 3927.828 kb on + strand at 3927.875 kb on - strand, within CA264_16830 at 3927.918 kb on + strand, within CA264_16830 at 3927.918 kb on + strand, within CA264_16830 at 3927.919 kb on - strand, within CA264_16830 at 3927.919 kb on - strand, within CA264_16830 at 3928.009 kb on + strand, within CA264_16830 at 3928.040 kb on + strand, within CA264_16830 at 3928.045 kb on + strand, within CA264_16830 at 3928.045 kb on + strand, within CA264_16830 at 3928.046 kb on - strand, within CA264_16830 at 3928.046 kb on - strand, within CA264_16830 at 3928.325 kb on - strand, within CA264_16830 at 3928.371 kb on - strand, within CA264_16830
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 3,925,903 + -0.6 3,925,917 - +0.1 3,925,924 - +1.1 3,925,924 - -0.5 3,925,928 + +0.1 3,926,054 - CA264_16820 0.27 -0.7 3,926,135 + CA264_16820 0.41 -0.1 3,926,147 + CA264_16820 0.43 +1.5 3,926,148 - CA264_16820 0.43 -0.8 3,926,149 + CA264_16820 0.44 -1.3 3,926,149 + CA264_16820 0.44 +0.4 3,926,203 + CA264_16820 0.53 -0.8 3,926,252 - CA264_16820 0.62 +0.1 3,926,279 + CA264_16820 0.66 +0.0 3,926,287 + CA264_16820 0.68 -2.0 3,926,288 - CA264_16820 0.68 -0.2 3,926,288 - CA264_16820 0.68 -0.1 3,926,288 - CA264_16820 0.68 +0.6 3,926,372 + CA264_16820 0.83 +0.1 3,926,373 - CA264_16820 0.83 +0.0 3,926,417 + +0.2 3,926,507 - -0.3 3,926,507 - -2.4 3,926,521 - -1.6 3,926,521 - +0.1 3,926,566 - -0.1 3,926,583 + -0.2 3,926,653 + -0.4 3,926,660 + -0.5 3,926,785 - -0.3 3,926,789 - -0.5 3,926,793 - +0.4 3,926,793 - +0.0 3,926,834 - -0.3 3,926,894 - CA264_16825 0.16 +0.1 3,926,914 + CA264_16825 0.20 -0.3 3,926,915 - CA264_16825 0.20 -0.3 3,926,982 - CA264_16825 0.30 +0.9 3,927,059 - CA264_16825 0.43 +0.8 3,927,141 - CA264_16825 0.56 -0.1 3,927,222 + CA264_16825 0.68 -0.3 3,927,222 + CA264_16825 0.68 -0.3 3,927,247 + CA264_16825 0.72 +0.0 3,927,256 + CA264_16825 0.74 +0.1 3,927,277 + CA264_16825 0.77 +0.4 3,927,283 - CA264_16825 0.78 +0.1 3,927,299 + CA264_16825 0.81 +1.0 3,927,401 - -0.5 3,927,404 - +1.0 3,927,479 - +0.0 3,927,551 - +0.0 3,927,621 + -0.3 3,927,621 + -0.2 3,927,668 - -1.0 3,927,668 - -0.2 3,927,725 - +1.0 3,927,828 + -1.1 3,927,875 - CA264_16830 0.12 -1.0 3,927,918 + CA264_16830 0.14 +2.1 3,927,918 + CA264_16830 0.14 -0.4 3,927,919 - CA264_16830 0.15 -0.5 3,927,919 - CA264_16830 0.15 -0.8 3,928,009 + CA264_16830 0.20 -1.5 3,928,040 + CA264_16830 0.22 +0.0 3,928,045 + CA264_16830 0.23 -0.4 3,928,045 + CA264_16830 0.23 -0.4 3,928,046 - CA264_16830 0.23 -0.6 3,928,046 - CA264_16830 0.23 -0.1 3,928,325 - CA264_16830 0.41 -0.5 3,928,371 - CA264_16830 0.44 -1.0
Or see this region's nucleotide sequence