Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15205 and CA264_15210 are separated by 76 nucleotides CA264_15210 and CA264_15215 are separated by 29 nucleotides CA264_15215 and CA264_15220 are separated by 17 nucleotides
CA264_15205: CA264_15205 - RNA pseudouridine synthase, at 3,562,298 to 3,563,332
_15205
CA264_15210: CA264_15210 - outer membrane chaperone Skp, at 3,563,409 to 3,564,017
_15210
CA264_15215: CA264_15215 - hypothetical protein, at 3,564,047 to 3,564,712
_15215
CA264_15220: CA264_15220 - outer membrane protein assembly factor BamA, at 3,564,730 to 3,567,228
_15220
Position (kb)
3564
3565 Strain fitness (log2 ratio)
-1
0
1 at 3563.121 kb on - strand, within CA264_15205 at 3563.186 kb on + strand, within CA264_15205 at 3563.186 kb on + strand, within CA264_15205 at 3563.187 kb on - strand, within CA264_15205 at 3563.372 kb on + strand at 3563.411 kb on - strand at 3563.411 kb on - strand at 3564.030 kb on + strand at 3564.031 kb on - strand at 3564.034 kb on - strand at 3564.036 kb on + strand at 3564.036 kb on + strand at 3564.037 kb on - strand at 3564.038 kb on + strand at 3564.039 kb on - strand at 3564.040 kb on + strand at 3564.187 kb on + strand, within CA264_15215 at 3564.258 kb on + strand, within CA264_15215 at 3564.286 kb on - strand, within CA264_15215 at 3564.326 kb on + strand, within CA264_15215 at 3564.339 kb on - strand, within CA264_15215 at 3564.396 kb on + strand, within CA264_15215 at 3564.418 kb on - strand, within CA264_15215 at 3564.570 kb on + strand, within CA264_15215 at 3564.600 kb on + strand, within CA264_15215 at 3564.614 kb on - strand, within CA264_15215 at 3564.614 kb on - strand, within CA264_15215 at 3564.614 kb on - strand, within CA264_15215 at 3564.715 kb on + strand at 3564.732 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 3,563,121 - CA264_15205 0.80 +0.0 3,563,186 + CA264_15205 0.86 -0.7 3,563,186 + CA264_15205 0.86 -1.1 3,563,187 - CA264_15205 0.86 +1.2 3,563,372 + -1.1 3,563,411 - +1.2 3,563,411 - -0.5 3,564,030 + -0.7 3,564,031 - -0.1 3,564,034 - +0.1 3,564,036 + +0.5 3,564,036 + -1.0 3,564,037 - +0.6 3,564,038 + -0.7 3,564,039 - -0.2 3,564,040 + -0.2 3,564,187 + CA264_15215 0.21 -0.9 3,564,258 + CA264_15215 0.32 -0.1 3,564,286 - CA264_15215 0.36 -0.6 3,564,326 + CA264_15215 0.42 -0.6 3,564,339 - CA264_15215 0.44 -1.1 3,564,396 + CA264_15215 0.52 -0.8 3,564,418 - CA264_15215 0.56 -0.7 3,564,570 + CA264_15215 0.79 -0.3 3,564,600 + CA264_15215 0.83 +0.1 3,564,614 - CA264_15215 0.85 -0.7 3,564,614 - CA264_15215 0.85 -0.5 3,564,614 - CA264_15215 0.85 -0.3 3,564,715 + -1.1 3,564,732 - -0.1
Or see this region's nucleotide sequence