Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13140 and CA264_13145 are separated by 123 nucleotides CA264_13145 and CA264_13150 are separated by 140 nucleotides CA264_13150 and CA264_13155 are separated by 382 nucleotides CA264_13155 and CA264_13160 are separated by 52 nucleotides
CA264_13140: CA264_13140 - hypothetical protein, at 3,063,729 to 3,064,421
_13140
CA264_13145: CA264_13145 - hypothetical protein, at 3,064,545 to 3,065,198
_13145
CA264_13150: CA264_13150 - hypothetical protein, at 3,065,339 to 3,065,869
_13150
CA264_13155: CA264_13155 - response regulator, at 3,066,252 to 3,066,683
_13155
CA264_13160: CA264_13160 - hypothetical protein, at 3,066,736 to 3,067,341
_13160
Position (kb)
3065
3066 Strain fitness (log2 ratio)
-1
0
1 at 3064.348 kb on + strand, within CA264_13140 at 3064.392 kb on - strand at 3064.482 kb on + strand at 3064.483 kb on - strand at 3064.483 kb on - strand at 3064.484 kb on + strand at 3064.502 kb on - strand at 3064.539 kb on + strand at 3064.539 kb on + strand at 3064.539 kb on + strand at 3064.540 kb on - strand at 3064.544 kb on + strand at 3064.544 kb on + strand at 3064.561 kb on + strand at 3064.566 kb on - strand at 3064.792 kb on + strand, within CA264_13145 at 3064.792 kb on + strand, within CA264_13145 at 3064.793 kb on - strand, within CA264_13145 at 3064.843 kb on + strand, within CA264_13145 at 3064.887 kb on + strand, within CA264_13145 at 3064.978 kb on + strand, within CA264_13145 at 3065.018 kb on + strand, within CA264_13145 at 3065.204 kb on - strand at 3065.215 kb on - strand at 3065.235 kb on + strand at 3065.239 kb on + strand at 3065.277 kb on - strand at 3065.277 kb on - strand at 3065.277 kb on - strand at 3065.319 kb on - strand at 3065.325 kb on + strand at 3065.338 kb on + strand at 3065.457 kb on + strand, within CA264_13150 at 3065.457 kb on + strand, within CA264_13150 at 3065.457 kb on + strand, within CA264_13150 at 3065.539 kb on + strand, within CA264_13150 at 3065.540 kb on - strand, within CA264_13150 at 3065.641 kb on - strand, within CA264_13150 at 3065.748 kb on + strand, within CA264_13150 at 3065.819 kb on + strand at 3065.820 kb on - strand at 3065.862 kb on - strand at 3065.891 kb on - strand at 3065.901 kb on + strand at 3065.955 kb on + strand at 3065.969 kb on - strand at 3066.045 kb on - strand at 3066.074 kb on - strand at 3066.101 kb on + strand at 3066.101 kb on + strand at 3066.109 kb on + strand at 3066.132 kb on - strand at 3066.134 kb on - strand at 3066.143 kb on + strand at 3066.192 kb on - strand at 3066.226 kb on - strand at 3066.256 kb on - strand at 3066.296 kb on - strand, within CA264_13155 at 3066.317 kb on + strand, within CA264_13155 at 3066.342 kb on - strand, within CA264_13155 at 3066.350 kb on - strand, within CA264_13155 at 3066.489 kb on + strand, within CA264_13155 at 3066.562 kb on + strand, within CA264_13155 at 3066.579 kb on + strand, within CA264_13155 at 3066.600 kb on - strand, within CA264_13155 at 3066.663 kb on - strand at 3066.695 kb on - strand at 3066.730 kb on + strand at 3066.730 kb on + strand at 3066.731 kb on - strand at 3066.744 kb on + strand at 3066.744 kb on + strand at 3066.752 kb on + strand at 3066.837 kb on + strand, within CA264_13160
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 3,064,348 + CA264_13140 0.89 -0.1 3,064,392 - -1.1 3,064,482 + -0.6 3,064,483 - -1.1 3,064,483 - -0.1 3,064,484 + -0.5 3,064,502 - -0.3 3,064,539 + -0.6 3,064,539 + -1.2 3,064,539 + -0.7 3,064,540 - +0.1 3,064,544 + +0.2 3,064,544 + -0.2 3,064,561 + -0.6 3,064,566 - -0.1 3,064,792 + CA264_13145 0.38 +0.1 3,064,792 + CA264_13145 0.38 +0.0 3,064,793 - CA264_13145 0.38 +1.3 3,064,843 + CA264_13145 0.46 +0.2 3,064,887 + CA264_13145 0.52 +0.0 3,064,978 + CA264_13145 0.66 +0.0 3,065,018 + CA264_13145 0.72 -0.2 3,065,204 - -0.2 3,065,215 - +1.3 3,065,235 + -0.3 3,065,239 + -0.3 3,065,277 - -0.2 3,065,277 - -0.3 3,065,277 - -0.2 3,065,319 - +0.5 3,065,325 + +0.2 3,065,338 + -0.6 3,065,457 + CA264_13150 0.22 +0.7 3,065,457 + CA264_13150 0.22 -0.1 3,065,457 + CA264_13150 0.22 +0.4 3,065,539 + CA264_13150 0.38 +0.0 3,065,540 - CA264_13150 0.38 +0.1 3,065,641 - CA264_13150 0.57 +0.8 3,065,748 + CA264_13150 0.77 -0.1 3,065,819 + -0.5 3,065,820 - -0.1 3,065,862 - -1.1 3,065,891 - +0.2 3,065,901 + +0.6 3,065,955 + -1.0 3,065,969 - -0.1 3,066,045 - +0.0 3,066,074 - -0.6 3,066,101 + +0.1 3,066,101 + +0.8 3,066,109 + +0.9 3,066,132 - -0.3 3,066,134 - -0.4 3,066,143 + -1.3 3,066,192 - +0.7 3,066,226 - +1.1 3,066,256 - -0.3 3,066,296 - CA264_13155 0.10 +0.1 3,066,317 + CA264_13155 0.15 -0.5 3,066,342 - CA264_13155 0.21 +0.4 3,066,350 - CA264_13155 0.23 -0.4 3,066,489 + CA264_13155 0.55 +0.9 3,066,562 + CA264_13155 0.72 -0.2 3,066,579 + CA264_13155 0.76 -0.1 3,066,600 - CA264_13155 0.81 +0.1 3,066,663 - +0.8 3,066,695 - -0.7 3,066,730 + -0.4 3,066,730 + -0.6 3,066,731 - -0.3 3,066,744 + +0.4 3,066,744 + -1.2 3,066,752 + -0.4 3,066,837 + CA264_13160 0.17 -1.1
Or see this region's nucleotide sequence