Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11165 and CA264_11170 overlap by 4 nucleotides CA264_11170 and CA264_11175 are separated by 98 nucleotides CA264_11175 and CA264_11180 are separated by 385 nucleotides
CA264_11165: CA264_11165 - malto-oligosyltrehalose synthase, at 2,584,770 to 2,587,478
_11165
CA264_11170: CA264_11170 - 4-alpha-glucanotransferase, at 2,587,475 to 2,588,989
_11170
CA264_11175: CA264_11175 - hypothetical protein, at 2,589,088 to 2,589,582
_11175
CA264_11180: CA264_11180 - thioredoxin family protein, at 2,589,968 to 2,590,525
_11180
Position (kb)
2587
2588
2589 Strain fitness (log2 ratio)
-1
0
1
2 at 2586.577 kb on + strand, within CA264_11165 at 2586.636 kb on + strand, within CA264_11165 at 2586.637 kb on - strand, within CA264_11165 at 2586.748 kb on + strand, within CA264_11165 at 2586.780 kb on + strand, within CA264_11165 at 2586.780 kb on + strand, within CA264_11165 at 2586.780 kb on + strand, within CA264_11165 at 2586.836 kb on + strand, within CA264_11165 at 2586.836 kb on + strand, within CA264_11165 at 2586.838 kb on + strand, within CA264_11165 at 2586.839 kb on - strand, within CA264_11165 at 2586.839 kb on - strand, within CA264_11165 at 2587.005 kb on + strand, within CA264_11165 at 2587.006 kb on - strand, within CA264_11165 at 2587.109 kb on - strand, within CA264_11165 at 2587.179 kb on + strand, within CA264_11165 at 2587.256 kb on - strand at 2587.261 kb on + strand at 2587.261 kb on + strand at 2587.262 kb on - strand at 2587.262 kb on - strand at 2587.291 kb on + strand at 2587.394 kb on + strand at 2587.400 kb on - strand at 2587.435 kb on + strand at 2587.435 kb on + strand at 2587.566 kb on - strand at 2587.568 kb on - strand at 2587.568 kb on - strand at 2587.698 kb on + strand, within CA264_11170 at 2587.916 kb on + strand, within CA264_11170 at 2587.917 kb on - strand, within CA264_11170 at 2587.947 kb on - strand, within CA264_11170 at 2587.983 kb on + strand, within CA264_11170 at 2587.984 kb on - strand, within CA264_11170 at 2588.135 kb on - strand, within CA264_11170 at 2588.144 kb on + strand, within CA264_11170 at 2588.244 kb on - strand, within CA264_11170 at 2588.397 kb on - strand, within CA264_11170 at 2588.470 kb on - strand, within CA264_11170 at 2588.491 kb on + strand, within CA264_11170 at 2588.624 kb on + strand, within CA264_11170 at 2588.624 kb on + strand, within CA264_11170 at 2588.625 kb on - strand, within CA264_11170 at 2588.625 kb on - strand, within CA264_11170 at 2588.625 kb on - strand, within CA264_11170 at 2588.660 kb on + strand, within CA264_11170 at 2588.700 kb on - strand, within CA264_11170 at 2588.745 kb on - strand, within CA264_11170 at 2588.757 kb on - strand, within CA264_11170 at 2588.832 kb on - strand, within CA264_11170 at 2588.845 kb on - strand at 2588.845 kb on - strand at 2588.987 kb on + strand at 2588.987 kb on + strand at 2588.988 kb on - strand at 2589.106 kb on - strand at 2589.108 kb on - strand at 2589.238 kb on - strand, within CA264_11175 at 2589.353 kb on - strand, within CA264_11175 at 2589.398 kb on + strand, within CA264_11175 at 2589.399 kb on - strand, within CA264_11175 at 2589.399 kb on - strand, within CA264_11175 at 2589.399 kb on - strand, within CA264_11175 at 2589.407 kb on + strand, within CA264_11175 at 2589.448 kb on - strand at 2589.495 kb on + strand, within CA264_11175 at 2589.535 kb on + strand at 2589.536 kb on - strand at 2589.590 kb on + strand at 2589.677 kb on + strand at 2589.678 kb on - strand at 2589.711 kb on - strand at 2589.779 kb on - strand at 2589.779 kb on - strand at 2589.823 kb on - strand at 2589.829 kb on - strand at 2589.895 kb on + strand at 2589.896 kb on - strand at 2589.897 kb on + strand at 2589.919 kb on - strand at 2589.919 kb on - strand at 2589.927 kb on + strand at 2589.927 kb on + strand at 2589.928 kb on - strand at 2589.928 kb on - strand at 2589.928 kb on - strand at 2589.930 kb on + strand at 2589.930 kb on + strand at 2589.931 kb on - strand at 2589.937 kb on + strand at 2589.937 kb on + strand at 2589.937 kb on + strand at 2589.937 kb on + strand at 2589.938 kb on - strand at 2589.938 kb on - strand at 2589.938 kb on - strand at 2589.943 kb on - strand at 2589.943 kb on - strand at 2589.968 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 2,586,577 + CA264_11165 0.67 +0.1 2,586,636 + CA264_11165 0.69 -1.4 2,586,637 - CA264_11165 0.69 -1.2 2,586,748 + CA264_11165 0.73 +0.4 2,586,780 + CA264_11165 0.74 -0.2 2,586,780 + CA264_11165 0.74 +0.1 2,586,780 + CA264_11165 0.74 -0.0 2,586,836 + CA264_11165 0.76 -0.3 2,586,836 + CA264_11165 0.76 -0.6 2,586,838 + CA264_11165 0.76 +0.2 2,586,839 - CA264_11165 0.76 -0.6 2,586,839 - CA264_11165 0.76 -1.7 2,587,005 + CA264_11165 0.83 +0.2 2,587,006 - CA264_11165 0.83 -0.1 2,587,109 - CA264_11165 0.86 +0.4 2,587,179 + CA264_11165 0.89 +0.0 2,587,256 - +0.4 2,587,261 + -0.2 2,587,261 + +0.6 2,587,262 - +0.4 2,587,262 - +0.1 2,587,291 + -0.0 2,587,394 + +1.3 2,587,400 - -0.1 2,587,435 + -0.2 2,587,435 + +0.7 2,587,566 - +0.1 2,587,568 - +0.3 2,587,568 - -0.9 2,587,698 + CA264_11170 0.15 -0.0 2,587,916 + CA264_11170 0.29 +1.1 2,587,917 - CA264_11170 0.29 +1.1 2,587,947 - CA264_11170 0.31 -0.4 2,587,983 + CA264_11170 0.34 +0.9 2,587,984 - CA264_11170 0.34 -0.1 2,588,135 - CA264_11170 0.44 +1.3 2,588,144 + CA264_11170 0.44 -0.9 2,588,244 - CA264_11170 0.51 +1.0 2,588,397 - CA264_11170 0.61 +0.1 2,588,470 - CA264_11170 0.66 +0.9 2,588,491 + CA264_11170 0.67 -0.1 2,588,624 + CA264_11170 0.76 +0.4 2,588,624 + CA264_11170 0.76 +0.1 2,588,625 - CA264_11170 0.76 +2.3 2,588,625 - CA264_11170 0.76 +0.6 2,588,625 - CA264_11170 0.76 +0.8 2,588,660 + CA264_11170 0.78 -0.6 2,588,700 - CA264_11170 0.81 +0.5 2,588,745 - CA264_11170 0.84 -0.4 2,588,757 - CA264_11170 0.85 -0.4 2,588,832 - CA264_11170 0.90 +0.3 2,588,845 - -0.0 2,588,845 - +0.9 2,588,987 + +0.4 2,588,987 + +0.0 2,588,988 - -0.8 2,589,106 - -0.7 2,589,108 - -0.2 2,589,238 - CA264_11175 0.30 -0.2 2,589,353 - CA264_11175 0.54 +0.6 2,589,398 + CA264_11175 0.63 -0.1 2,589,399 - CA264_11175 0.63 +0.4 2,589,399 - CA264_11175 0.63 +0.0 2,589,399 - CA264_11175 0.63 +0.4 2,589,407 + CA264_11175 0.64 -0.8 2,589,448 - +1.3 2,589,495 + CA264_11175 0.82 +0.7 2,589,535 + +0.9 2,589,536 - +1.7 2,589,590 + -0.9 2,589,677 + -0.5 2,589,678 - +0.1 2,589,711 - -0.4 2,589,779 - +0.0 2,589,779 - -0.0 2,589,823 - -0.8 2,589,829 - +0.3 2,589,895 + +1.3 2,589,896 - -0.8 2,589,897 + +0.4 2,589,919 - -0.5 2,589,919 - -0.6 2,589,927 + -0.3 2,589,927 + -0.8 2,589,928 - -1.7 2,589,928 - -0.2 2,589,928 - -1.4 2,589,930 + +0.5 2,589,930 + -0.5 2,589,931 - -0.5 2,589,937 + +0.2 2,589,937 + -0.6 2,589,937 + -0.7 2,589,937 + +0.9 2,589,938 - -0.3 2,589,938 - -0.1 2,589,938 - +0.2 2,589,943 - +0.1 2,589,943 - -0.1 2,589,968 - -0.2
Or see this region's nucleotide sequence