Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10940 and CA264_10945 are separated by 109 nucleotides CA264_10945 and CA264_10950 overlap by 1 nucleotides CA264_10950 and CA264_10955 are separated by 103 nucleotides CA264_10955 and CA264_10960 are separated by 116 nucleotides
CA264_10940: CA264_10940 - phenylacetate-CoA oxygenase subunit PaaA, at 2,524,546 to 2,525,532
_10940
CA264_10945: CA264_10945 - phenylacetic acid degradation b, at 2,525,642 to 2,526,277
_10945
CA264_10950: CA264_10950 - phenylacetate-CoA oxygenase subunit PaaI, at 2,526,277 to 2,527,032
_10950
CA264_10955: CA264_10955 - phenylacetate-CoA oxygenase subunit PaaJ, at 2,527,136 to 2,527,621
_10955
CA264_10960: CA264_10960 - copper homeostasis protein, at 2,527,738 to 2,528,169
_10960
Position (kb)
2526
2527
2528 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2525.290 kb on + strand, within CA264_10940 at 2525.290 kb on + strand, within CA264_10940 at 2525.290 kb on + strand, within CA264_10940 at 2525.291 kb on - strand, within CA264_10940 at 2525.291 kb on - strand, within CA264_10940 at 2525.291 kb on - strand, within CA264_10940 at 2525.291 kb on - strand, within CA264_10940 at 2525.372 kb on - strand, within CA264_10940 at 2525.540 kb on + strand at 2525.561 kb on + strand at 2525.596 kb on - strand at 2525.629 kb on + strand at 2525.634 kb on - strand at 2525.744 kb on + strand, within CA264_10945 at 2525.744 kb on + strand, within CA264_10945 at 2525.782 kb on + strand, within CA264_10945 at 2525.782 kb on + strand, within CA264_10945 at 2525.783 kb on - strand, within CA264_10945 at 2525.786 kb on + strand, within CA264_10945 at 2525.786 kb on + strand, within CA264_10945 at 2525.786 kb on + strand, within CA264_10945 at 2525.786 kb on + strand, within CA264_10945 at 2525.787 kb on - strand, within CA264_10945 at 2525.787 kb on - strand, within CA264_10945 at 2525.937 kb on - strand, within CA264_10945 at 2525.937 kb on - strand, within CA264_10945 at 2526.028 kb on + strand, within CA264_10945 at 2526.029 kb on - strand, within CA264_10945 at 2526.060 kb on - strand, within CA264_10945 at 2526.130 kb on - strand, within CA264_10945 at 2526.218 kb on + strand at 2526.218 kb on + strand at 2526.218 kb on + strand at 2526.218 kb on + strand at 2526.218 kb on + strand at 2526.219 kb on - strand at 2526.220 kb on + strand at 2526.220 kb on + strand at 2526.247 kb on + strand at 2526.275 kb on + strand at 2526.307 kb on + strand at 2526.330 kb on + strand at 2526.331 kb on - strand at 2526.331 kb on - strand at 2526.332 kb on + strand at 2526.439 kb on + strand, within CA264_10950 at 2526.439 kb on + strand, within CA264_10950 at 2526.528 kb on - strand, within CA264_10950 at 2526.625 kb on + strand, within CA264_10950 at 2526.668 kb on + strand, within CA264_10950 at 2526.669 kb on - strand, within CA264_10950 at 2526.674 kb on - strand, within CA264_10950 at 2526.734 kb on + strand, within CA264_10950 at 2526.833 kb on - strand, within CA264_10950 at 2527.077 kb on + strand at 2527.078 kb on - strand at 2527.086 kb on + strand at 2527.087 kb on - strand at 2527.111 kb on + strand at 2527.112 kb on - strand at 2527.112 kb on - strand at 2527.117 kb on + strand at 2527.117 kb on + strand at 2527.118 kb on - strand at 2527.130 kb on - strand at 2527.132 kb on + strand at 2527.132 kb on + strand at 2527.133 kb on - strand at 2527.158 kb on + strand at 2527.159 kb on - strand at 2527.159 kb on - strand at 2527.308 kb on - strand, within CA264_10955 at 2527.324 kb on - strand, within CA264_10955 at 2527.461 kb on - strand, within CA264_10955 at 2527.493 kb on + strand, within CA264_10955 at 2527.574 kb on + strand at 2527.620 kb on - strand at 2527.623 kb on + strand at 2527.623 kb on + strand at 2527.632 kb on - strand at 2527.632 kb on - strand at 2527.640 kb on - strand at 2527.657 kb on + strand at 2527.658 kb on - strand at 2527.664 kb on + strand at 2527.665 kb on - strand at 2527.682 kb on + strand at 2527.683 kb on - strand at 2527.683 kb on - strand at 2527.689 kb on - strand at 2527.740 kb on - strand at 2527.740 kb on - strand at 2527.873 kb on - strand, within CA264_10960 at 2527.885 kb on + strand, within CA264_10960 at 2527.885 kb on + strand, within CA264_10960 at 2527.886 kb on - strand, within CA264_10960 at 2527.937 kb on - strand, within CA264_10960 at 2527.937 kb on - strand, within CA264_10960 at 2527.937 kb on - strand, within CA264_10960 at 2527.956 kb on + strand, within CA264_10960 at 2527.956 kb on + strand, within CA264_10960 at 2527.956 kb on + strand, within CA264_10960 at 2527.956 kb on + strand, within CA264_10960 at 2527.982 kb on + strand, within CA264_10960 at 2527.982 kb on + strand, within CA264_10960 at 2527.986 kb on + strand, within CA264_10960
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 2,525,290 + CA264_10940 0.75 -0.3 2,525,290 + CA264_10940 0.75 -0.5 2,525,290 + CA264_10940 0.75 +0.1 2,525,291 - CA264_10940 0.75 +0.2 2,525,291 - CA264_10940 0.75 -0.4 2,525,291 - CA264_10940 0.75 +0.5 2,525,291 - CA264_10940 0.75 +1.6 2,525,372 - CA264_10940 0.84 -0.5 2,525,540 + -0.4 2,525,561 + -0.2 2,525,596 - -0.3 2,525,629 + -1.0 2,525,634 - +0.1 2,525,744 + CA264_10945 0.16 +0.1 2,525,744 + CA264_10945 0.16 +0.1 2,525,782 + CA264_10945 0.22 -0.4 2,525,782 + CA264_10945 0.22 +0.2 2,525,783 - CA264_10945 0.22 +0.2 2,525,786 + CA264_10945 0.23 +0.1 2,525,786 + CA264_10945 0.23 -0.5 2,525,786 + CA264_10945 0.23 -0.4 2,525,786 + CA264_10945 0.23 +0.4 2,525,787 - CA264_10945 0.23 -0.0 2,525,787 - CA264_10945 0.23 +0.4 2,525,937 - CA264_10945 0.46 +0.2 2,525,937 - CA264_10945 0.46 +0.6 2,526,028 + CA264_10945 0.61 +0.6 2,526,029 - CA264_10945 0.61 -0.6 2,526,060 - CA264_10945 0.66 -0.1 2,526,130 - CA264_10945 0.77 +0.4 2,526,218 + -0.1 2,526,218 + -0.3 2,526,218 + -0.2 2,526,218 + +0.7 2,526,218 + +0.5 2,526,219 - -0.8 2,526,220 + +1.3 2,526,220 + +0.0 2,526,247 + -0.2 2,526,275 + +0.2 2,526,307 + +0.5 2,526,330 + +0.9 2,526,331 - +0.0 2,526,331 - +0.5 2,526,332 + +0.0 2,526,439 + CA264_10950 0.21 +0.4 2,526,439 + CA264_10950 0.21 -1.4 2,526,528 - CA264_10950 0.33 -0.4 2,526,625 + CA264_10950 0.46 +0.3 2,526,668 + CA264_10950 0.52 +0.3 2,526,669 - CA264_10950 0.52 -1.3 2,526,674 - CA264_10950 0.53 -0.3 2,526,734 + CA264_10950 0.60 +0.6 2,526,833 - CA264_10950 0.74 -0.4 2,527,077 + +0.2 2,527,078 - +0.1 2,527,086 + -1.0 2,527,087 - +0.1 2,527,111 + +0.1 2,527,112 - -0.9 2,527,112 - -1.8 2,527,117 + +0.2 2,527,117 + -2.6 2,527,118 - -0.1 2,527,130 - +0.1 2,527,132 + -0.4 2,527,132 + +0.3 2,527,133 - +0.1 2,527,158 + -0.8 2,527,159 - -0.3 2,527,159 - -0.8 2,527,308 - CA264_10955 0.35 +1.0 2,527,324 - CA264_10955 0.39 -0.1 2,527,461 - CA264_10955 0.67 -0.9 2,527,493 + CA264_10955 0.73 -0.2 2,527,574 + -0.0 2,527,620 - +0.2 2,527,623 + -0.6 2,527,623 + -0.9 2,527,632 - -0.1 2,527,632 - +0.1 2,527,640 - -1.0 2,527,657 + +2.9 2,527,658 - -0.4 2,527,664 + +1.3 2,527,665 - +0.5 2,527,682 + -0.2 2,527,683 - +0.2 2,527,683 - -0.3 2,527,689 - -0.4 2,527,740 - -0.1 2,527,740 - -1.8 2,527,873 - CA264_10960 0.31 +1.1 2,527,885 + CA264_10960 0.34 +0.7 2,527,885 + CA264_10960 0.34 +1.0 2,527,886 - CA264_10960 0.34 -0.9 2,527,937 - CA264_10960 0.46 -0.5 2,527,937 - CA264_10960 0.46 +0.1 2,527,937 - CA264_10960 0.46 -0.0 2,527,956 + CA264_10960 0.50 -0.1 2,527,956 + CA264_10960 0.50 +1.2 2,527,956 + CA264_10960 0.50 -0.5 2,527,956 + CA264_10960 0.50 +0.3 2,527,982 + CA264_10960 0.56 -0.2 2,527,982 + CA264_10960 0.56 -1.6 2,527,986 + CA264_10960 0.57 +0.1
Or see this region's nucleotide sequence