Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10120 and CA264_10125 are separated by 513 nucleotides CA264_10125 and CA264_10130 are separated by 317 nucleotides
CA264_10120: CA264_10120 - hypothetical protein, at 2,347,095 to 2,347,814
_10120
CA264_10125: CA264_10125 - hypothetical protein, at 2,348,328 to 2,349,182
_10125
CA264_10130: CA264_10130 - TonB-dependent receptor, at 2,349,500 to 2,351,926
_10130
Position (kb)
2348
2349
2350 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2347.331 kb on - strand, within CA264_10120 at 2347.407 kb on + strand, within CA264_10120 at 2347.407 kb on + strand, within CA264_10120 at 2347.561 kb on + strand, within CA264_10120 at 2347.710 kb on - strand, within CA264_10120 at 2347.710 kb on - strand, within CA264_10120 at 2347.710 kb on - strand, within CA264_10120 at 2347.710 kb on - strand, within CA264_10120 at 2347.759 kb on + strand at 2347.760 kb on - strand at 2347.760 kb on - strand at 2347.772 kb on + strand at 2347.772 kb on + strand at 2347.805 kb on + strand at 2347.805 kb on + strand at 2347.806 kb on - strand at 2347.808 kb on + strand at 2347.808 kb on + strand at 2347.809 kb on - strand at 2347.815 kb on - strand at 2347.815 kb on - strand at 2347.825 kb on + strand at 2347.825 kb on + strand at 2347.909 kb on + strand at 2347.909 kb on + strand at 2347.935 kb on + strand at 2347.967 kb on + strand at 2347.976 kb on + strand at 2347.977 kb on - strand at 2348.028 kb on - strand at 2348.207 kb on - strand at 2348.240 kb on + strand at 2348.241 kb on - strand at 2348.241 kb on - strand at 2348.241 kb on - strand at 2348.241 kb on - strand at 2348.241 kb on - strand at 2348.241 kb on - strand at 2348.284 kb on - strand at 2348.312 kb on + strand at 2348.313 kb on - strand at 2348.369 kb on - strand at 2348.414 kb on + strand, within CA264_10125 at 2348.414 kb on + strand, within CA264_10125 at 2348.415 kb on - strand, within CA264_10125 at 2348.452 kb on + strand, within CA264_10125 at 2348.452 kb on + strand, within CA264_10125 at 2348.452 kb on + strand, within CA264_10125 at 2348.453 kb on - strand, within CA264_10125 at 2348.502 kb on + strand, within CA264_10125 at 2348.503 kb on - strand, within CA264_10125 at 2348.542 kb on + strand, within CA264_10125 at 2348.581 kb on + strand, within CA264_10125 at 2348.581 kb on + strand, within CA264_10125 at 2348.602 kb on + strand, within CA264_10125 at 2348.602 kb on + strand, within CA264_10125 at 2348.602 kb on + strand, within CA264_10125 at 2348.602 kb on + strand, within CA264_10125 at 2348.708 kb on - strand, within CA264_10125 at 2348.776 kb on + strand, within CA264_10125 at 2348.817 kb on - strand, within CA264_10125 at 2348.843 kb on + strand, within CA264_10125 at 2348.884 kb on + strand, within CA264_10125 at 2348.884 kb on + strand, within CA264_10125 at 2348.885 kb on - strand, within CA264_10125 at 2348.998 kb on + strand, within CA264_10125 at 2349.119 kb on + strand at 2349.142 kb on - strand at 2349.146 kb on + strand at 2349.146 kb on + strand at 2349.147 kb on - strand at 2349.147 kb on - strand at 2349.147 kb on - strand at 2349.182 kb on + strand at 2349.182 kb on + strand at 2349.183 kb on - strand at 2349.183 kb on - strand at 2349.183 kb on - strand at 2349.183 kb on - strand at 2349.183 kb on - strand at 2349.186 kb on + strand at 2349.187 kb on - strand at 2349.187 kb on - strand at 2349.187 kb on - strand at 2349.187 kb on - strand at 2349.201 kb on - strand at 2349.201 kb on - strand at 2349.226 kb on + strand at 2349.227 kb on - strand at 2349.286 kb on + strand at 2349.286 kb on + strand at 2349.296 kb on - strand at 2349.300 kb on + strand at 2349.300 kb on + strand at 2349.300 kb on + strand at 2349.318 kb on - strand at 2349.388 kb on - strand at 2349.397 kb on + strand at 2349.398 kb on - strand at 2349.398 kb on - strand at 2349.422 kb on + strand at 2349.484 kb on + strand at 2349.485 kb on - strand at 2349.485 kb on - strand at 2349.485 kb on - strand at 2349.594 kb on - strand at 2349.618 kb on + strand at 2349.619 kb on - strand at 2349.647 kb on + strand at 2349.680 kb on - strand at 2349.683 kb on + strand at 2349.685 kb on + strand at 2349.685 kb on + strand at 2349.685 kb on + strand at 2349.760 kb on + strand, within CA264_10130 at 2349.915 kb on + strand, within CA264_10130 at 2349.916 kb on - strand, within CA264_10130 at 2349.916 kb on - strand, within CA264_10130 at 2349.916 kb on - strand, within CA264_10130 at 2349.934 kb on + strand, within CA264_10130 at 2349.944 kb on - strand, within CA264_10130 at 2349.944 kb on - strand, within CA264_10130 at 2349.988 kb on + strand, within CA264_10130 at 2349.989 kb on - strand, within CA264_10130 at 2350.031 kb on + strand, within CA264_10130 at 2350.031 kb on + strand, within CA264_10130 at 2350.031 kb on + strand, within CA264_10130 at 2350.031 kb on + strand, within CA264_10130 at 2350.032 kb on - strand, within CA264_10130 at 2350.032 kb on - strand, within CA264_10130 at 2350.033 kb on + strand, within CA264_10130 at 2350.034 kb on - strand, within CA264_10130 at 2350.111 kb on + strand, within CA264_10130 at 2350.113 kb on + strand, within CA264_10130 at 2350.166 kb on + strand, within CA264_10130
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 2,347,331 - CA264_10120 0.33 -0.8 2,347,407 + CA264_10120 0.43 -1.1 2,347,407 + CA264_10120 0.43 +0.4 2,347,561 + CA264_10120 0.65 -0.0 2,347,710 - CA264_10120 0.85 -0.8 2,347,710 - CA264_10120 0.85 +1.3 2,347,710 - CA264_10120 0.85 +0.1 2,347,710 - CA264_10120 0.85 +0.2 2,347,759 + +1.0 2,347,760 - -1.8 2,347,760 - -0.2 2,347,772 + +0.0 2,347,772 + -0.9 2,347,805 + +0.1 2,347,805 + -0.4 2,347,806 - -0.6 2,347,808 + -0.6 2,347,808 + -0.6 2,347,809 - +1.0 2,347,815 - -0.1 2,347,815 - +0.5 2,347,825 + +4.3 2,347,825 + +0.0 2,347,909 + +0.4 2,347,909 + -0.5 2,347,935 + -0.2 2,347,967 + -0.1 2,347,976 + -0.7 2,347,977 - -2.1 2,348,028 - -0.1 2,348,207 - +0.2 2,348,240 + +0.6 2,348,241 - +0.2 2,348,241 - +1.0 2,348,241 - -1.2 2,348,241 - +0.7 2,348,241 - -0.0 2,348,241 - -0.4 2,348,284 - -0.4 2,348,312 + -0.8 2,348,313 - +1.8 2,348,369 - -0.2 2,348,414 + CA264_10125 0.10 -0.3 2,348,414 + CA264_10125 0.10 -0.9 2,348,415 - CA264_10125 0.10 +0.7 2,348,452 + CA264_10125 0.15 +0.5 2,348,452 + CA264_10125 0.15 +0.1 2,348,452 + CA264_10125 0.15 -0.2 2,348,453 - CA264_10125 0.15 -0.3 2,348,502 + CA264_10125 0.20 +0.3 2,348,503 - CA264_10125 0.20 -1.4 2,348,542 + CA264_10125 0.25 +0.2 2,348,581 + CA264_10125 0.30 -0.4 2,348,581 + CA264_10125 0.30 +0.2 2,348,602 + CA264_10125 0.32 +0.4 2,348,602 + CA264_10125 0.32 +0.5 2,348,602 + CA264_10125 0.32 +0.6 2,348,602 + CA264_10125 0.32 +0.0 2,348,708 - CA264_10125 0.44 -0.1 2,348,776 + CA264_10125 0.52 +1.4 2,348,817 - CA264_10125 0.57 -0.6 2,348,843 + CA264_10125 0.60 +1.4 2,348,884 + CA264_10125 0.65 +1.0 2,348,884 + CA264_10125 0.65 +2.0 2,348,885 - CA264_10125 0.65 -0.2 2,348,998 + CA264_10125 0.78 -0.2 2,349,119 + -0.9 2,349,142 - +0.2 2,349,146 + -0.2 2,349,146 + -0.8 2,349,147 - -0.2 2,349,147 - +0.4 2,349,147 - -0.3 2,349,182 + -0.8 2,349,182 + +0.1 2,349,183 - -0.1 2,349,183 - -0.6 2,349,183 - -0.2 2,349,183 - +0.3 2,349,183 - -0.2 2,349,186 + -0.0 2,349,187 - +1.1 2,349,187 - -0.4 2,349,187 - +0.1 2,349,187 - -0.2 2,349,201 - +0.7 2,349,201 - -0.2 2,349,226 + -0.1 2,349,227 - -0.0 2,349,286 + -0.3 2,349,286 + +0.3 2,349,296 - +0.8 2,349,300 + +0.9 2,349,300 + +0.3 2,349,300 + -0.4 2,349,318 - +0.2 2,349,388 - +0.1 2,349,397 + -0.6 2,349,398 - +0.5 2,349,398 - -1.0 2,349,422 + -0.4 2,349,484 + +0.1 2,349,485 - +0.5 2,349,485 - +0.0 2,349,485 - -1.8 2,349,594 - -0.0 2,349,618 + +0.6 2,349,619 - +0.2 2,349,647 + +0.0 2,349,680 - -0.0 2,349,683 + +0.0 2,349,685 + -0.1 2,349,685 + -0.0 2,349,685 + -0.9 2,349,760 + CA264_10130 0.11 -0.1 2,349,915 + CA264_10130 0.17 -1.1 2,349,916 - CA264_10130 0.17 +1.0 2,349,916 - CA264_10130 0.17 -0.9 2,349,916 - CA264_10130 0.17 -1.5 2,349,934 + CA264_10130 0.18 +1.3 2,349,944 - CA264_10130 0.18 +0.8 2,349,944 - CA264_10130 0.18 -0.9 2,349,988 + CA264_10130 0.20 -0.1 2,349,989 - CA264_10130 0.20 +0.9 2,350,031 + CA264_10130 0.22 -0.1 2,350,031 + CA264_10130 0.22 -0.8 2,350,031 + CA264_10130 0.22 +0.5 2,350,031 + CA264_10130 0.22 +0.7 2,350,032 - CA264_10130 0.22 -0.3 2,350,032 - CA264_10130 0.22 -1.5 2,350,033 + CA264_10130 0.22 +0.7 2,350,034 - CA264_10130 0.22 -0.7 2,350,111 + CA264_10130 0.25 +0.1 2,350,113 + CA264_10130 0.25 -0.2 2,350,166 + CA264_10130 0.27 -0.4
Or see this region's nucleotide sequence