Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_09975

Experiment: m.b. Chlorite 0.08 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_09970 and CA264_09975 are separated by 12 nucleotidesCA264_09975 and CA264_09980 are separated by 19 nucleotidesCA264_09980 and CA264_09985 are separated by 46 nucleotides CA264_09970: CA264_09970 - conjugal transfer protein TraG, at 2,320,400 to 2,322,910 _09970 CA264_09975: CA264_09975 - hypothetical protein, at 2,322,923 to 2,323,270 _09975 CA264_09980: CA264_09980 - carbamoyl phosphate synthetase, at 2,323,290 to 2,323,598 _09980 CA264_09985: CA264_09985 - hypothetical protein, at 2,323,645 to 2,324,124 _09985 Position (kb) 2322 2323 2324Strain fitness (log2 ratio) -2 -1 0 1 2at 2321.936 kb on + strand, within CA264_09970at 2321.944 kb on + strand, within CA264_09970at 2322.207 kb on + strand, within CA264_09970at 2322.550 kb on + strand, within CA264_09970at 2322.551 kb on - strand, within CA264_09970at 2322.551 kb on - strand, within CA264_09970at 2322.589 kb on + strand, within CA264_09970at 2322.591 kb on + strand, within CA264_09970at 2322.591 kb on + strand, within CA264_09970at 2322.592 kb on - strand, within CA264_09970at 2322.684 kb on + strandat 2322.896 kb on + strandat 2322.925 kb on - strandat 2322.927 kb on + strandat 2322.927 kb on + strandat 2322.928 kb on - strandat 2323.052 kb on - strand, within CA264_09975at 2323.195 kb on + strand, within CA264_09975at 2323.196 kb on - strand, within CA264_09975at 2323.198 kb on - strand, within CA264_09975at 2323.252 kb on + strandat 2323.252 kb on + strandat 2323.253 kb on - strandat 2323.311 kb on - strandat 2323.332 kb on + strand, within CA264_09980at 2323.333 kb on - strand, within CA264_09980at 2323.451 kb on - strand, within CA264_09980at 2323.503 kb on + strand, within CA264_09980at 2323.503 kb on + strand, within CA264_09980at 2323.653 kb on + strandat 2323.747 kb on + strand, within CA264_09985at 2323.781 kb on + strand, within CA264_09985at 2324.057 kb on - strand, within CA264_09985at 2324.198 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM
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2,321,936 + CA264_09970 0.61 -0.4
2,321,944 + CA264_09970 0.61 +0.2
2,322,207 + CA264_09970 0.72 -0.1
2,322,550 + CA264_09970 0.86 +0.5
2,322,551 - CA264_09970 0.86 -0.4
2,322,551 - CA264_09970 0.86 -0.2
2,322,589 + CA264_09970 0.87 +0.0
2,322,591 + CA264_09970 0.87 +0.9
2,322,591 + CA264_09970 0.87 -0.7
2,322,592 - CA264_09970 0.87 -0.7
2,322,684 + +0.1
2,322,896 + -1.0
2,322,925 - -1.6
2,322,927 + +1.1
2,322,927 + -0.3
2,322,928 - -2.1
2,323,052 - CA264_09975 0.37 -0.2
2,323,195 + CA264_09975 0.78 +0.0
2,323,196 - CA264_09975 0.78 +1.3
2,323,198 - CA264_09975 0.79 -0.9
2,323,252 + -0.1
2,323,252 + +1.8
2,323,253 - -0.2
2,323,311 - -0.7
2,323,332 + CA264_09980 0.14 -0.1
2,323,333 - CA264_09980 0.14 -0.6
2,323,451 - CA264_09980 0.52 -0.7
2,323,503 + CA264_09980 0.69 -0.7
2,323,503 + CA264_09980 0.69 -0.1
2,323,653 + -0.9
2,323,747 + CA264_09985 0.21 -0.3
2,323,781 + CA264_09985 0.28 +0.4
2,324,057 - CA264_09985 0.86 -0.9
2,324,198 + -1.6

Or see this region's nucleotide sequence