Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09430 and CA264_09435 are separated by 1 nucleotides CA264_09435 and CA264_09440 overlap by 1 nucleotides CA264_09440 and CA264_09445 overlap by 13 nucleotides
CA264_09430: CA264_09430 - 2-isopropylmalate synthase, at 2,203,949 to 2,205,115
_09430
CA264_09435: CA264_09435 - 3-isopropylmalate dehydratase large subunit, at 2,205,117 to 2,206,511
_09435
CA264_09440: CA264_09440 - 3-isopropylmalate dehydratase small subunit, at 2,206,511 to 2,207,107
_09440
CA264_09445: CA264_09445 - 3-isopropylmalate dehydrogenase, at 2,207,095 to 2,208,216
_09445
Position (kb)
2205
2206
2207 Strain fitness (log2 ratio)
-2
-1
0
1 at 2204.271 kb on + strand, within CA264_09430 at 2204.271 kb on + strand, within CA264_09430 at 2204.272 kb on - strand, within CA264_09430 at 2204.290 kb on + strand, within CA264_09430 at 2204.455 kb on - strand, within CA264_09430 at 2204.489 kb on + strand, within CA264_09430 at 2204.513 kb on + strand, within CA264_09430 at 2204.708 kb on + strand, within CA264_09430 at 2204.879 kb on + strand, within CA264_09430 at 2204.915 kb on - strand, within CA264_09430 at 2204.985 kb on - strand, within CA264_09430 at 2205.011 kb on - strand at 2205.017 kb on + strand at 2205.018 kb on - strand at 2205.192 kb on + strand at 2205.220 kb on + strand at 2205.220 kb on + strand at 2205.365 kb on - strand, within CA264_09435 at 2205.393 kb on + strand, within CA264_09435 at 2205.394 kb on - strand, within CA264_09435 at 2205.426 kb on + strand, within CA264_09435 at 2205.449 kb on - strand, within CA264_09435 at 2205.449 kb on - strand, within CA264_09435 at 2205.512 kb on + strand, within CA264_09435 at 2205.513 kb on - strand, within CA264_09435 at 2205.562 kb on + strand, within CA264_09435 at 2205.764 kb on + strand, within CA264_09435 at 2205.765 kb on - strand, within CA264_09435 at 2205.787 kb on + strand, within CA264_09435 at 2205.787 kb on + strand, within CA264_09435 at 2205.814 kb on + strand, within CA264_09435 at 2205.912 kb on + strand, within CA264_09435 at 2205.913 kb on - strand, within CA264_09435 at 2205.941 kb on - strand, within CA264_09435 at 2205.984 kb on + strand, within CA264_09435 at 2205.985 kb on - strand, within CA264_09435 at 2205.985 kb on - strand, within CA264_09435 at 2206.081 kb on - strand, within CA264_09435 at 2206.081 kb on - strand, within CA264_09435 at 2206.128 kb on + strand, within CA264_09435 at 2206.129 kb on - strand, within CA264_09435 at 2206.129 kb on - strand, within CA264_09435 at 2206.253 kb on - strand, within CA264_09435 at 2206.289 kb on - strand, within CA264_09435 at 2206.289 kb on - strand, within CA264_09435 at 2206.289 kb on - strand, within CA264_09435 at 2206.510 kb on - strand at 2206.571 kb on - strand, within CA264_09440 at 2206.582 kb on + strand, within CA264_09440 at 2206.583 kb on - strand, within CA264_09440 at 2206.583 kb on - strand, within CA264_09440 at 2206.583 kb on - strand, within CA264_09440 at 2206.584 kb on + strand, within CA264_09440 at 2206.584 kb on + strand, within CA264_09440 at 2206.652 kb on + strand, within CA264_09440 at 2206.703 kb on + strand, within CA264_09440 at 2206.870 kb on - strand, within CA264_09440 at 2206.930 kb on + strand, within CA264_09440 at 2206.935 kb on + strand, within CA264_09440 at 2206.935 kb on + strand, within CA264_09440 at 2206.936 kb on - strand, within CA264_09440 at 2207.003 kb on + strand, within CA264_09440 at 2207.003 kb on + strand, within CA264_09440 at 2207.004 kb on - strand, within CA264_09440 at 2207.078 kb on + strand at 2207.106 kb on - strand at 2207.338 kb on + strand, within CA264_09445 at 2207.346 kb on + strand, within CA264_09445 at 2207.437 kb on + strand, within CA264_09445
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 2,204,271 + CA264_09430 0.28 +0.1 2,204,271 + CA264_09430 0.28 -0.7 2,204,272 - CA264_09430 0.28 +0.2 2,204,290 + CA264_09430 0.29 -1.4 2,204,455 - CA264_09430 0.43 -1.6 2,204,489 + CA264_09430 0.46 -0.1 2,204,513 + CA264_09430 0.48 +0.2 2,204,708 + CA264_09430 0.65 -0.1 2,204,879 + CA264_09430 0.80 +0.5 2,204,915 - CA264_09430 0.83 +0.0 2,204,985 - CA264_09430 0.89 -1.2 2,205,011 - -0.3 2,205,017 + -0.7 2,205,018 - -0.5 2,205,192 + -0.4 2,205,220 + +1.5 2,205,220 + -0.2 2,205,365 - CA264_09435 0.18 -0.2 2,205,393 + CA264_09435 0.20 +0.9 2,205,394 - CA264_09435 0.20 +0.5 2,205,426 + CA264_09435 0.22 +0.2 2,205,449 - CA264_09435 0.24 -0.4 2,205,449 - CA264_09435 0.24 -0.5 2,205,512 + CA264_09435 0.28 +0.4 2,205,513 - CA264_09435 0.28 -0.6 2,205,562 + CA264_09435 0.32 -0.1 2,205,764 + CA264_09435 0.46 -1.2 2,205,765 - CA264_09435 0.46 -2.1 2,205,787 + CA264_09435 0.48 -0.4 2,205,787 + CA264_09435 0.48 -0.3 2,205,814 + CA264_09435 0.50 -0.5 2,205,912 + CA264_09435 0.57 -0.4 2,205,913 - CA264_09435 0.57 -0.2 2,205,941 - CA264_09435 0.59 -1.1 2,205,984 + CA264_09435 0.62 -0.4 2,205,985 - CA264_09435 0.62 -0.5 2,205,985 - CA264_09435 0.62 -1.3 2,206,081 - CA264_09435 0.69 -0.1 2,206,081 - CA264_09435 0.69 -0.1 2,206,128 + CA264_09435 0.72 -0.2 2,206,129 - CA264_09435 0.73 -0.7 2,206,129 - CA264_09435 0.73 -0.3 2,206,253 - CA264_09435 0.81 -0.9 2,206,289 - CA264_09435 0.84 +0.6 2,206,289 - CA264_09435 0.84 +0.3 2,206,289 - CA264_09435 0.84 +0.5 2,206,510 - -0.2 2,206,571 - CA264_09440 0.10 +0.2 2,206,582 + CA264_09440 0.12 +0.1 2,206,583 - CA264_09440 0.12 +0.2 2,206,583 - CA264_09440 0.12 +0.4 2,206,583 - CA264_09440 0.12 +0.8 2,206,584 + CA264_09440 0.12 +0.3 2,206,584 + CA264_09440 0.12 -0.3 2,206,652 + CA264_09440 0.24 -0.1 2,206,703 + CA264_09440 0.32 -0.0 2,206,870 - CA264_09440 0.60 -0.6 2,206,930 + CA264_09440 0.70 -0.0 2,206,935 + CA264_09440 0.71 +1.0 2,206,935 + CA264_09440 0.71 -0.0 2,206,936 - CA264_09440 0.71 -0.5 2,207,003 + CA264_09440 0.82 -0.6 2,207,003 + CA264_09440 0.82 -0.8 2,207,004 - CA264_09440 0.83 -0.2 2,207,078 + -1.2 2,207,106 - +0.1 2,207,338 + CA264_09445 0.22 +0.1 2,207,346 + CA264_09445 0.22 +0.5 2,207,437 + CA264_09445 0.30 -1.2
Or see this region's nucleotide sequence